Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun8g00805 ATGACAAAGAAGAAGAATTCTCTGGTGTTTATGGATGTGTCCATAGATGGGGATCCTGCTGAAAGGATGAGTTTTGAGCTCTTCTATGATGTTGCTCCAAAAACTGCTGAAAATTTTCGTGCATTATGCACAGGTGAAAGGGGTGTTAGTCCAAATAGTGGAAAATCACTGCACTACAAGGGGACTTTCTTCCATCGAATTGTAAGAGGATCCGTTGCCCGGGGTGGTGATTTTGTGAATCGAAATGGGACTGGTGGAGAAAGCATATATGGTTCCAAGTTCCCAGACGAATCACCTCGGCTAAAGCATGATGCTCCCGGCCTTCTATCTATGCCTGTTGCTGTTCATGACACTCTTGGTTCTCATTTTATAATCACTTTTAAAGCTGATCCCCATCTTGATAGGAAACATGTGGTCTTTGGCAAGCTTGTGCAAGGGCATAATATATTGAAGAAAATTGAAGATGCGGGCAATGAAGAAGGACTTCCAAGCGTAACTGTTAAAATAATTAATTGTGGCGAACATAATGAGGATGGAAAGAAGATGAAGAAATCAAAAAGGGGAAGAGACGGGTTTCATGAAACCAATAATCATGAACTGCATAGGGGGAAGAACAAAAAACCTTCAGGAGACAAAAGGAAAAGGAGAAAGCATTACTCATCAGAATCTGATAGTTCCTCAGATTCAGACATGACATCTTCAGAAAGTGGTTGTGATTCTGACTCAGATATATCTTCATCATCTTACACAAGTTCCTCCAGTGATGATAGAAGGAGAAAGAGAAAGAGATCCAGGAAAGATAAGCATAGGCATCGAAAAAGAAGAGACAAACATCGAGAGAAGAGACGAAGGAAACAAAACAAAAAGTCAAAGCATAGATCAAGAAGGGAATTGACTACTCATACTGATTCAGACAGTGAAAGTAAGAGTGGCAACAACTCCGATGGTGAGAATTGTGGTGCTCAACTGAAAGATCAGAGGCATAAAGAACAATCTCAGGGATATGCCGAAGGTCAGTATTCCTTAGTCGTGGAGAAAGAATTACCTCCCATGCACCTTAACAAGGAGAAATTGGATATGCTAGAGGAAGAATTCCCAAAGGAGTATGAAGAACAATGTAACAGTGGCACTCGAGCCAACTATAGATCTGACAGAAGTGAAAGGAGGCAGCCTGATGTGATGGATGATCAACCTGGCAAATCTAGGAGTCCAAGCATGAGTATTAGTCCCCGGAGAGAGAGGAAAAGCCCAAGTTGTTCAAAGATGAGGTTGAGAAGAGGTCCAAGTGGCAATGGAAGCCATTGTGCTCCATCACAGAGTAGCTTGAGTCGGAGTCCGGTTAAAAGCACAAGCAAAAGTCCAAACAGGAGAAACATAAGTAGAAGCCCAGTGAGAGGTAGGAAGGGGAGAAGTTTCAGTAGAAGCCCTGTAAGATCTCGTGGACATAGAAGTGTTAGTGCAAGCCCTGTAAGATCCCTTTCTCAGAAGCACCAGAAGACTCCACCCAAAACAGCATCACGAAGATCAATCAGCAGAAGTCCTGGAAGATCCCTTTCTCAGAGTCGCGGAAGGAGTTCACGCAGAGTACCATCACGGACATCAATAAGCAAAAGCCCTGTGAGAAATCACAACCATAAAAGTATTAGTAGAAGCCCAAGATCTCGTGGTCGGAGAAGTGCGAGTGCAAGTCCTGTAAGATCCCTTTCTCGAAGCCAACAGAGTTCACCCAAAGCTTCATCACGAAGATCAATCAGCAAAAGCCCTGTGAGAACTCTCAATCATAGAAGTGTCAATAGAAGCCCTCTGAGATCTCGTGGTCATAGTCATAGAAGTGTCGGTGAAAGCCCTGTAAGATCTCTCTCTCGGAGCCATGGGAGGACTTCACCAAGAGCAGAATCACGGAGATCAATCGGTAGAAGCCCTGTGAGAACTGACAATCATAGAAGTGTAAGTAGAAGCCCTGTAAGATCTCGTGACCATAGAAGTGCTAGTGTAAGCCCGGTCAGGTCACTCTCTCGGGGCCACCAGAGGAGTTCATCTAGAGAACCATCACGAAGATCAATAAGCAGAAGCCCAGTAAAAGTGTCAAGAAAGAGTATAAGCAGGAGTCCAGTTAGATCATCTGCCAGAAACTCTGGCAGAGTTCCTCTAAGAAGTATTAGCCGAAGTCCAGTTCGAGTGCCAAGCAGAGGTAATCACCGCAGTTATTCTAGGAGTCCTCGTGGTAGGAGCTTGTCTAGAAGTCTTTCACCTGATGTTTCCCCAAAACGTATCAGAAGGGGAAGAGGCTTCAGTGAACGATACTCTTATGCTAGAAGGTATAGGACTCCCTCTCAATCTCCTGTGAGATCATACCGCTATAATGGAAGAAGCGACCGTGACAGATATTCAGATTACAGAAGGTACTCCCCTAGGCGTAACAGGAGCCCACCACCACGCAGAAGAACCCCACCAAGGTTCCGGAGTAGGAGGAGCAGGACACCATCTGTATCACGCAGCCCACCTTATACAGGTCGACGATACAGTCGAAGCCGTAGCCCTGTCCCCAGTCGTTCCCCTATGGCCACTGATCGACGTCGCGGTGAGAGGAGCCGGTCTTTGTCCCGGAGCAGGAGCCCTTCACGATCCAGGGCTTCGGTGGAGTCACAATCTCCACGAAAGAACAGCAGGTCAAGGTCCCGGTCCTCAGATGGAAAGAAAGGCCTTGTATCTTACGGAGATGGTTCTCCTGATTCAGATTAA 2742 0.457 MTKKKNSLVFMDVSIDGDPAERMSFELFYDVAPKTAENFRALCTGERGVSPNSGKSLHYKGTFFHRIVRGSVARGGDFVNRNGTGGESIYGSKFPDESPRLKHDAPGLLSMPVAVHDTLGSHFIITFKADPHLDRKHVVFGKLVQGHNILKKIEDAGNEEGLPSVTVKIINCGEHNEDGKKMKKSKRGRDGFHETNNHELHRGKNKKPSGDKRKRRKHYSSESDSSSDSDMTSSESGCDSDSDISSSSYTSSSSDDRRRKRKRSRKDKHRHRKRRDKHREKRRRKQNKKSKHRSRRELTTHTDSDSESKSGNNSDGENCGAQLKDQRHKEQSQGYAEGQYSLVVEKELPPMHLNKEKLDMLEEEFPKEYEEQCNSGTRANYRSDRSERRQPDVMDDQPGKSRSPSMSISPRRERKSPSCSKMRLRRGPSGNGSHCAPSQSSLSRSPVKSTSKSPNRRNISRSPVRGRKGRSFSRSPVRSRGHRSVSASPVRSLSQKHQKTPPKTASRRSISRSPGRSLSQSRGRSSRRVPSRTSISKSPVRNHNHKSISRSPRSRGRRSASASPVRSLSRSQQSSPKASSRRSISKSPVRTLNHRSVNRSPLRSRGHSHRSVGESPVRSLSRSHGRTSPRAESRRSIGRSPVRTDNHRSVSRSPVRSRDHRSASVSPVRSLSRGHQRSSSREPSRRSISRSPVKVSRKSISRSPVRSSARNSGRVPLRSISRSPVRVPSRGNHRSYSRSPRGRSLSRSLSPDVSPKRIRRGRGFSERYSYARRYRTPSQSPVRSYRYNGRSDRDRYSDYRRYSPRRNRSPPPRRRTPPRFRSRRSRTPSVSRSPPYTGRRYSRSRSPVPSRSPMATDRRRGERSRSLSRSRSPSRSRASVESQSPRKNSRSRSRSSDGKKGLVSYGDGSPDSD 913
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun8g00805 913 MobiDBLite consensus disorder prediction 176 206 - -
Viun8g00805 913 MobiDBLite consensus disorder prediction 753 769 - -
Viun8g00805 913 MobiDBLite consensus disorder prediction 381 396 - -
Viun8g00805 913 MobiDBLite consensus disorder prediction 871 886 - -
Viun8g00805 913 MobiDBLite consensus disorder prediction 554 599 - -
Viun8g00805 913 MobiDBLite consensus disorder prediction 461 477 - -
Viun8g00805 913 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 122 134 IPR002130 GO:0000413|GO:0003755
Viun8g00805 913 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 107 122 IPR002130 GO:0000413|GO:0003755
Viun8g00805 913 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 27 42 IPR002130 GO:0000413|GO:0003755
Viun8g00805 913 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 64 76 IPR002130 GO:0000413|GO:0003755
Viun8g00805 913 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 135 150 IPR002130 GO:0000413|GO:0003755
Viun8g00805 913 MobiDBLite consensus disorder prediction 225 252 - -
Viun8g00805 913 FunFam Peptidyl-prolyl cis-trans isomerase CYP95 1 182 - -
Viun8g00805 913 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 10 174 IPR002130 GO:0000413|GO:0003755
Viun8g00805 913 MobiDBLite consensus disorder prediction 296 310 - -
Viun8g00805 913 MobiDBLite consensus disorder prediction 625 663 - -
Viun8g00805 913 Gene3D - 1 175 IPR029000 -
Viun8g00805 913 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 9 174 - -
Viun8g00805 913 MobiDBLite consensus disorder prediction 855 869 - -
Viun8g00805 913 MobiDBLite consensus disorder prediction 772 786 - -
Viun8g00805 913 MobiDBLite consensus disorder prediction 806 826 - -
Viun8g00805 913 MobiDBLite consensus disorder prediction 689 718 - -
Viun8g00805 913 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 11 173 IPR002130 GO:0000413|GO:0003755
Viun8g00805 913 MobiDBLite consensus disorder prediction 725 751 - -
Viun8g00805 913 MobiDBLite consensus disorder prediction 478 542 - -
Viun8g00805 913 MobiDBLite consensus disorder prediction 827 851 - -
Viun8g00805 913 MobiDBLite consensus disorder prediction 176 913 - -
Viun8g00805 913 MobiDBLite consensus disorder prediction 349 371 - -
Viun8g00805 913 Coils Coil 268 288 - -
Viun8g00805 913 MobiDBLite consensus disorder prediction 258 295 - -
Viun8g00805 913 MobiDBLite consensus disorder prediction 432 460 - -
Viun8g00805 913 MobiDBLite consensus disorder prediction 787 805 - -
Viun8g00805 913 SUPERFAMILY Cyclophilin-like 4 176 IPR029000 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun8g00805 Viun-Chr8 7117252 7130009 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun8g00805 23 170 U-box Gene Family AT5G67530 38.667 1.61e-19 91.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun8g00805 K09566 - gmx:100800303 704.131