Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun8g00974 ATGGTTCCTCCTGGGCCCCCTACGCCTCTTGGTGCCCAGTCTGTGCCGTCACTTTTGAGATCGAATTCCGGAATGTTGGGGGGTCAAGGCGGCCCTGTGCCTTCACAAACTTCGTTCCCTTCGCTGGTTGCGCAGCGAAACCAGTTTAACAACATGAACATGATAGGTAATATGTCTAATGTAACTTCCTTACTGAATCAGTCTTTTCCGAATGGAATTCCGAATTCTGGACTAGCTGGCCATGGGAGTAGCCAGCGCGGTGGAGGTGTTGATGCTGGGGCGGAATCAGATCCGCTGTCTGGTGTTGGCAGTGGAATCAATTTTGGTAATACTTTGCAATCGAATTTGGGTAACCCGGGTTCATCCGGTCAGGGTCAGGGTCAACAATTTTCAAATGCTTCTGGTAACCAGATGATGTCAGATCAACAGCATTCCCAGCAACTCGAACTTCAGAGTTTTCAGCATAGTCAACAATCAATGCAACAGTTCTCTGCTCCTCTGAACGCTCAGCAGCAACAGCATTTTCAGTCAATTCGTGGTGGAATGGGTGGTGTTGGCTCGGTTAAGTTGGAGCCACAGGTAAACAACGATCAGTTTGGGCAGCAGCAGCAGCAATTGCCCTCAAGGAATCTTGCTCAGGTGAAGTTGGAACCACAGCAGCTTCAAACAATGAGAAACATGGCAGCAGTAAAAATGGAGCCTCAACATACTGATCAGCAGTTTTTGCATCAGCAGCAACAACAACAGCAGCAACAGCAGCAGCAACAACAACTTCTCCACATGTCAAGGCAATCCTCTCAGGCTGCTGCTGCTCAGATGAATCATCTTTTGCAACAGCAGAGACTTTTGCAATATCAACAACATCAGCAGCAGCAACAGCAACAACAGCAACTCTTGAAGGCAATGCCTCAACAACGACCCCATCTACCGCAGCAGTTTCAACAGCAGAATTTGCGGTCTCCTGTGAAGCCACCTTATGAACCTGGAATGTGTGCTAGGCGGCTGACCCATTACATGTATCAGCAACAGCATAGACCTGAAGATAATAACATTGAATTCTGGAGGAAGTTTGTTGCTGAGTATTTTGCTCCGAATGCCAAAAAGAAGTGGTGTGTTTCCATGTATGGAAGTGGCAGACAAACTACTGGAGTTTTCCCTCAGGATGTATGGCACTGTGAAATATGTAATCGCAAACCTGGCCGTGGATTTGAAGCAACTGCCGAGGTTCTTCCCAGGCTTTTCAAAATAAAGTATGAAAGTGGTACTCTGGAAGAGCTCCTTTATGTTGACATGCCTCGAGAATACCATAATTCCTCTGGACAGATTGTCTTAGATTATGCAAAGGCAATACAAGAAAGTGTTTTTGAGCAACTTCGTGTTGTTCGTGATGGTCAGCTTCGAATAGTTTTTTCTCCAGACCTGAAGATATGCTCTTGGGAATTTTGTGCTCGGCGACATGAAGAGCTCATTCCTAGACGACTGTTAATACCTCAGATTAGTCAGCTTGGAGCAGTTGCTCAAAAATACCAGGCAATTACTCAAAATGCGACACCCAATTTATCGGTTCCAGAGTTACAAAGTAATTGCAATATGTTTGTTGCATCAGCCCGTCAGTTGGCAAAAGCTTTGGAAGTTCCATTGGTCAATGATTTAGGATATACTAAGAGATATGTGCGGTGCCTTCAGATATCAGAAGTGGTAAATAGTATGAAAGACTTGATAGATTATAGCAGAGAAACGCGAACTGGACCCATGGACAGCTTAGCAAAATTCCCTCGGAGAACAAGTGGTTCATCTGGACTTCATAGTCAGGCACAACAGTCTGAAGATCATATGCAGCAGCAGTCACAGCCTCAGCAGCCACTCCCGCATATGGTTCCCCATACTTCAAATGGTGATCAAAATTCTGTGCAAACTGCTGCGATGCAGATTACTTCTACCAATGGTGTGACAAATGTAAATAATTCTGTGAATGCAGCATCTGCATCAACCACCACAAGCACCATTGTTGGACTTCTCCACCAGAATTCTGTGAATTCTAGACAAAATTCAATGAACAATGCAAGCAGCCCTTATGGGGGTAGTTCTGTTCAAATTCCATCCCCAGGTTCGTCTGGTAATGTTCCACAAGCGCAGCCAAATGCATCCCCTTTTCAATCACCCACACCATCCTCATCTAACAATCCACAAACATCTCATCAAGCATTAACTTCTGCAAACCACATGGGTACGGCAAATTCACCAGCCAATATTCCCTTGCAACAACAACAGACTTCTCTCCCTGCTGAAGCTGACACAACGGATGCCCAGAGCTCAGTCCAGAAAATCATTCATGAGATGATGATGTCCTCCCAGATGAACGGCCCAGGTGGAATGGCCGGTGCTGGTTCTCTTGGAAACGACATGAAAAATGTAAATGGGATTCTACCAGGGAGTAACAATAACGGTGGGCTTGTGGGTAATGGGGCTGTGAACAGTAATTCAGGTGTTGGGGTTGGTGGTTATGGCACAATGGGTCTTGGTCCATCTGGTATGAGCAATGGAATGAGACCTGTAATGGGACATAATTCCATGATGAATGGAAGGGGAGGACTGGCATCTCTTGCACGGGAGCAAGTTATGAATCAGCAGGACTTATCAACCCAACTACTTAGTGGGCTAGGAGCAGTAAATGGCTTTAATAATCTTCAATTTGATTGGAAACCATCTCCATGA 2715 0.456 MVPPGPPTPLGAQSVPSLLRSNSGMLGGQGGPVPSQTSFPSLVAQRNQFNNMNMIGNMSNVTSLLNQSFPNGIPNSGLAGHGSSQRGGGVDAGAESDPLSGVGSGINFGNTLQSNLGNPGSSGQGQGQQFSNASGNQMMSDQQHSQQLELQSFQHSQQSMQQFSAPLNAQQQQHFQSIRGGMGGVGSVKLEPQVNNDQFGQQQQQLPSRNLAQVKLEPQQLQTMRNMAAVKMEPQHTDQQFLHQQQQQQQQQQQQQQLLHMSRQSSQAAAAQMNHLLQQQRLLQYQQHQQQQQQQQQLLKAMPQQRPHLPQQFQQQNLRSPVKPPYEPGMCARRLTHYMYQQQHRPEDNNIEFWRKFVAEYFAPNAKKKWCVSMYGSGRQTTGVFPQDVWHCEICNRKPGRGFEATAEVLPRLFKIKYESGTLEELLYVDMPREYHNSSGQIVLDYAKAIQESVFEQLRVVRDGQLRIVFSPDLKICSWEFCARRHEELIPRRLLIPQISQLGAVAQKYQAITQNATPNLSVPELQSNCNMFVASARQLAKALEVPLVNDLGYTKRYVRCLQISEVVNSMKDLIDYSRETRTGPMDSLAKFPRRTSGSSGLHSQAQQSEDHMQQQSQPQQPLPHMVPHTSNGDQNSVQTAAMQITSTNGVTNVNNSVNAASASTTTSTIVGLLHQNSVNSRQNSMNNASSPYGGSSVQIPSPGSSGNVPQAQPNASPFQSPTPSSSNNPQTSHQALTSANHMGTANSPANIPLQQQQTSLPAEADTTDAQSSVQKIIHEMMMSSQMNGPGGMAGAGSLGNDMKNVNGILPGSNNNGGLVGNGAVNSNSGVGVGGYGTMGLGPSGMSNGMRPVMGHNSMMNGRGGLASLAREQVMNQQDLSTQLLSGLGAVNGFNNLQFDWKPSP 904
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun8g00974 904 MobiDBLite consensus disorder prediction 232 267 - -
Viun8g00974 904 MobiDBLite consensus disorder prediction 1 39 - -
Viun8g00974 904 MobiDBLite consensus disorder prediction 103 162 - -
Viun8g00974 904 MobiDBLite consensus disorder prediction 294 321 - -
Viun8g00974 904 MobiDBLite consensus disorder prediction 294 326 - -
Viun8g00974 904 MobiDBLite consensus disorder prediction 680 734 - -
Viun8g00974 904 MobiDBLite consensus disorder prediction 582 635 - -
Viun8g00974 904 Pfam LIM-domain binding protein 334 588 IPR029005 -
Viun8g00974 904 PANTHER LIM DOMAIN-BINDING PROTEIN 230 893 IPR029005 -
Viun8g00974 904 MobiDBLite consensus disorder prediction 14 39 - -
Viun8g00974 904 MobiDBLite consensus disorder prediction 75 162 - -
Viun8g00974 904 MobiDBLite consensus disorder prediction 592 635 - -
Viun8g00974 904 MobiDBLite consensus disorder prediction 237 267 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun8g00974 Viun-Chr8 10651796 10662329 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun8g00974 1 900 C2H2 Transcription Factor Family AT1G43850 58.936 0.0 756
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun8g00974 - - gmx:100798031 1365.52