Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun8g00959 ATGATGATGAAGAAGAAGAAATCAGATGCAGAAAGGCAGTATGACGACTACAATGAATTTAAGAGCAATGAAGATAAATATGATAGTCAATATAAGAAAGAGAAGGAGAGGAAGAAGAAAAAACTGAGTGAAGAAGGGAAAAGTAAGGAGTATAATGAATTTGAAAGAAATGAAGGTGAAGATGATACCCAAAGTAAGAAGAGGAAGAAAAAATTGAGTACAGAAAGCAAAAGTAAGGAGTATGAAGTCTTTGAAAAGAATGAAGCTGAAGGTGATGCCAGTAAGGAGAGGAAGAAGAAAAAACTGAGTGAAGAAGACAAATGTAAGGAGTATAATGAATTTGAAAACAATGAAGGTGAAGATGGTGCCCAGGGTAGGAAGAGAAAGAAGAAAAAATTGAGTAAAGAAAGCAAAAGTAAGGAGTATAATGTCTTTGAAAGGAATGAAGGTGAAGATGGTGTCAAAGATAAGAAGAAGAAGAACAACATGAGTGAAGAAGCCAAAAGTAAGGAGTATAATGAACTTGAAAGCAATGAAGTTGAAGACGATGCCCAAGGTAAGAAGAAAAAATTGAGTAAAGAAAGCAAAAGTGAGGAGTATAATGTCTTTGAAAGGAATGAAGGTGAAAATGATGCCAAAGATAAGAAGAAGAAGAGAAAAAAACATGGTGAAGAAGGTAAAAGTAAGGAGTATAATGAGTTTGAAAACAACGAAGGTGAAGATGATGCCCAAGGTAAGAAGAGGAAGAAGAGAAAATTGAGTAAAGAAAACAGAAGTAAGGAGTATAATGTATTTCAAAGGAATGGATATGAAGACAATGTTGAAGGTAGGAAGAGTAAGAAGGAAAAAATGATTGAAGACAGCAAAAGCAAGGACAAAAATATGATGACAAAGAAAGCCAAGGCAGATAATGGCGACTCTCCTAATCCTGCACACAGCGGATTATCGAAACCCAAACGGGTAACTTTCTCTGATGAAGTGGAGGTTTGTTGTGATGGCTTAGTCCGTGGGAAACGGTTCACACAAGAAGAAGACGAGCAGATTAAATTGGCTGTTTATAATTTTATAGAGTCTCGTGGTTTGGGAGATGAAGGTCTAGATATGGTTCTCCATTGCAGGGATCATCGGGAAGTTAGATGTTGTTGGAAGGAAATTGCAGCAGCCTTACCCCACAGGCCAATGTATAGTGTGTATACTCGTGCCCATATTTTGTTTGAAAGGAGTGAGAAGCGAGAGTGGACACCTGAAGAGTATGAATTTTTACGGAAGGTGAAGGAACAACATGGATCTAATTGGAAACAAGTAGCTGACGCATTGGGTAAAAATCGAATGCATGTAAAGGATGCGTGGCGTAGAGTGAAATTAAGAAATACAAATAAAGGACGCTGGACCCAAGAGGAGTATCAAAAGTTATTTGATTTAGTGAACCTGGACCTACGCGTGAGGGCTTCACAGGGTTATAGAAAATCAAAGCATGGTATGTTGCGAGATAATATTGGTTGGGAGGCAATTGGTGAAAAGTTGGTCACTAGAAACTCCGTGAGCTGCTGCCACAAGTGGTATGATAAATTAAGATCACCCATGGTTGCTACTGGTGCATGGAGCGATACTGATGACTATCGCTTGGTCGATGCTTTGTATAATTTGGACGCGTGCTGCATGGAGGAGGTGAATTGGGACGATCTGCTTGAGCATAGGACTGGTGAGGCATGTAGAAAACGGTGGAACCAAATTGTCCGATATATTGGAGAGCATGGAGGGAAGTCATTTGCTGAGCAGGTTGAAATTCTTGCAAAAAGATATTGCCCCAACTTACTGGAAGAAAGAGAGACCTTTGATGCAAAACCGTTGGTATGTTGA 1860 0.3909 MMMKKKKSDAERQYDDYNEFKSNEDKYDSQYKKEKERKKKKLSEEGKSKEYNEFERNEGEDDTQSKKRKKKLSTESKSKEYEVFEKNEAEGDASKERKKKKLSEEDKCKEYNEFENNEGEDGAQGRKRKKKKLSKESKSKEYNVFERNEGEDGVKDKKKKNNMSEEAKSKEYNELESNEVEDDAQGKKKKLSKESKSEEYNVFERNEGENDAKDKKKKRKKHGEEGKSKEYNEFENNEGEDDAQGKKRKKRKLSKENRSKEYNVFQRNGYEDNVEGRKSKKEKMIEDSKSKDKNMMTKKAKADNGDSPNPAHSGLSKPKRVTFSDEVEVCCDGLVRGKRFTQEEDEQIKLAVYNFIESRGLGDEGLDMVLHCRDHREVRCCWKEIAAALPHRPMYSVYTRAHILFERSEKREWTPEEYEFLRKVKEQHGSNWKQVADALGKNRMHVKDAWRRVKLRNTNKGRWTQEEYQKLFDLVNLDLRVRASQGYRKSKHGMLRDNIGWEAIGEKLVTRNSVSCCHKWYDKLRSPMVATGAWSDTDDYRLVDALYNLDACCMEEVNWDDLLEHRTGEACRKRWNQIVRYIGEHGGKSFAEQVEILAKRYCPNLLEERETFDAKPLVC 619
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun8g00959 619 MobiDBLite consensus disorder prediction 271 300 - -
Viun8g00959 619 MobiDBLite consensus disorder prediction 224 247 - -
Viun8g00959 619 ProSiteProfiles Myb-like domain profile. 455 524 IPR001005 -
Viun8g00959 619 SUPERFAMILY Homeodomain-like 504 583 IPR009057 -
Viun8g00959 619 MobiDBLite consensus disorder prediction 136 214 - -
Viun8g00959 619 Pfam Myb-like DNA-binding domain 413 471 - -
Viun8g00959 619 SUPERFAMILY Homeodomain-like 410 471 IPR009057 -
Viun8g00959 619 ProSiteProfiles Myb-like domain profile. 405 454 IPR001005 -
Viun8g00959 619 MobiDBLite consensus disorder prediction 1 319 - -
Viun8g00959 619 MobiDBLite consensus disorder prediction 1 127 - -
Viun8g00959 619 Gene3D - 414 452 - -
Viun8g00959 619 ProSiteProfiles Myb-like domain profile. 526 579 IPR001005 -
Viun8g00959 619 Coils Coil 236 256 - -
Viun8g00959 619 PANTHER GB|AAC33480.1 5 618 - -
Viun8g00959 619 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 410 458 IPR017930 -
Viun8g00959 619 SMART sant 459 526 IPR001005 -
Viun8g00959 619 SMART sant 530 581 IPR001005 -
Viun8g00959 619 SMART sant 336 407 IPR001005 -
Viun8g00959 619 SMART sant 409 456 IPR001005 -
Viun8g00959 619 Gene3D - 453 528 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun8g00959 Viun-Chr8 10214726 10217662 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun8g00959 407 580 MYB Transcription Factor Family AT4G32730 28.571 5.90e-09 57.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Viun8g00959 Myb_DNA-bind_6 1.1e-12 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun8g00959 - - var:108338141 909.442