Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun8g00816 ATGTTTGGATTGTGTGGTCGTGATGATGCAAAACATGAACATGATGTAAACGAGAGAGAAATCGAGGGAAGGGAAGATGGTAGCCAATACAGTCTCACCGGTGTTCTTCTTCCTTCTCTCGGTGCCACTGCCCAGAACAACGGTAGTCGGAGACCAAAGCTTGGTCGTCATGTCATCTCTCCATACGATCATAATTACAGGCTATGGAACAAGTTTCTGCTAATACTGGTCTTCTACACGGCTTGGATATGTCCATTTGAATTTGGTTTCCTTGAAAAATCAAAGGGTGCCCTAGCTATTACCGACAATCTTGTAAACGGGTTTTTTGCAGCTGACATTGTAATCACCTTTTTCGTTGCTTACCTTGATAAGTCTACTTATCTATTAATCGATGACCACAAACTCATTGCTTTGAGATATGCAAAATCATGGTTGATTTTGGATGTCATTGCTTGCATTCCATATGAAGTTGTTCGCAGTGTGTTGCCACCTTCTCTTCAGTCCTACAGCTACTTAAATGTTCTCCGACTATGGCGACTCCATCGAGTTAGTGCTATGTTTGCAAGATTGGAAAAGGATCGAAATTATAGCTACTTTTGGGTGCGTTGTTGCAAGCTTACATGTGTTACTCTATTCTCACTGCATGCTGCAGCATGTTTTTTCTATTTTCTTGCTGCGAGAGAGAATCCAAAAAATACATGGTTTTCAATTATTCCTTCAACCATCGACCAAACTATATGGGGAAAGTATGTAATATCTGTGTATTGGTCCATAGTCACCCTTGCATCAGTTGGCTATGGTGATCTACATCCTGTAAATACAAAAGAAATGATATTTGCCATTTTCTATATGCTCTTCAACCTTGGACTCACCTCGTACTTGATAGGCAACATGACCAACATGGTTGTCCATTGGACCGAAAGAACTAAAAGATATAGAGACACTGTCCAATATGCCTCAAATTTTGCTCGTAGGAATCGATTGCCTCCTCGTTTGCAAGAACAAATATTTGCTCATTTGCTTATGAGATATAGAACTGATTTAGAAGGACTACAACAACAAGAGATTATTGATTCCCTTCCAAAAGCCATTCAGTCTAGCATCGCACACTACTTATTCTTTTCACTTATCGACAAAGTGTACTTATTTCATGGAGTGTCAAATGACCTGGTTTTTCAACTGGTCACAGAGATGAAGGCTGAGTATTTTCCTCCAAAGGAAGATGTGATTTTGCAAAATGAAGCACCAACAGAATTTTACATATTCGTTACAGGAGCTGCTGATCTGATCACTCACAACAATGGATTAGAACAGATTGTTGGAGAAGTAAGGCAAGGAGATGTAGTTGGTGAAATAGGAGTCTTGTGTTATAGGCCACAATTGTTCACAGTCCGAACCAAGCGATTGAGTCAAATCTTACGTTTGAATCGAACCACGTTTCTAAATCTTACTCATTCAAATGTTGGAGATGGAACAATGATCATAAACAATTTTCTCCAACATTTACATGAAATTGGGGGTCCAATTATGCAAGAAATTGTGGCAGAAGCAGAAGCAATGTTGGCTAGGGGAAAAATGGATTTGCCAATTAGTTTATTGTTTGCAGCAAGTAGAGGTGATGATATTATGTTGAATCAATTGTTAAAGAAAGGTTCAGATCCAAATGAACCTGATAAGAATGGAAAGACAGCATTGCATATTGCAGCTTGCAAAGGAAATGACCATTGTGTACTTGTGCTAGTAGAACATGGAGCAAATCCCAACATCAAAGACCTGGAAGGAAATTCGGCATTATGGGAAGCAGTTAAGGGTGGACATGAAACTGTGATGAGAATTCTTTTAGAAAATGGTGCAGAAATAACATCTGATGATGTAGTTGATTTTGCACGATTGGCTATTGAGAGAAACAACCTAGAAATTCTAAAGGAAATTATTGAACGTAAAGTGGAAGTGACACAAAGTGGTAGTAAAATGACCACACTGCTACATGCTGCAGTGTGTGAGGGAAATGTTGAAATAGTGAAGTACCTTGTAGAATTAGGAGCAGACATTGATGGAAAAGATAGTATTGGGTTGACTGCAAGATCCTTAGCAGAACATCAATGTCATGAAGAAATACTAAACGTTTTTAAGAAAATGGGACACAACAATAAACCAAATGCTCCTCTTCCTCCTATTTCATCCATTGTTGGTAGGTGTCAAAGTGAACCCACAATACCAGCCATTCCCCAACCCAACAAACCACCTAATAAAGAACTCAAGTGGTTTGATAAACATCAAAGAAGAAGGGTCAGCCCTTTCCACAATTCCTTTTTCGGAATCATGTCATCTGCAAATTATGCATCAAGAGATTCAACGGATTCTCCAAATTCATCTCAAGTGGGTCAAATAATTAAAGAGGAAGTAACAGCCAGAATAACAGTGAGTTGTCCAGAGAAAGGTGAAGGTGCGAAGAAGCTTATATTTTTGCCAGATTCTATTGAGGAATTGCTACGAATTGGTGCCAAAAAGTTTGGTTGTTCTCCGACCAAAATATTGACAACAGAAGGAGCTCAAATTGATGACATAGATATTGTAAGAGATGGTGATCATCTTGTTCTTGCATAG 2607 0.3893 MFGLCGRDDAKHEHDVNEREIEGREDGSQYSLTGVLLPSLGATAQNNGSRRPKLGRHVISPYDHNYRLWNKFLLILVFYTAWICPFEFGFLEKSKGALAITDNLVNGFFAADIVITFFVAYLDKSTYLLIDDHKLIALRYAKSWLILDVIACIPYEVVRSVLPPSLQSYSYLNVLRLWRLHRVSAMFARLEKDRNYSYFWVRCCKLTCVTLFSLHAAACFFYFLAARENPKNTWFSIIPSTIDQTIWGKYVISVYWSIVTLASVGYGDLHPVNTKEMIFAIFYMLFNLGLTSYLIGNMTNMVVHWTERTKRYRDTVQYASNFARRNRLPPRLQEQIFAHLLMRYRTDLEGLQQQEIIDSLPKAIQSSIAHYLFFSLIDKVYLFHGVSNDLVFQLVTEMKAEYFPPKEDVILQNEAPTEFYIFVTGAADLITHNNGLEQIVGEVRQGDVVGEIGVLCYRPQLFTVRTKRLSQILRLNRTTFLNLTHSNVGDGTMIINNFLQHLHEIGGPIMQEIVAEAEAMLARGKMDLPISLLFAASRGDDIMLNQLLKKGSDPNEPDKNGKTALHIAACKGNDHCVLVLVEHGANPNIKDLEGNSALWEAVKGGHETVMRILLENGAEITSDDVVDFARLAIERNNLEILKEIIERKVEVTQSGSKMTTLLHAAVCEGNVEIVKYLVELGADIDGKDSIGLTARSLAEHQCHEEILNVFKKMGHNNKPNAPLPPISSIVGRCQSEPTIPAIPQPNKPPNKELKWFDKHQRRRVSPFHNSFFGIMSSANYASRDSTDSPNSSQVGQIIKEEVTARITVSCPEKGEGAKKLIFLPDSIEELLRIGAKKFGCSPTKILTTEGAQIDDIDIVRDGDHLVLA 868
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun8g00816 868 ProSiteProfiles Ankyrin repeat profile. 593 625 IPR002110 GO:0005515
Viun8g00816 868 ProSiteProfiles Ankyrin repeat region circular profile. 560 591 - -
Viun8g00816 868 SMART ANK_2a 527 556 IPR002110 GO:0005515
Viun8g00816 868 SMART ANK_2a 560 589 IPR002110 GO:0005515
Viun8g00816 868 SMART ANK_2a 657 686 IPR002110 GO:0005515
Viun8g00816 868 SMART ANK_2a 593 622 IPR002110 GO:0005515
Viun8g00816 868 SMART ANK_2a 624 653 IPR002110 GO:0005515
Viun8g00816 868 Pfam KHA, dimerisation domain of potassium ion channel 805 867 IPR021789 -
Viun8g00816 868 PRINTS EAG/ELK/ERG potassium channel family signature 113 122 IPR003938 GO:0005249|GO:0006813|GO:0016020
Viun8g00816 868 PRINTS EAG/ELK/ERG potassium channel family signature 276 287 IPR003938 GO:0005249|GO:0006813|GO:0016020
Viun8g00816 868 PRINTS EAG/ELK/ERG potassium channel family signature 250 267 IPR003938 GO:0005249|GO:0006813|GO:0016020
Viun8g00816 868 PRINTS EAG/ELK/ERG potassium channel family signature 294 303 IPR003938 GO:0005249|GO:0006813|GO:0016020
Viun8g00816 868 PRINTS EAG/ELK/ERG potassium channel family signature 79 86 IPR003938 GO:0005249|GO:0006813|GO:0016020
Viun8g00816 868 PRINTS EAG/ELK/ERG potassium channel family signature 102 112 IPR003938 GO:0005249|GO:0006813|GO:0016020
Viun8g00816 868 Pfam Ankyrin repeats (3 copies) 631 688 IPR002110 GO:0005515
Viun8g00816 868 Pfam Ankyrin repeats (3 copies) 532 623 IPR002110 GO:0005515
Viun8g00816 868 CDD CAP_ED 382 487 IPR000595 -
Viun8g00816 868 FunFam Potassium channel KAT2 370 505 - -
Viun8g00816 868 Gene3D - 529 712 IPR036770 -
Viun8g00816 868 ProSiteProfiles Ankyrin repeat region circular profile. 593 624 - -
Viun8g00816 868 PANTHER POTASSIUM CHANNEL AKT1 28 867 IPR045319 GO:0005249|GO:0006813
Viun8g00816 868 ProSiteProfiles Ankyrin repeat region circular profile. 657 688 - -
Viun8g00816 868 PRINTS Ankyrin repeat signature 673 687 IPR002110 GO:0005515
Viun8g00816 868 PRINTS Ankyrin repeat signature 561 576 IPR002110 GO:0005515
Viun8g00816 868 Pfam Ion transport protein 67 309 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Viun8g00816 868 SUPERFAMILY Ankyrin repeat 531 715 IPR036770 -
Viun8g00816 868 Gene3D - 70 303 - -
Viun8g00816 868 SMART cnmp_10 382 499 IPR000595 -
Viun8g00816 868 SUPERFAMILY cAMP-binding domain-like 307 502 IPR018490 -
Viun8g00816 868 Pfam Cyclic nucleotide-binding domain 402 486 IPR000595 -
Viun8g00816 868 ProSiteProfiles Ankyrin repeat profile. 657 689 IPR002110 GO:0005515
Viun8g00816 868 ProSiteProfiles Ankyrin repeat profile. 560 592 IPR002110 GO:0005515
Viun8g00816 868 ProSiteProfiles KHA domain profile. 805 868 IPR021789 -
Viun8g00816 868 MobiDBLite consensus disorder prediction 1 26 - -
Viun8g00816 868 SUPERFAMILY Voltage-gated potassium channels 61 303 - -
Viun8g00816 868 Gene3D Jelly Rolls 348 504 IPR014710 -
Viun8g00816 868 ProSiteProfiles cAMP/cGMP binding motif profile. 382 501 IPR000595 -
Viun8g00816 868 FunFam Potassium channel KAT3 68 304 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun8g00816 Viun-Chr8 7236626 7245318 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun8g00816 28 868 Ion Channels AT2G25600 56.497 0.0 971
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun8g00816 K21867 - gmx:100808832 1344.72
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun8g00816 8 7236626 7245318 Viun8g00816 8 7236626 7245318 ECH