Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun8g00978 ATGTCATTGGTTATGTCTACAGAGTTGGCTGATGCATCATATAGGAATGCCAAGCTCTACACACTAAAGGGAACTGATGTTACACCTGATCTGTCCTCCCACAATTTTGTTCCAGATAAGCACAGAAACATGTATATCACAGATTCTTACTCCAGTGAGAGTTATGAAAAGTATTTCCGTGATTCACCATCAGAAGAACTGATAGAACCGTCTAGTTCCAGCATATCAGGAAACTCAGTTCACCCTGATGGTGCCTCTTCTTACCTTCTTAGAGCTAGTTCAGGAGCTTCTGTGATTGTTAATAACCCATTTGACAGTCGTATTCTGTCTACAAGGCGTCACAACAATGTCTATCAGTCCAGTTTTGAATCAGATTTTGTGGAAAATAGGAGCCCTGATGGCCTTGACTTTGATGGTGAAATGAGATTAAAACTACAAGAATTGGAGAGGGCTTTGTTTTCTGATGAAGAAGAGGAGGAGGAAGACATATTTGAGACTGTCCAAAGCATGGACATTGATCCTGACATGGCCGAGTGGGCCAATCCGCTTCAAGATATGCTACTTCATGACTCACCCAAGGAGTCCTCATCCTCAGATTCTTCCAATATTAGCAGCATAAGTAGCACCACCAAAGAAACTTCACAGAACTCACCCCAGACTCCCAAACAATTACTCTATGAATGTGCTAGAGCGCTTTCAGAAGGAAATGAAGAGCAAGCCACATCTATGATAAACAATCTCAGGCAAATGGTCTCGATTCAAGGGGAACCTTCTCAAAGAATTGCAGCCTACATGGTGGAAGGGCTTGCAGCTCGCGTTGCTTCATCCGGAAAATGCATCTATCAAGCATTGAGATGCAAAGAACCTCCTTCTTCGGATCGTCTGGCAGCTATGCAGATACTATTTGAGATCTGCCCGTGTTTTAAATTCGGATTCATCGCTGCAAATGGTGCGATAGTTGAGGCCGTCAGAGATGAAAAGAAGGTTCACATAATAGACTTTGACATCAGCCAAGGAACTCAGTACATAACTCTAATACAAGCACTTGCTGCAATGCCAGGTAGGCGACCTCATGTGAGATTAACCGGGGTGGATGATCCTGAGACTGTGCAGCGCTCCGTTGGCGGCATGAACATCATAGGAAAAAGGCTTGAAAAGCTGGCAGAGGAACTTGGATTGCCATTTGAGTTTCGAGCAGTGGCTTCAAAGACCTCAATTGTCTCACCATCAATGCTCAATTGTCGTCCGGGGGAAGCACTTGTGGTGAACTTTGCATTCCAGCTTCATCACATGCGTGATGAAACTGTATCCACAGTGAACGAGAGAGACCAACTTCTTCGCATGGTGAAGTGCTTGAATCCAAAACTTGTGACAATTGTGGAGCAGGACATGAACACCAACACCTCCCCTTTTCTCCAAAGATTTGTTGAAGCATACAATTACTACTCTGCTGTGTTTGACACTCTTGATGCAACTCTACCTAGGGAGAGCCAGGACAGGATGAATGTTGAAAGGCAGTGCTTGGCAAAGGACATTGTCAACATTGTGGCTTGCGAGGGCGAGGATCGGATAGAACGGTACGAAGTCGCCGGAAAATGGAGGGCAAGGTTGACCATGGCTGGCTTCACTCCATCTCCAATCAGCACAAATGTTAGAGAAGCAATTAGGAAACTCATTATTAAGCAGTACTGTGACAGGTTCAAGATAAAGGAGGAAATGGGAGCACTTCATTTTGGGTGGGAAGACAAAAACTTGATTGTTACTTCAGCATGGAAGTGA 1779 0.4452 MSLVMSTELADASYRNAKLYTLKGTDVTPDLSSHNFVPDKHRNMYITDSYSSESYEKYFRDSPSEELIEPSSSSISGNSVHPDGASSYLLRASSGASVIVNNPFDSRILSTRRHNNVYQSSFESDFVENRSPDGLDFDGEMRLKLQELERALFSDEEEEEEDIFETVQSMDIDPDMAEWANPLQDMLLHDSPKESSSSDSSNISSISSTTKETSQNSPQTPKQLLYECARALSEGNEEQATSMINNLRQMVSIQGEPSQRIAAYMVEGLAARVASSGKCIYQALRCKEPPSSDRLAAMQILFEICPCFKFGFIAANGAIVEAVRDEKKVHIIDFDISQGTQYITLIQALAAMPGRRPHVRLTGVDDPETVQRSVGGMNIIGKRLEKLAEELGLPFEFRAVASKTSIVSPSMLNCRPGEALVVNFAFQLHHMRDETVSTVNERDQLLRMVKCLNPKLVTIVEQDMNTNTSPFLQRFVEAYNYYSAVFDTLDATLPRESQDRMNVERQCLAKDIVNIVACEGEDRIERYEVAGKWRARLTMAGFTPSPISTNVREAIRKLIIKQYCDRFKIKEEMGALHFGWEDKNLIVTSAWK 592
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun8g00978 592 MobiDBLite consensus disorder prediction 61 80 - -
Viun8g00978 592 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 202 587 IPR005202 -
Viun8g00978 592 MobiDBLite consensus disorder prediction 190 221 - -
Viun8g00978 592 MobiDBLite consensus disorder prediction 188 221 - -
Viun8g00978 592 ProSiteProfiles GRAS family profile. 212 592 IPR005202 -
Viun8g00978 592 Pfam GRAS domain family 222 592 IPR005202 -
Viun8g00978 592 MobiDBLite consensus disorder prediction 66 80 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun8g00978 Viun-Chr8 10807926 10811583 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun8g00978 1 592 GRAS Transcription Factor Family AT1G21450 60.601 0.0 696
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Viun8g00978 GRAS 1.6e-134 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun8g00978 - - gmx:100807048 993.03
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun8g00978 8 10807926 10811583 Viun8g00978 8 10807926 10811583 ECH
Viun8g00978 8 10807926 10811583 Viun9g02287 9 32263950 32267558 PCT