Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun8g00811 ATGGCAAAGAAGAAGAATTGTCCGGTATTTATGGATGTGTCCATAGATGGGGATCCGGTTGAAAGGATGGTTTTTGAGCTTTTCTATGATGTTGCTCCGAAGACTGCTGAAAATTTCCGTGCATTGTGCACAGGAGAAAAAGGAGTCGGTCCAAACACTGGAAAGTCACTACACTACAAGGGTTCTTTCTTTCATCAAATCGTTAAAGGCTCCATTACCCGGGGAGGTGATTTTGTAAACCGAAATGGGACTGGTGGAGAAAGCATTTATGGTTCCAAGTTCCCAGATGAATCACCTAGGCTAAAGCACGATGCTCCAGGCCTTCTTTCCATGCCAGTTGCTGATCGTGACACTCTTGGTTCTCATTTTATAATCACTTTTAAAGCTGATCCACATCTTGATAGGAAACATGTAATCTTTGGCAAGCTTGTGCAAGGACATAATATATTGAAGAAAATTGAAGATGTGGGTGATGAAGAAGGACTTCCAAGCGTAACTGTTAAAATAATTAATTGTGGTGAACATAATGAGGATGGAAAGAAGATAAATAAGTCAAAAAAGGGAAGAGATGGATCTACTGAAATCCATAGTCCTGAACTGCATAGGGGAAAGCACAAAAAATCTTCAGGTGACAAAAGGAAAAGGAGAAAGTATTACTCATCAGAATCGAGTAGTTCCTCAGATTCAGACACGAGTTCTTCAGAAAGTGATAGTGATTCTGACTCAGATACATCTTCATCTTTCACAAGTTCCTCCAGTGATGACAGGCGGAGAAAGAGAAAGAGGTCTAGGAAAGATAAACATAGACGAGGAAAAAGAAGAGAACAACACCGAGACAAGAGACGAAGGAAACAAGACAAAAGATCAAGACGCAAATCAAGAAGGGAATTGACCTGTCATACTGATTCAGATAGTGATAATAAGAGTGGCAACAGCTCTGGCGGTGAAAGTTGTGGTGCTCAAGCAAAAGATCAGAAGCATAAAGATCATTCTCAGAAGCATGCTGAAGGTCAGTCTTCCTTGGTTGTGGAGAAAGATTTACCAGCTGTGCTCCTTACAAAAGGGGAGAAATTGGATATGCTGGAGGAGGAAAAAATCCCAAATGAAAATGGAGAGCGGCGTAGCAATGGCAATGGAGCCAACTATAGATCTGACAGAAGTGAAGGCAGGCAGCCTGATGTGATGGATGATCAACCAGGCAAATCTAGGAGTCAAAGCATGAGTATTAGTCCAAAGCGTGAGAGCAGAAGTCCTAGCGTTAGTCGAAAAAGGAGGTTGAGCAGAAGTCCTAGTGGTAGTAGAAGCCCTCAAGCTCCATTACGGAGGAGTTTGAGCAGGAGTCCAAACAGAAGAAGCATCAGCAGAAGCCCAGCGAGAGGTAGAAAGGGAAAAAGTGTCAGTAAAAGCCCTGTCCGATCTCGTGGATATAGAAGTGTCAGTACAAGCCCTGTTAGATCCCTTTCTCGGAGCCACCAGAGGACTTCATCCAGAGTACCATCACGAAGATCAATCAGCAGAAGCCCTGTGATTAATCATAATCATAGAAGTGTCAGTAGAAGTCCTGTTAGATATCGTGATCATAGAAGTGTCAGTGTAAGCCCTGCAAGATCCCTTTCCCGGAGCCGCAAGAGTTCACCCAGAGCACGATCACAAAGATCAATCAGCAGAAGCCCTGTGAGAACACACAATCATAGAAGTGCCAATAGAAGCCCTGTAAGATCTAGTGGTCGGAGAAGTGTCAGTGCAAGCCCTGTGAGACCCCTTTCTCGGAGCCGGAGGAGGAGTTCACCCAGAGCACCATCTCGAAGATCAATCAGTAGAAGCCCAGTGAAAACTAATATTCGTAGAAATGTTAGTAGAAGCCCTGTGAGATCTCATGGTCATAGAAGTGCGAGTGCAAGTCCTGTAAGATCGCCTTCTCGGGGCCGCCGGAGGAATTCACCCAGAGCACAATCAAGAAGATCAATCAGCATAAGCCCTGTAAGAGTGTCCAGAAAGACTATAAGCAGGAGTCCAGTTAGATCATCTGCCAGAAGCATGAGCAGAAGTTTGAGCAGAAGCTCTGGCAGAGTCCCTTTAAGAAGCATTAGCCGAAGTCCAGCTAGAGTGCCAAGCAGAGGCAATCGCCACAGTTATTCTAGGAGTCCACGTGGTAGAAGCTTGTCTAGAAGTGTGTCACCTGATGTTTCCCCAAAACGTATTAGAAGGGGAAGAGGTTTCAGTGAACAGTACTCCTATGCTAGAAGGTATAGGACTCCCTCTCGATCTCCTGTGAGGTCGTACCGCTATAATGGAAGAAGTTACCGTGACAGATATTCAGGTTACAGGAGGTACTCCCCTAGGCGTAATAGGAGCCCACTGCCACGTAGAAGAACTCCACCAAGGTTCCGGAGGAGGAGCAGGACACCATCTGTATCACGCAGCCCGCGATATCGAGGTCGAGGTCGACGATATAGTCGAAGCCACAGCCGAAGCCCTGTTCGCAGTGGTTCACCTGTAGGTACATATCGACCTCGTGTTGAGAAGAGCAGGTCTTTGTCCAGGAGTAGAAGTCCATCACGATCCAGGGCTTCTATAGAATCACAATCTCCACTGAAGGCGAGCAGGAACAGTAGGTCAAGGTCCCCGTCTGAAAGCCCAGATGCAAAGAAAGGCCTTGTATCCTACGGAGATGGTTCTCCCTATTCAAACTAA 2694 0.4573 MAKKKNCPVFMDVSIDGDPVERMVFELFYDVAPKTAENFRALCTGEKGVGPNTGKSLHYKGSFFHQIVKGSITRGGDFVNRNGTGGESIYGSKFPDESPRLKHDAPGLLSMPVADRDTLGSHFIITFKADPHLDRKHVIFGKLVQGHNILKKIEDVGDEEGLPSVTVKIINCGEHNEDGKKINKSKKGRDGSTEIHSPELHRGKHKKSSGDKRKRRKYYSSESSSSSDSDTSSSESDSDSDSDTSSSFTSSSSDDRRRKRKRSRKDKHRRGKRREQHRDKRRRKQDKRSRRKSRRELTCHTDSDSDNKSGNSSGGESCGAQAKDQKHKDHSQKHAEGQSSLVVEKDLPAVLLTKGEKLDMLEEEKIPNENGERRSNGNGANYRSDRSEGRQPDVMDDQPGKSRSQSMSISPKRESRSPSVSRKRRLSRSPSGSRSPQAPLRRSLSRSPNRRSISRSPARGRKGKSVSKSPVRSRGYRSVSTSPVRSLSRSHQRTSSRVPSRRSISRSPVINHNHRSVSRSPVRYRDHRSVSVSPARSLSRSRKSSPRARSQRSISRSPVRTHNHRSANRSPVRSSGRRSVSASPVRPLSRSRRRSSPRAPSRRSISRSPVKTNIRRNVSRSPVRSHGHRSASASPVRSPSRGRRRNSPRAQSRRSISISPVRVSRKTISRSPVRSSARSMSRSLSRSSGRVPLRSISRSPARVPSRGNRHSYSRSPRGRSLSRSVSPDVSPKRIRRGRGFSEQYSYARRYRTPSRSPVRSYRYNGRSYRDRYSGYRRYSPRRNRSPLPRRRTPPRFRRRSRTPSVSRSPRYRGRGRRYSRSHSRSPVRSGSPVGTYRPRVEKSRSLSRSRSPSRSRASIESQSPLKASRNSRSRSPSESPDAKKGLVSYGDGSPYSN 897
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun8g00811 897 MobiDBLite consensus disorder prediction 701 727 - -
Viun8g00811 897 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 11 173 IPR002130 GO:0000413|GO:0003755
Viun8g00811 897 MobiDBLite consensus disorder prediction 471 517 - -
Viun8g00811 897 MobiDBLite consensus disorder prediction 651 694 - -
Viun8g00811 897 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 27 42 IPR002130 GO:0000413|GO:0003755
Viun8g00811 897 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 64 76 IPR002130 GO:0000413|GO:0003755
Viun8g00811 897 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 107 122 IPR002130 GO:0000413|GO:0003755
Viun8g00811 897 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 135 150 IPR002130 GO:0000413|GO:0003755
Viun8g00811 897 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 122 134 IPR002130 GO:0000413|GO:0003755
Viun8g00811 897 MobiDBLite consensus disorder prediction 568 590 - -
Viun8g00811 897 MobiDBLite consensus disorder prediction 222 251 - -
Viun8g00811 897 FunFam Peptidyl-prolyl cis-trans isomerase CYP95 1 182 - -
Viun8g00811 897 MobiDBLite consensus disorder prediction 782 823 - -
Viun8g00811 897 MobiDBLite consensus disorder prediction 321 335 - -
Viun8g00811 897 MobiDBLite consensus disorder prediction 430 454 - -
Viun8g00811 897 MobiDBLite consensus disorder prediction 601 641 - -
Viun8g00811 897 MobiDBLite consensus disorder prediction 850 875 - -
Viun8g00811 897 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 9 174 - -
Viun8g00811 897 MobiDBLite consensus disorder prediction 398 415 - -
Viun8g00811 897 SUPERFAMILY Cyclophilin-like 5 176 IPR029000 -
Viun8g00811 897 MobiDBLite consensus disorder prediction 257 294 - -
Viun8g00811 897 MobiDBLite consensus disorder prediction 176 897 - -
Viun8g00811 897 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 10 174 IPR002130 GO:0000413|GO:0003755
Viun8g00811 897 Gene3D - 1 175 IPR029000 -
Viun8g00811 897 MobiDBLite consensus disorder prediction 304 319 - -
Viun8g00811 897 MobiDBLite consensus disorder prediction 350 371 - -
Viun8g00811 897 MobiDBLite consensus disorder prediction 176 205 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun8g00811 Viun-Chr8 7151660 7158749 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun8g00811 25 170 U-box Gene Family AT5G67530 37.838 8.56e-19 89.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun8g00811 K09566 - gmx:100801588 714.146