Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun8g00837 ATGGATAGAGAGAATGCTGTAATCGGTGTGAGAGACAGTGTTCGAGTGACGCGAGCAATGGCTAGAGCTTTGAGAGAGGTCTCTGCCTCTTCAAGACCATGCTTTAAGAAACAGCGGAAATTGGAGAAGAGCAGCAGAGCAGCGCTGGCAGATGTAACCAATGAATACAGAAAACCGCAGCTCAATAAGTGCGCTGTCTCCCGCTTTAAGACAAGAGGAGGTTATAAGAATAAGAAGCGAAACACAAAGGGAGCTTCCAATGTCTCCATGCAAGTTTTGTCAACTCAAGATGTTAGAGCAAAGTCAGCAAAAGATTTATCCACAATGTCGATGGTACAGTCTCATGAACCTGTTGTTGCTGAAAGGCTGGAAGACAGAGAGCTAGTGCCACCTTCTATGTCTGTCATGGCAGGTCCCCAGCTTTCAATGCAGGACTCTATGCTGTCCCATGAACTCCTTAGCTCTCCGAACAAAGATATTGATATGATTTCGGAGAAACTTAAGCATTCGGATGGTTTGGGAATTGTGGACATTGATTCAGTGAAATTAAAGGATCCTCAAGTTTGGAGTTCATATGCCCCTGATATATACAATAATATACGTGTCAGAGAGTTTGAAAGGAGACTAATCGATTACATGGGCGAGCTACAGAAAGACGTCACTCCAAGCATGCGCGCAATTCTGATTGATTGGCTTGTGGAGGTTTCTGAGGAATATAAGCTAGTTCCAGATACTCTTTACCTTACTGTGAATCTCATTGATCGGTTTCTTTCTCAAAGTTTGATTCAGAAACAAGGACTACAGTTGCTGGGTGTTACTTGCATGCTGATTGCATCAAAGTATGAAGAGATTTGTGCTCCTCGAGTGGAAGAATTTTGCTTCATCACAGATAATACGTACTCAAAAGCGGAGGTATTGAAAATGGAGAGTGAGGTTCTAAATCTGTTGCATTTTCAATTATCTGTTCCCACGGCTAAAACATTTCTCAGGAGGTTCATCCTAGCAGCACAATATTCTTGTAAGGTTTCTTATGTTGAAGTGGAATTTCTGGCAAATTATTTAGCAGAACTCACTCTTGTTGAATACAGCTTCTCGCAGTTTCGACCATCCATGATAGCTGCGTCTGCTGTTTTACTAGCCAGATGGACCCTCAACCAGTCAGAACATCCATGGAATTCAACCATGGAACACTATACGAATTACAAAGTGTCAGAACTTAAAACTATTGTCCTGGCACTGGCAGATTTGCAACTTAATACCAAAGGCTGTCCTCTGAATGCTATACGTGAAAAATATAAACAGCAGAAGTTCATGAGTGTGGCAAATTTGTCTCCAAAACCAGTGCAGTCACTTTTTGAGGCTGAAGTATAA 1371 0.4201 MDRENAVIGVRDSVRVTRAMARALREVSASSRPCFKKQRKLEKSSRAALADVTNEYRKPQLNKCAVSRFKTRGGYKNKKRNTKGASNVSMQVLSTQDVRAKSAKDLSTMSMVQSHEPVVAERLEDRELVPPSMSVMAGPQLSMQDSMLSHELLSSPNKDIDMISEKLKHSDGLGIVDIDSVKLKDPQVWSSYAPDIYNNIRVREFERRLIDYMGELQKDVTPSMRAILIDWLVEVSEEYKLVPDTLYLTVNLIDRFLSQSLIQKQGLQLLGVTCMLIASKYEEICAPRVEEFCFITDNTYSKAEVLKMESEVLNLLHFQLSVPTAKTFLRRFILAAQYSCKVSYVEVEFLANYLAELTLVEYSFSQFRPSMIAASAVLLARWTLNQSEHPWNSTMEHYTNYKVSELKTIVLALADLQLNTKGCPLNAIREKYKQQKFMSVANLSPKPVQSLFEAEV 456
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun8g00837 456 FunFam Cyclin A1 310 442 - -
Viun8g00837 456 SUPERFAMILY Cyclin-like 322 445 IPR036915 -
Viun8g00837 456 PANTHER CYCLINS 151 434 IPR039361 -
Viun8g00837 456 PIRSF Cyclin_A_B_D_E 9 455 IPR046965 GO:0016538|GO:0044772
Viun8g00837 456 SMART Cyclin_C_2 323 446 IPR004367 -
Viun8g00837 456 FunFam Mitotic cyclin 6 209 308 - -
Viun8g00837 456 Gene3D - 209 321 - -
Viun8g00837 456 Pfam Cyclin, N-terminal domain 195 321 IPR006671 -
Viun8g00837 456 SUPERFAMILY Cyclin-like 184 320 IPR036915 -
Viun8g00837 456 ProSitePatterns Cyclins signature. 225 256 IPR006671 -
Viun8g00837 456 SMART cyclin_7 327 415 IPR013763 -
Viun8g00837 456 SMART cyclin_7 230 314 IPR013763 -
Viun8g00837 456 Pfam Cyclin, C-terminal domain 323 445 IPR004367 -
Viun8g00837 456 CDD CYCLIN_AtCycA-like_rpt2 323 437 - -
Viun8g00837 456 Gene3D - 195 442 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun8g00837 Viun-Chr8 7613428 7620007 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun8g00837 10 452 Core Cell Cycle Gene Families AT5G25380 50.877 3.68e-138 402
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun8g00837 K06627 - gmx:100777132 679.478
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun8g00837 8 7613428 7620007 Viun9g03005 9 37896747 37902156 PCT