Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun8g00818 ATGGTACCTTTTGGAGGAGTCATTAGTGATATCAAAGGAAGGGCTGCTTGCTACAAACATGATTGGACCAGTGCATTATGTTCTGGGATTAAGATACTGGCTCCAACTTTCTACATATTCTTCGCTTCAGCTCTTCCTGTTATTGCTTTTGGAGAGCAACTTAACAGGGATACAGGTGGAAGCTTAAGTACAGTTGAAACACTGGCATCAACTGCTATTTGTGGAATTATCCAGTCAATATTTGGTGGTCAGCCTATGTTGATTTTGGGAGTTGCTGAACCAACTGTTATAATGTACACTATTCTGTATCAGTTCTGCATAAAAAGTCCAGATCTTGGTGTTGAGATGTTTCTGCCTTGGGCTGGATGGGTTTGTGTGTGGACAGCTATCATGCTGATTTTGCTTGCAACTTTCAATGCCTGCACAGTTATCACGAAGTTCACAAGACTCGCAGAGGAGTTATTTGGCATGTTAATCACTGTCCTTTTCTTCCAAGAGGCTATAAGGGGAGTCAAGGGTGAGTTCGAGACACCCATATCTGAACATGCTTCTGCAGAGGATCATCAATTCCAATGGCTGTATATAAACGGACTACTTGCAGTCATTTTCTCTTTTGGAATACTTCTCACTGCCATGGTCAGCAGAAGAGCAAGAACATGGAGATATGGAACAGGGTGGATGAGAGCTATTGTTGCAGATTATGGGATTCCATTGATGGTTTTGCTTTGGACTGGACTATCCTATACTGTACCCAACAAAGTTCCATCTTCTGTTCCTAGAAGGCTGGTTTGTCCACTTCCCTGGGAACCTGCTTCTCTCTATCACTGGACAGTGATAATGGATATGGGAAAGGTACCGGTGCTTTACATCTTTGCAGCAATTATTCCAGCTATTATGGTAGCAGGTTTATACTTCTTTGATCACAGTGTAGCTTCTAAGATGTCTCAACAGAAGGAATATAATCTTCAAAAACCAAGTGCTTATCACTATGATATGTTCCTTCTTGGTATAATGACTCTGATTTGTGGTTTACTTGGCCTTCCTCCATCAAATGGAGTCCTTCCTCAGTCCCCCATGCATACAAAGAGTTTGGCAGTTCTCAGGAGGCAGATGATCCGAAAGAAGGTGGTAAAAAGTGCCCAGGATTGCATTAAGCAACAAGGAACCGGCACTGAATTATATGGAGCGATGGAAGCTGTGTTTGTAGAAATGGATTCTGAACCAAGTACTAAAGACTTGAACGATTTGAAGGAGGCTGTAATGCAATCTTCTGATAGTAATGGAGAAACGCCTGCATTTGATCCTGAGAAACACATTGATGCCTACATACCAGAACGTGTTAATGAACAAAGAATGAGTAACTTCTTGCAGTCTCTCCTGGTTGGCCTATCAATTTTTGCCGTTTCTATCATCAAAATGATACCCACTTCAGTTCTGTGGGGATATTTTGCGTACATGGCTATTGATAGTCTGCCAGGAAATCAATTCTGGGAAAGAATATTGCTTCTCTTCATTGCACCAAGCCGGCGCAGCAAAATTTTGGAAAGTCCTCATGCCTCGTTTGTGGAATCAGTGCCATTCAAGACCATAGCCTTGTTCACAGTCTTGCAGTGTGTGTACTTTTTAGTATGTTATGGAGTGCAATTGATACCTATAGGAGGAATACTTTTCCCATTACCTTTCTTCCTTCTCATACCCATAAGAGAGTACTTGCTTCCCCGCATATTCAAGCCTGCTGATCTTCAAGAACTAGATGCTGCTGAGTATGAGGAAATTCTTGGAGTTCCAAATGAGATCAAAGATCCAAGTGAGGATGACAACAACGCAGAGATATTGGATGAGATAACAACTTACAGAGGAGAATTAAAGCATAGAACTGTAAGCCAAAGGAAAAACAGAAGCTTCAATGAAGACAAGCAATAG 1923 0.4165 MVPFGGVISDIKGRAACYKHDWTSALCSGIKILAPTFYIFFASALPVIAFGEQLNRDTGGSLSTVETLASTAICGIIQSIFGGQPMLILGVAEPTVIMYTILYQFCIKSPDLGVEMFLPWAGWVCVWTAIMLILLATFNACTVITKFTRLAEELFGMLITVLFFQEAIRGVKGEFETPISEHASAEDHQFQWLYINGLLAVIFSFGILLTAMVSRRARTWRYGTGWMRAIVADYGIPLMVLLWTGLSYTVPNKVPSSVPRRLVCPLPWEPASLYHWTVIMDMGKVPVLYIFAAIIPAIMVAGLYFFDHSVASKMSQQKEYNLQKPSAYHYDMFLLGIMTLICGLLGLPPSNGVLPQSPMHTKSLAVLRRQMIRKKVVKSAQDCIKQQGTGTELYGAMEAVFVEMDSEPSTKDLNDLKEAVMQSSDSNGETPAFDPEKHIDAYIPERVNEQRMSNFLQSLLVGLSIFAVSIIKMIPTSVLWGYFAYMAIDSLPGNQFWERILLLFIAPSRRSKILESPHASFVESVPFKTIALFTVLQCVYFLVCYGVQLIPIGGILFPLPFFLLIPIREYLLPRIFKPADLQELDAAEYEEILGVPNEIKDPSEDDNNAEILDEITTYRGELKHRTVSQRKNRSFNEDKQ 640
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun8g00818 640 Gene3D Helical hairpin bin 14 56 - -
Viun8g00818 640 FunFam probable boron transporter 2 14 56 - -
Viun8g00818 640 Pfam HCO3- transporter family 3 177 IPR011531 GO:0006820|GO:0016020
Viun8g00818 640 Pfam HCO3- transporter family 446 536 IPR011531 GO:0006820|GO:0016020
Viun8g00818 640 Pfam HCO3- transporter family 197 370 IPR011531 GO:0006820|GO:0016020
Viun8g00818 640 PANTHER ANION EXCHANGE PROTEIN 2 593 IPR003020 GO:0005452|GO:0006820|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun8g00818 Viun-Chr8 7249873 7255565 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun8g00818 3 640 Antiporters AT5G25430 61.948 0.0 870
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun8g00818 K24194 - gmx:100808880 973.77
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun8g00818 8 7249873 7255565 Viun8g00818 8 7249873 7255565 ECH
Viun9g03036 9 38113281 38118904 Viun8g00818 8 7249873 7255565 ECH
Viun8g00818 8 7249873 7255565 Viun9g03036 9 38113281 38118904 PCT