Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun8g00973 ATGGTTCCTCCTGGGCCCCCTACGCCTCTTGGTGCCCAGTCTGTGCCGTCACTTTTGAGATCGAATTCCGGAATGTTGGGGGGTCAAGGCGGCCCTGTGCCTTCACAAACTTCGTTCCCTTCGCTGGTTGCGCAGCGAAACCAGTTTAACAACATGAACATGATAGGTAATATGTCTAATGTAACTTCCTTACTGAATCAGTCTTTTCCGAATGGAATTCCGAATTCTGGACTAGCTGGCCATGGGAGTAGCCAGCGCGGTGGAGGTGTTGATGCTGGGGCGGAATCAGATCCGCTGTCTGGTGTTGGCAGTGGAATCAATTTTGGTAATACTTTGCAATCGAATTTGGGTAACCCGGGTTCATCCGGTCAGGGTCAGGGTCAACAATTTTCAAATGCTTCTGGTAACCAGATGATGTCAGATCAACAGCATTCCCAGCAACTCGAACTTCAGAGTTTTCAGCATAGTCAACAATCAATGCAACAGTTCTCTGCTCCTCTGAACGCTCAGCAGCAACAGCATTTTCAGTCAATTCGTGGTGGAATGGGTGGTGTTGGCTCGGTTAAGTTGGAGCCACAGGTAAACAACGATCAGTTTGGGCAGCAGCAGCAGCAATTGCCCTCAAGGAATCTTGCTCAGGTGAAGTTGGAACCACAGCAGCTTCAAACAATGAGAAACATGGCAGCAGTAAAAATGGAGCCTCAACATACTGATCAGCAGTTTTTGCATCAGCAGCAACAACAACAGCAGCAACAGCAGCAGCAACAACAACTTCTCCACATGTCAAGGCAATCCTCTCAGGCTGCTGCTGCTCAGATGAATCATCTTTTGCAACAGCAGAGACTTTTGCAATATCAACAACATCAGCAGCAGCAACAGCAACAACAGCAACTCTTGAAGGCAATGCCTCAACAACGACCCCATCTACCGCAGCAGTTTCAACAGCAGAATTTGCGGTCTCCTGTGAAGCCACCTTATGAACCTGGAATGTGTGCTAGGCGGCTGACCCATTACATGTATCAGCAACAGCATAGACCTGAAGATAATAACATTGAATTCTGGAGGAAGTTTGTTGCTGAGTATTTTGCTCCGAATGCCAAAAAGAAGTGGTGTGTTTCCATGTATGGAAGTGGCAGACAAACTACTGGAGTTTTCCCTCAGGATGTATGGCACTGTGAAATATGTAATCGCAAACCTGGCCGTGGATTTGAAGCAACTGCCGAGGTTCTTCCCAGGCTTTTCAAAATAAAGTATGAAAGTGGTACTCTGGAAGAGCTCCTTTATGTTGACATGCCTCGAGAATACCATAATTCCTCTGGACAGATTGTCTTAGATTATGCAAAGGCAATACAAGAAAGTGTTTTTGAGCAACTTCGTGTTGTTCGTGATGGTCAGCTTCGAATAGTTTTTTCTCCAGACCTGAAGATATGCTCTTGGGAATTTTGTGCTCGGCGACATGAAGAGCTCATTCCTAGACGACTGTTAATACCTCAGATTAGTCAGCTTGGAGCAGTTGCTCAAAAATACCAGGCAATTACTCAAAATGCGACACCCAATTTATCGGTTCCAGAGTTACAAAGTAATTGCAATATGTTTGTTGCATCAGCCCGTCAGTTGGCAAAAGCTTTGGAAGTTCCATTGGTCAATGATTTAGGATATACTAAGAGATATGTGCGGTGCCTTCAGATATCAGAAGTGGTAAATAGTATGAAAGACTTGATAGATTATAGCAGAGAAACGCGAACTGGACCCATGGACAGCTTAGCAAAATTCCCTCGGAGAACAAGTGGTTCATCTGGACTTCATAGTCAGGCACAACAGTCTGAAGATCATATGCAGCAGCAGTCACAGCCTCAGCAGCCACTCCCGCATATGGTTCCCCATACTTCAAATGCATCTGCATCAACCACCACAAGCACCATTGTTGGACTTCTCCACCAGAATTCTGTGAATTCTAGACAAAATTCAATGAACAATGCAAGCAGCCCTTATGGGGGTAGTTCTGTTCAAATTCCATCCCCAGGTTCGTCTGGTAATGTTCCACAAGCGCAGCCAAATGCATCCCCTTTTCAATCACCCACACCATCCTCATCTAACAATCCACAAACATCTCATCAAGCATTAACTTCTGCAAACCACATGGGTACGGCAAATTCACCAGCCAATATTCCCTTGCAACAACAACAGACTTCTCTCCCTGCTGAAGCTGACACAACGGATGCCCAGAGCTCAGTCCAGAAAATCATTCATGAGATGATGATGTCCTCCCAGATGAACGGCCCAGGTGGAATGGCCGGTGCTGGTTCTCTTGGAAACGACATGAAAAATGTAAATGGGATTCTACCAGGGAGTAACAATAACGGTGGGCTTGTGGGTAATGGGGCTGTGAACAGTAATTCAGGTGTTGGGGTTGGTGGTTATGGCACAATGGGTCTTGGTCCATCTGGTATGAGCAATGGAATGAGACCTGTAATGGGACATAATTCCATGATGAATGGAAGGGGAGGACTGGCATCTCTTGCACGGGAGCAAGTTATGAATCAGCAGGACTTATCAACCCAACTACTTAGTGGGCTAGGAGCAGTAAATGGCTTTAATAATCTTCAATTTGATTGGAAACCATCTCCATGA 2631 0.4584 MVPPGPPTPLGAQSVPSLLRSNSGMLGGQGGPVPSQTSFPSLVAQRNQFNNMNMIGNMSNVTSLLNQSFPNGIPNSGLAGHGSSQRGGGVDAGAESDPLSGVGSGINFGNTLQSNLGNPGSSGQGQGQQFSNASGNQMMSDQQHSQQLELQSFQHSQQSMQQFSAPLNAQQQQHFQSIRGGMGGVGSVKLEPQVNNDQFGQQQQQLPSRNLAQVKLEPQQLQTMRNMAAVKMEPQHTDQQFLHQQQQQQQQQQQQQQLLHMSRQSSQAAAAQMNHLLQQQRLLQYQQHQQQQQQQQQLLKAMPQQRPHLPQQFQQQNLRSPVKPPYEPGMCARRLTHYMYQQQHRPEDNNIEFWRKFVAEYFAPNAKKKWCVSMYGSGRQTTGVFPQDVWHCEICNRKPGRGFEATAEVLPRLFKIKYESGTLEELLYVDMPREYHNSSGQIVLDYAKAIQESVFEQLRVVRDGQLRIVFSPDLKICSWEFCARRHEELIPRRLLIPQISQLGAVAQKYQAITQNATPNLSVPELQSNCNMFVASARQLAKALEVPLVNDLGYTKRYVRCLQISEVVNSMKDLIDYSRETRTGPMDSLAKFPRRTSGSSGLHSQAQQSEDHMQQQSQPQQPLPHMVPHTSNASASTTTSTIVGLLHQNSVNSRQNSMNNASSPYGGSSVQIPSPGSSGNVPQAQPNASPFQSPTPSSSNNPQTSHQALTSANHMGTANSPANIPLQQQQTSLPAEADTTDAQSSVQKIIHEMMMSSQMNGPGGMAGAGSLGNDMKNVNGILPGSNNNGGLVGNGAVNSNSGVGVGGYGTMGLGPSGMSNGMRPVMGHNSMMNGRGGLASLAREQVMNQQDLSTQLLSGLGAVNGFNNLQFDWKPSP 876
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun8g00973 876 MobiDBLite consensus disorder prediction 1 39 - -
Viun8g00973 876 Pfam LIM-domain binding protein 334 588 IPR029005 -
Viun8g00973 876 MobiDBLite consensus disorder prediction 652 706 - -
Viun8g00973 876 MobiDBLite consensus disorder prediction 592 636 - -
Viun8g00973 876 MobiDBLite consensus disorder prediction 294 321 - -
Viun8g00973 876 MobiDBLite consensus disorder prediction 103 162 - -
Viun8g00973 876 MobiDBLite consensus disorder prediction 294 326 - -
Viun8g00973 876 MobiDBLite consensus disorder prediction 237 266 - -
Viun8g00973 876 PANTHER LIM DOMAIN-BINDING PROTEIN 35 865 IPR029005 -
Viun8g00973 876 MobiDBLite consensus disorder prediction 232 266 - -
Viun8g00973 876 MobiDBLite consensus disorder prediction 14 39 - -
Viun8g00973 876 MobiDBLite consensus disorder prediction 75 162 - -
Viun8g00973 876 MobiDBLite consensus disorder prediction 582 636 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun8g00973 Viun-Chr8 10651796 10662330 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun8g00973 1 872 C2H2 Transcription Factor Family AT1G43850 57.631 0.0 730
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun8g00973 - - gmx:100787437 1315.83