Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun8g00828 ATGGAGGGTAGTGAGACACAGAGAGTGAGAGGGTTTGACATGTGGAGGAGCCATTGCATTGGGGTTTTGTCAACTTCTGAACGAGAAGAAGATGAGGAAACTCTCAAGTGTGTGGCAATAGAGAGACTTCTTGCAAGGGCATGCACCAAGAGAAGTGTGGTCAACCAAGTGGAAGGGAAAGCAGAAGAGGTTGACACCAAGCAATTGGAGTTATCAGAGAGAAAGAGCCTTCTAGATAGACTTGTGAAGATAGCAGAAGAAGATAATGAGAGGTTCTTGTTGAAGCTCAGGGAAAGGATGGACAGAGTTGGGCTTGAAATTCCAACAATTGAAGTTCGATTTGAGCATATAAACGTTGAAGCACAAGTTTATGTTGGGAGCAGAGCATTGCCTACAGTACTCAACTTCTTTGTGAATGTGCTTGAGGGGTTCTTAAATTCTCTTCACATAATTAAAAGTCCAAAGAAACCATTACACATCCTTCAGAATGTTAGTGGAATCATAAAACCTAAAAGAATGGCATTGCTTTTAGGGCCACCAGGATCTGGAAAAACCACATTGCTGTTGGCATTGGCTGGAAGACTTGGTAAAGATTTGAAACATTCTGGGAGAGTAACATACAATGGACATGGGCTTGAGGAATTTGTGCCACAAAGGACATCAGCTTACATAAGTCAACATGATAATCACATTGGAGAAATGACTGTGAGAGAAACACTGGCTTTCTCAGCAAGATGTCAAGGGATTGGACAGAACTATGAGGTGTTGACTGACCTGCTTAGAAGAGAGAAGGAAGCAAACATTGAACCAGATCCTGATGTTGATGCATACATGAAGGCAGCAGCACAAGAAGGGCAGCAGAACAGTGTGGTTATTGACTACATTCTTAAGATTTTGGGACTTGAAGTGTGTGCTGACATTATGGTAGGAGATGAAATGATAAGAGGTATCTCAGGAGGGCAGAAAAAGAGACTCACAACAGGGGAGATGATGGTTGGACCTATAAGGGTGTTGTTCATGGATGAGATATCAACTGGTTTGGACAGTTCCACAACTTTTCAGATTGTCAACTCTATCCGGCAATCCATCCATATTCTGAATGGAACTGCACTTGTGAGCTTATTACAGCCAGCACCAGAAACTTATGAACTATTTGATGATATAATACTATTAACAGATGGGCAAATTGTGTACCAAGGACCAAGAGAAAATGTACTAGAGTTTTTTGAATCAATGGGTTTCAAGTGTCCTGAAAGAAAAGGAGTTGCTGACTTCTTACAAGAAGTAACATCAAGAAAAGATCAATGGCAATATTGGGCACATAAAGATGAACCATATAGCTTTGTCACTGTCAAGGATTTTTCTGAAGCCTTCCAGTCATTTCACATAGGTAAACAACTTGGAGATGAAATGGAAAATCCTTTTGACAAGTCTAAGTGCCATCCAAATGCATTGACCACAAAGAAGTATGGTGTTAACAAGAAAGAGCTGTTGAGGGCTTGTGCTAGCAGAGAATTTTTGCTTATGAAGCGAAATTCCTTTGTCTACATATTCAAAGCCACACAACTTACCTATTTAGCTATCTTGACAACGACATTATTTCTCCGAACCAAGATGAGTCACTATACCAAGGCAGATGCAGAAACTTACATGGGTGCTCTGTTCTTCACAGTCACTGTTGCAATGTTCAATGGAATATCAGAACTGAATATGACCATCATGAAACTTCCTGTCTTTTACAAGCAAAGAGACCACCTTCTCTATCCTTCATGGGCTTATTCTCTTCCACCATGGATCCTCAAAATACCATTAACCCTTGTAGAGGTTTCCATCTGGGAATGTATCTCTTATTATGCCATTGGCTATGATCCAAATATTGTCAGGCTTCTAAAACAGTACTTGGTAGTGTTTTGCATTAACCAGATGGCATCAGCACTGTTTCGGTTGATGGCTGCACTAGGAAGGGATATTGTGGTGGCAAACACTGCTGGCACATTTGCACTGCTTGCAGTTACAGTTTTGGGAGGATTTGTGATTTCCAGAGAGGATGTGCACAAATGGTTTCTGTGGGGTTACTGGTCCTCACCATTGATGTATGGACAAAATGCTATAGCTGTGAATGAGTTTCTTGGGAATAGTTGGAGAAAGGTTAGTCCTAATTCCAGTGAAACATTGGGAGTACTGATACTGAAATCTCGTGGATTTTTCCCACAAGCGTATTGGTATTGGATTGGAATAGGAGCTTTGATTGGTTATGTTTTTCTCTTCAACTTTCTCTTCACCCTGGCTTTGCAATATCTCAGTCCATTCAGAAAGGATCAAGCAGGGCTATCACAAGAGAAGTTGCTTGAGAGAAATGCTTCAATGGCTGAAGAGTTCATTCAGTCTCCAACAAGAAAAAATTCTTCTGATACAAAGATGGACAAAGAAGCAAGTCCATCATCCAAGTCCTTTTCTGAAGAAGTTGGTAAAAAGAACAAAGCTAGTGACAGTGAAAGGAGAGGCATGGTTCTTCCTTTTCAACCTCTATTCCTCGCTTTTGACGAGATAAGATATTCTGTAGACATGCCACAGGAAATGAAAAGTGAAGGAATCAGTGAGAATCGTCTTGAACTTCTGAAAGGTATTAATGGTGCTTTTAGGCCAGGGGTGCTAACAGCTCTGATGGGTGTAAGTGGTGCTGGCAAGACTACTCTACTGGATGTTCTATCTGGAAGGAAAACAAGTGGCTACATTGAAGGAAGCATCACAATATCTGGATACCCAAAGAAGCAAGAAACATTTGCTCGCATATCAGGATATTGTGAACAGCTTGATATCCACTCACCCAATGTTACAGTTTTTGAGTCCTTGCTATACTCAGCATGGCTTCGTTTATCTCCAGAAGTTGATAAAGAAACTAGAAAGATGTTCATTGAGGAAGTTATGGAACTTGTAGAGCTTAATTCATTAAGAGAAGCACTTGTTGGATTGCCAGGGCAGACAGGATTGTCAACTGAACAGCGCAAGAGGCTTACAATTGCAGTTGAACTTGTGGCCAACCCATCAATAATTTTCATGGATGAGCCAACCTCTGGCCTTGATGCTAGAGCAGCTGCAATTGTGATGAGAACTGTGAGGAACACTGTGGACACAGGTCGAACTGTGGTCTGCACCATCCACCAGCCAAGTATCGATATATTTGACGCCTTTGATGAGTTGTTACTTCTGAAATTGGGAGGGGAGCAGATATATTCTGGTCCAATTGGGAGCAACTCTTCCCATCTGATCCAGTACTTTGAGGCTGTTCCAGGAGTTCCTCAGATCAAAGATGGTTATAATCCAGCAACGTGGATGTTGGAAGTCACATCAGCAGCCAAAGAGGCAAGTCTTAAAATTGACTTCACAGATGTGTACAAAAATTCAGAGCTACACAGGAGAAACAAACAACTGATTCAGGAGCTTAGTGTACCATGTGAAGGTTCAAGAGATCTATACTTTCATAGTCAGCATTCACAGAGTTTCATGGCACAACTCATAGCGTGCCTATGGAAGCAACATTTGTCATATTGGCGGAACACATCATATACTGCAGTTAGACTCCTATTTACCACAACCACAGGCTTATTGTTTGGGGTGATATTTTGGGACGTTGGCTTGAAAAGGAGAAAGGAGCAAGATCTTTTTGATGCAATGGGTTCAATGTATGCTGCTGTTACCTTCATTGGGGTTGTGAATGGTGCCTCGGTGCAGCCTATAGTAGCAATTGAGAGAACAGTCTTCTACCGAGAGAGAGCTGCAGGAATGTATTCAGCTTTACCATATGCTATTTCACAGGTTATTATAGAGCTTCCCCACATTTTGGCTCAGGCTCTGATATATGGTATCATAGTATATGCCATGATGGGATTTGAATGGACAGCACCAAAGGTGTTTTGGAACCTCTACTACACCTACTTCAGTTTCTTATACTACACTTTCTATGGCATGATGACCATGGCCATAACTCCTAACCCACACATTGCTGCCATATTGTCCACCTCATTCTATGCAGTATGGTGCCTTTTCTCAGGCTTCATCATTCCCTTATCGAGAATACCCATATGGTGGAAATGGTACTATTGGATTTGCCCTGTTGCATGGACCTTGTATGGATTGGTGGCTTCTCAATATGGAGATGACATGCACACACTTGAGAATGGCCAAAGGGTTGAAGAATTTGTGAAGAACTATTTTGGGTTTGAACATGATTTTCTTGGAGTGGTTGCAATTGTTGTGGCTGGTTTCTCACTTTTGTTTGCACTCATCTTTGCCTTTGGAATCAAAGTATTCAACTTCCAAAAAAGATGA 4329 0.4146 MEGSETQRVRGFDMWRSHCIGVLSTSEREEDEETLKCVAIERLLARACTKRSVVNQVEGKAEEVDTKQLELSERKSLLDRLVKIAEEDNERFLLKLRERMDRVGLEIPTIEVRFEHINVEAQVYVGSRALPTVLNFFVNVLEGFLNSLHIIKSPKKPLHILQNVSGIIKPKRMALLLGPPGSGKTTLLLALAGRLGKDLKHSGRVTYNGHGLEEFVPQRTSAYISQHDNHIGEMTVRETLAFSARCQGIGQNYEVLTDLLRREKEANIEPDPDVDAYMKAAAQEGQQNSVVIDYILKILGLEVCADIMVGDEMIRGISGGQKKRLTTGEMMVGPIRVLFMDEISTGLDSSTTFQIVNSIRQSIHILNGTALVSLLQPAPETYELFDDIILLTDGQIVYQGPRENVLEFFESMGFKCPERKGVADFLQEVTSRKDQWQYWAHKDEPYSFVTVKDFSEAFQSFHIGKQLGDEMENPFDKSKCHPNALTTKKYGVNKKELLRACASREFLLMKRNSFVYIFKATQLTYLAILTTTLFLRTKMSHYTKADAETYMGALFFTVTVAMFNGISELNMTIMKLPVFYKQRDHLLYPSWAYSLPPWILKIPLTLVEVSIWECISYYAIGYDPNIVRLLKQYLVVFCINQMASALFRLMAALGRDIVVANTAGTFALLAVTVLGGFVISREDVHKWFLWGYWSSPLMYGQNAIAVNEFLGNSWRKVSPNSSETLGVLILKSRGFFPQAYWYWIGIGALIGYVFLFNFLFTLALQYLSPFRKDQAGLSQEKLLERNASMAEEFIQSPTRKNSSDTKMDKEASPSSKSFSEEVGKKNKASDSERRGMVLPFQPLFLAFDEIRYSVDMPQEMKSEGISENRLELLKGINGAFRPGVLTALMGVSGAGKTTLLDVLSGRKTSGYIEGSITISGYPKKQETFARISGYCEQLDIHSPNVTVFESLLYSAWLRLSPEVDKETRKMFIEEVMELVELNSLREALVGLPGQTGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFDAFDELLLLKLGGEQIYSGPIGSNSSHLIQYFEAVPGVPQIKDGYNPATWMLEVTSAAKEASLKIDFTDVYKNSELHRRNKQLIQELSVPCEGSRDLYFHSQHSQSFMAQLIACLWKQHLSYWRNTSYTAVRLLFTTTTGLLFGVIFWDVGLKRRKEQDLFDAMGSMYAAVTFIGVVNGASVQPIVAIERTVFYRERAAGMYSALPYAISQVIIELPHILAQALIYGIIVYAMMGFEWTAPKVFWNLYYTYFSFLYYTFYGMMTMAITPNPHIAAILSTSFYAVWCLFSGFIIPLSRIPIWWKWYYWICPVAWTLYGLVASQYGDDMHTLENGQRVEEFVKNYFGFEHDFLGVVAIVVAGFSLLFALIFAFGIKVFNFQKR 1442
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun8g00828 1442 FunFam ABC transporter G family member 40 859 1089 - -
Viun8g00828 1442 Pfam ABC-transporter N-terminal 44 136 IPR029481 -
Viun8g00828 1442 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 157 418 IPR027417 -
Viun8g00828 1442 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 868 1082 IPR027417 -
Viun8g00828 1442 MobiDBLite consensus disorder prediction 794 830 - -
Viun8g00828 1442 FunFam ABC transporter G family member 34 148 452 - -
Viun8g00828 1442 Pfam ABC transporter 873 1025 IPR003439 GO:0005524
Viun8g00828 1442 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 845 1097 IPR003439 GO:0005524
Viun8g00828 1442 CDD ABCG_PDR_domain2 842 1080 IPR034003 -
Viun8g00828 1442 Gene3D - 860 1091 IPR027417 -
Viun8g00828 1442 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 145 418 IPR003439 GO:0005524
Viun8g00828 1442 MobiDBLite consensus disorder prediction 802 830 - -
Viun8g00828 1442 Pfam ABC-2 type transporter 1171 1384 IPR013525 GO:0016020|GO:0140359
Viun8g00828 1442 Pfam ABC-2 type transporter 497 709 IPR013525 GO:0016020|GO:0140359
Viun8g00828 1442 Pfam ABC-2 type transporter 376 427 IPR043926 GO:0140359
Viun8g00828 1442 SMART AAA_5 170 395 IPR003593 GO:0016887
Viun8g00828 1442 SMART AAA_5 882 1074 IPR003593 GO:0016887
Viun8g00828 1442 PANTHER PLEIOTROPIC DRUG RESISTANCE PROTEIN 1-LIKE ISOFORM X1 9 1442 - -
Viun8g00828 1442 Pfam ABC transporter 161 343 IPR003439 GO:0005524
Viun8g00828 1442 Pfam Plant PDR ABC transporter associated 714 775 IPR013581 -
Viun8g00828 1442 Gene3D - 146 453 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun8g00828 Viun-Chr8 7404089 7413496 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun8g00828 883 1057 Calmodulin-binding Proteins AT2G36910 25.543 7.15e-06 48.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun8g00828 K08711 - gmx:100800368 2533.44