Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun8g00806 ATGTTGTCCGAGTTGCAAGCCTTGTTCCATTTTCATATTTCCTGTGACCATGGGACTGGTGGAGAAAGCATATATGGTTCCAAGTTCCCAGACGAATCACCTCGGCTAAAGCATGATGCTCCCGGCCTTCTATCTATGCCTGTTGCTGTTCATGACACTCTTGGTTCTCATTTTATAATCACTTTTAAAGCTGATCCCCATCTTGATAGGAAACATGTGGTCTTTGGCAAGCTTGTGCAAGGGCATAATATATTGAAGAAAATTGAAGATGCGGGCAATGAAGAAGGACTTCCAAGCGTAACTGTTAAAATAATTAATTGTGGCGAACATAATGAGGATGGAAAGAAGATGAAGAAATCAAAAAGGGGAAGAGACGGGTTTCATGAAACCAATAATCATGAACTGCATAGGGGGAAGAACAAAAAACCTTCAGGAGACAAAAGGAAAAGGAGAAAGCATTACTCATCAGAATCTGATAGTTCCTCAGATTCAGACATGACATCTTCAGAAAGTGGTTGTGATTCTGACTCAGATATATCTTCATCATCTTACACAAGTTCCTCCAGTGATGATAGAAGGAGAAAGAGAAAGAGATCCAGGAAAGATAAGCATAGGCATCGAAAAAGAAGAGACAAACATCGAGAGAAGAGACGAAGGAAACAAAACAAAAAGTCAAAGCATAGATCAAGAAGGGAATTGACTACTCATACTGATTCAGACAGTGAAAGTAAGAGTGGCAACAACTCCGATGGTGAGAATTGTGGTGCTCAACTGAAAGATCAGAGGCATAAAGAACAATCTCAGGGATATGCCGAAGGTCAGTATTCCTTAGTCGTGGAGAAAGAATTACCTCCCATGCACCTTAACAAGGAGAAATTGGATATGCTAGAGGAAGAATTCCCAAAGGAGTATGAAGAACAATGTAACAGTGGCACTCGAGCCAACTATAGATCTGACAGAAGTGAAAGGAGGCAGCCTGATGTGATGGATGATCAACCTGGCAAATCTAGGAGTCCAAGCATGAGTATTAGTCCCCGGAGAGAGAGGAAAAGCCCAAGTTGTTCAAAGATGAGGTTGAGAAGAGGTCCAAGTGGCAATGGAAGCCATTGTGCTCCATCACAGAGTAGCTTGAGTCGGAGTCCGGTTAAAAGCACAAGCAAAAGTCCAAACAGGAGAAACATAAGTAGAAGCCCAGTGAGAGGTAGGAAGGGGAGAAGTTTCAGTAGAAGCCCTGTAAGATCTCGTGGACATAGAAGTGTTAGTGCAAGCCCTGTAAGATCCCTTTCTCAGAAGCACCAGAAGACTCCACCCAAAACAGCATCACGAAGATCAATCAGCAGAAGTCCTGGAAGATCCCTTTCTCAGAGTCGCGGAAGGAGTTCACGCAGAGTACCATCACGGACATCAATAAGCAAAAGCCCTGTGAGAAATCACAACCATAAAAGTATTAGTAGAAGCCCAAGATCTCGTGGTCGGAGAAGTGCGAGTGCAAGTCCTGTAAGATCCCTTTCTCGAAGCCAACAGAGTTCACCCAAAGCTTCATCACGAAGATCAATCAGCAAAAGCCCTGTGAGAACTCTCAATCATAGAAGTGTCAATAGAAGCCCTCTGAGATCTCGTGGTCATAGTCATAGAAGTGTCGGTGAAAGCCCTGTAAGATCTCTCTCTCGGAGCCATGGGAGGACTTCACCAAGAGCAGAATCACGGAGATCAATCGGTAGAAGCCCTGTGAGAACTGACAATCATAGAAGTGTAAGTAGAAGCCCTGTAAGATCTCGTGACCATAGAAGTGCTAGTGTAAGCCCGGTCAGGTCACTCTCTCGGGGCCACCAGAGGAGTTCATCTAGAGAACCATCACGAAGATCAATAAGCAGAAGCCCAGTAAAAGTGTCAAGAAAGAGTATAAGCAGGAGTCCAGTTAGATCATCTGCCAGAAACTCTGGCAGAGTTCCTCTAAGAAGTATTAGCCGAAGTCCAGTTCGAGTGCCAAGCAGAGGTAATCACCGCAGTTATTCTAGGAGTCCTCGTGGTAGGAGCTTGTCTAGAAGTCTTTCACCTGATGTTTCCCCAAAACGTATCAGAAGGGGAAGAGGCTTCAGTGAACGATACTCTTATGCTAGAAGGTATAGGACTCCCTCTCAATCTCCTGTGAGATCATACCGCTATAATGGAAGAAGCGACCGTGACAGATATTCAGATTACAGAAGGTACTCCCCTAGGCGTAACAGGAGCCCACCACCACGCAGAAGAACCCCACCAAGGTTCCGGAGTAGGAGGAGCAGGACACCATCTGTATCACGCAGCCCACCTTATACAGGTCGACGATACAGTCGAAGCCGTAGCCCTGTCCCCAGTCGTTCCCCTATGGCCACTGATCGACGTCGCGGTGAGAGGAGCCGGTCTTTGTCCCGGAGCAGGAGCCCTTCACGATCCAGGGCTTCGGTGGAGTCACAATCTCCACGAAAGAACAGCAGGTCAAGGTCCCGGTCCTCAGATGGAAAGAAAGGCCTTGTATCTTACGGAGATGGTTCTCCTGATTCAGATTAA 2547 0.4594 MLSELQALFHFHISCDHGTGGESIYGSKFPDESPRLKHDAPGLLSMPVAVHDTLGSHFIITFKADPHLDRKHVVFGKLVQGHNILKKIEDAGNEEGLPSVTVKIINCGEHNEDGKKMKKSKRGRDGFHETNNHELHRGKNKKPSGDKRKRRKHYSSESDSSSDSDMTSSESGCDSDSDISSSSYTSSSSDDRRRKRKRSRKDKHRHRKRRDKHREKRRRKQNKKSKHRSRRELTTHTDSDSESKSGNNSDGENCGAQLKDQRHKEQSQGYAEGQYSLVVEKELPPMHLNKEKLDMLEEEFPKEYEEQCNSGTRANYRSDRSERRQPDVMDDQPGKSRSPSMSISPRRERKSPSCSKMRLRRGPSGNGSHCAPSQSSLSRSPVKSTSKSPNRRNISRSPVRGRKGRSFSRSPVRSRGHRSVSASPVRSLSQKHQKTPPKTASRRSISRSPGRSLSQSRGRSSRRVPSRTSISKSPVRNHNHKSISRSPRSRGRRSASASPVRSLSRSQQSSPKASSRRSISKSPVRTLNHRSVNRSPLRSRGHSHRSVGESPVRSLSRSHGRTSPRAESRRSIGRSPVRTDNHRSVSRSPVRSRDHRSASVSPVRSLSRGHQRSSSREPSRRSISRSPVKVSRKSISRSPVRSSARNSGRVPLRSISRSPVRVPSRGNHRSYSRSPRGRSLSRSLSPDVSPKRIRRGRGFSERYSYARRYRTPSQSPVRSYRYNGRSDRDRYSDYRRYSPRRNRSPPPRRRTPPRFRSRRSRTPSVSRSPPYTGRRYSRSRSPVPSRSPMATDRRRGERSRSLSRSRSPSRSRASVESQSPRKNSRSRSRSSDGKKGLVSYGDGSPDSD 848
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun8g00806 848 MobiDBLite consensus disorder prediction 413 477 - -
Viun8g00806 848 MobiDBLite consensus disorder prediction 660 686 - -
Viun8g00806 848 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 20 108 IPR002130 GO:0000413|GO:0003755
Viun8g00806 848 MobiDBLite consensus disorder prediction 762 786 - -
Viun8g00806 848 Gene3D - 11 111 IPR029000 -
Viun8g00806 848 MobiDBLite consensus disorder prediction 624 653 - -
Viun8g00806 848 MobiDBLite consensus disorder prediction 396 412 - -
Viun8g00806 848 MobiDBLite consensus disorder prediction 722 740 - -
Viun8g00806 848 MobiDBLite consensus disorder prediction 806 821 - -
Viun8g00806 848 MobiDBLite consensus disorder prediction 193 230 - -
Viun8g00806 848 MobiDBLite consensus disorder prediction 284 306 - -
Viun8g00806 848 MobiDBLite consensus disorder prediction 688 704 - -
Viun8g00806 848 MobiDBLite consensus disorder prediction 111 141 - -
Viun8g00806 848 MobiDBLite consensus disorder prediction 367 395 - -
Viun8g00806 848 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 16 109 - -
Viun8g00806 848 SUPERFAMILY Cyclophilin-like 15 111 IPR029000 -
Viun8g00806 848 MobiDBLite consensus disorder prediction 790 804 - -
Viun8g00806 848 Coils Coil 203 223 - -
Viun8g00806 848 MobiDBLite consensus disorder prediction 741 761 - -
Viun8g00806 848 MobiDBLite consensus disorder prediction 707 721 - -
Viun8g00806 848 MobiDBLite consensus disorder prediction 111 848 - -
Viun8g00806 848 MobiDBLite consensus disorder prediction 489 534 - -
Viun8g00806 848 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 57 69 IPR002130 GO:0000413|GO:0003755
Viun8g00806 848 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 42 57 IPR002130 GO:0000413|GO:0003755
Viun8g00806 848 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 70 85 IPR002130 GO:0000413|GO:0003755
Viun8g00806 848 MobiDBLite consensus disorder prediction 560 598 - -
Viun8g00806 848 MobiDBLite consensus disorder prediction 160 187 - -
Viun8g00806 848 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 1 109 IPR002130 GO:0000413|GO:0003755
Viun8g00806 848 MobiDBLite consensus disorder prediction 231 245 - -
Viun8g00806 848 MobiDBLite consensus disorder prediction 316 331 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun8g00806 Viun-Chr8 7117252 7129231 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun8g00806 18 105 U-box Gene Family AT5G67530 40.000 2.70e-09 58.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun8g00806 K09566 - gmx:100801588 598.586