Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun8g00910 ATGGCTGTGGAACTCATGGGGTTCCCCAAAATCGATGATCAAAAGGCCATCCAAGAGGCTGCATCGGAAGGCCTCAAGGGCATGGAACACCTGATCCGAATCCTCTCCCACCAACCCTCTCACTTGAACACCGACCTCACCGACGTTACCGTCTCCAAGTTCAAGAAACTCATCTCGCTCCTCAACCGAACCGGCCACGCTCGCTTCAGACGTGCTCCGGTTCAGCCTCAGGTTCAGCCCCCTGAACCAGTTCAAACCCCCGAGCCCATTCAAACCCTCGCACCGGCTCACAATCCTCCCTCTGCGCCGCTCCATCTTCCTCCCCCGCAAACGGCCAACCTCTCCCTGCCGGCGCTCTTCGCGTCGCCGGCGCCGGTTCACCATGCCTCCGGGAGCGTCACGCTCGACTTCACCAAGCCGCACAACGCGCTCCGCAACTCCAAGGCCAAGTCCGTGGAACTCGAGTTCTCCAAGGAGACCTTCAGCGTCTCCTCCAACTCCTCCTTCATGTCCTCCGCCATCACCGGCGACGGCAGCGTCTCCAACGGCAAGATCTTTCTCGCCCCGCCGCCGCCTCCTCCCGCGACTGCCGCCGGGAAACCGCCGACCTTCAAGAAACGCTGCCTTGAACACCGCGAGCACTCCGACGACGTCTCCGGATCCGGCAAGTGCCACTGCGTGAAGCGAAGGAAAAATAGGGTGAAGAAGACTGTGAGAGTGCCGGCGATAAGTTCAAAGATCGCCGATATTCCACCGGACGAGTACTCGTGGAGGAAGTACGGTCAGAAACCGATCAAGGGCTCACCGTACCCTAGGGGGTATTACAAGTGCAGCACGGTGAGAGGGTGTCCCGCGAGGAAACACGTGGAGCGCGCACCAGACGATCCGGCGATGCTGATTGTGACGTACGAGGGGGAGCACAGGCACGCGGTTCAGGCCGCGATGCAGGAGAACGCAGCCGGAGTGGTGGGTTTGGTGTTCGAGTCAACGTAG 993 0.6073 MAVELMGFPKIDDQKAIQEAASEGLKGMEHLIRILSHQPSHLNTDLTDVTVSKFKKLISLLNRTGHARFRRAPVQPQVQPPEPVQTPEPIQTLAPAHNPPSAPLHLPPPQTANLSLPALFASPAPVHHASGSVTLDFTKPHNALRNSKAKSVELEFSKETFSVSSNSSFMSSAITGDGSVSNGKIFLAPPPPPPATAAGKPPTFKKRCLEHREHSDDVSGSGKCHCVKRRKNRVKKTVRVPAISSKIADIPPDEYSWRKYGQKPIKGSPYPRGYYKCSTVRGCPARKHVERAPDDPAMLIVTYEGEHRHAVQAAMQENAAGVVGLVFEST 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun8g00910 330 SMART WRKY_cls 251 311 IPR003657 GO:0003700|GO:0006355|GO:0043565
Viun8g00910 330 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 15 316 IPR044810 GO:0003700
Viun8g00910 330 Gene3D WRKY domain 238 312 IPR036576 GO:0003700|GO:0006355|GO:0043565
Viun8g00910 330 FunFam WRKY transcription factor 65 235 312 - -
Viun8g00910 330 SUPERFAMILY WRKY DNA-binding domain 249 311 IPR036576 GO:0003700|GO:0006355|GO:0043565
Viun8g00910 330 MobiDBLite consensus disorder prediction 70 102 - -
Viun8g00910 330 ProSiteProfiles WRKY domain profile. 246 312 IPR003657 GO:0003700|GO:0006355|GO:0043565
Viun8g00910 330 MobiDBLite consensus disorder prediction 76 102 - -
Viun8g00910 330 Pfam WRKY DNA -binding domain 253 309 IPR003657 GO:0003700|GO:0006355|GO:0043565
Viun8g00910 330 Pfam Plant zinc cluster domain 205 249 IPR018872 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun8g00910 Viun-Chr8 9262764 9265274 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun8g00910 1 329 WRKY Transcription Factor Family AT2G24570 59.885 1.09e-116 338
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Viun8g00910 WRKY 8.9e-26 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun8g00910 - - pvu:PHAVU_001G060200g 546.969
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun8g00910 8 9262764 9265274 Viun8g00910 8 9262764 9265274 ECH