Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun8g00969 ATGGAAGGGAATGCGAGAAGCCAGAAAATCGTGGACGTAGGATCGGTTGTGGAAGCCGTTTCAGCTGAGGATGGTGACGCTCCACTCTACAGCCTCGATAGTCTTTGTATGCGGTGTGGTGAAAACGGGATTACAAGATTTTTATTGACTTTAATTCCTCAGTTCAAAAAGAGTTTGCTATCAGCTTTTGGATGTCCACACTGTGGTGAGAGGAACAATGAAGTACAGTTTGCTGGTGAAATACGCGGTTGTCGTTACATTTTGGCAATCACATCAGGCGAGCAGAAGATGCTAAATCGTCAAGTGGTTAAATCAGAATCTGCTACCATTAAGGTGGAAGGGATACTTATGAGAGCAGCTGATGAACTTCAGGCCCTTCAAGAGGAACGCAAACTCCAGAGACCGCTGAAGCAATTGATCAATATTCCTTACTTTCAAGAAGTAATTGTTATGGCATCCACATGTGATGCCTGTGGCTACCGCAACTCTGAGTTGAAACCTGGTGGACGAATTCCTGAAAAGGGGAAGAAAATTACTCTTTCTGTGAAGAATGTCAATGACCTTAGCCGTGATGTAATAAAGTCTGATACTGCAAGTGTAAAAGTTCCGGAACTTGACTTGGAGCTGGCAAGCGGAACCCTTGGAGGAATAGTTACAACTGTTGAAGGTTTAATCACAAGAATTGGTGAAAGCCTTGAGAGGGTCCATGGCTTTACTTTTGGAGATAGTTTTGATGAAAATAGTAGAAGCAAGTGGATAGACTTTAAAACAAGACTAAACAAGTTTCTTAGCTTGGAAGAAGCTTGGACTCTAATTCTTGATGATGCATTAGTCAATTCTTTTATAGCACCTGCAACTGATGATATGAAAGAGGACAAACAATTAGCATTTGAGGAATACGAGAGGTCATGGGAACAAAATGAAGAATTAGGTCTGAATGATATGGACACCTCTTCTGCCGAAGTTGGTTCTAAAACTGAGTGA 984 0.4177 MEGNARSQKIVDVGSVVEAVSAEDGDAPLYSLDSLCMRCGENGITRFLLTLIPQFKKSLLSAFGCPHCGERNNEVQFAGEIXRGCRYILAITSGEQKMLNRQVVKSESATIKVEGILMRAADELQALQEERKLQRPLKQLINIPYFQEVIVMASTCDACGYRNSELKPGGRIPEKGKKITLSVKNVNDLSRDVIKSDTASVKVPELDLELASGTLGGIVTTVEGLITRIGESLERVHGFTFGDSFDENSRSKWIDFKTRLNKFLSLEEAWTLILDDALVNSFIAPATDDMKEDKQLAFEEYERSWEQNEELGLNDMDTSSAEVGSKTE 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun8g00969 328 MobiDBLite consensus disorder prediction 309 328 - -
Viun8g00969 328 Gene3D ZPR1, A/B domain 171 313 IPR042451 -
Viun8g00969 328 Gene3D ZPR1, zinc finger domain 132 170 IPR042452 -
Viun8g00969 328 Gene3D ZPR1, zinc finger domain 26 79 IPR042452 -
Viun8g00969 328 SMART zpr1 143 285 IPR004457 GO:0008270
Viun8g00969 328 SMART zpr1 34 142 IPR004457 GO:0008270
Viun8g00969 328 NCBIfam ZPR1 zinc finger domain 138 317 IPR004457 GO:0008270
Viun8g00969 328 FunFam Zinc finger protein ZPR1 24 79 - -
Viun8g00969 328 PANTHER ZINC FINGER PROTEIN ZPR1 140 324 IPR040141 -
Viun8g00969 328 MobiDBLite consensus disorder prediction 311 328 - -
Viun8g00969 328 Pfam ZPR1 zinc-finger domain 140 283 IPR004457 GO:0008270
Viun8g00969 328 Pfam ZPR1 zinc-finger domain 34 115 IPR004457 GO:0008270
Viun8g00969 328 FunFam Zinc finger protein ZPR1 171 313 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun8g00969 Viun-Chr8 10580041 10590303 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun8g00969 140 324 C2H2 Transcription Factor Family AT5G22480 76.216 6.46e-100 301
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun8g00969 K06874 - pvu:PHAVU_002G0993000 343.199