Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun8g00802 ATGTTGTCCGAGTTGCAAGCCATGTTCCATTTTCATGTTTGCTGTGACAATGGGACTGGTGGAGAAAGCATATATGGTTCCAAGTTCCCAGATGAATCACCTAGGCTAAAGCATGATGCTCCTGGCCTTCTTTCAATGCCAGTTGCTGATCGTGACACTCTTGGTTCTCATTTTATAATCACTTTTAAAGCTGATCCCCATCTTGATAGGAAACATGTAGTGTTTGGCAAGCTTGTACTAGGACATGATATATTGAAGAAAATTGAAGATGTGGGTGATAAAGAAGGACTTCCAAGCGTGACTGTTAAAATAATTAATTGTGGTGAACATAATGAGGATGAAAAGAAGATAAATAAATCAAAAAAGGGAAGAGATGGATCTTCTGAAACAAATAGTCATGAACTGCATAAGGGAAAGCATCGAAAATCTTCAGGTGACAAAAGGAAAAGGAGAAAGTACTACTCATCAGAATCTGATAGTTCCTCAGATTCAGACACAAAATCTTCCGAAAGTGATAGTGATTCTGACTCTGATATATCTTCATCATCGTACACAAGTTCCTCCAGCGATGATAGGCGGAGAAAGAGAAAGAGGTCTAGGAAAGATAAACATAGACGTGGAAAAAAAAGAGATAAACACAGAGAAAAGAGACGAAGGAAGCAAGATAAAAGATCAAAGCGTAGATCAAGGAGGGAATTGTCCAGTCATACTGATTCAGATAGTGAAAATAAGAGCAACAAATGCTCTGATAGTGAAAGTTGTGGTGCCGAAGTGAATGATCAGAATCATGAAGACCATTCTCAGAGACATGCTGAAGGTCAGTCTTCCTCAGTTGTCGAGAAAGAATTACCTCCAATGCACCCTAAAAAGAGGGAGAAACTGGATATATTGAAAGAGGAAGAATTCCCAAAGGAAAATGGAGAGCGGTGTAGCAATGGAACTGGAGCCAACTATAGATCTGAAAGAAGTGAAGTGAGGCAGCCTGATGTGATGGATGATCAACCAGACAAATCTAGGAGTCAAAGCACGAGTGTTAGTCCGAGGAAGCGCAAGAGCAAAAGCCCAAGCATTAGTCCAAAAGGGAAGTTGAACAGAAGTCCAAGTGGCAGTAGAAGTCCTCATGCTCCATTACAGAGGAGTTTGAGCCAGAGTCCTGTTAGAAGCACAAGCAGGAGTCCAAATAGAAGAAGCGTCAGTAGAAGCCCAATGAGAGGTAGGAAAGGTAGAAGTATCAGTAGAAGCTCTGTAAGACGTTATGGACATCAAAGTGTCAGCACAAGCCCTGTAAGACCCCTTTCTCGGAGCTACCAAAGGACTTCACCAAAAACATCATCACGAAGATCAATCAGCCGAAGCCCTACGATATCTCCTGGTCAAAGAAGTGTCAGTGTAAGCCCAGGAAGATCCCCTTCTCGGAGCCAAAGAAGGAGTTCACTCAAAGCACCATCACGGCGATCAATCAGCAGAAGCCCAGTAAGAAATCGCCGACTTGGAAGTGTCAGTAGAAGCCCTTCAAGATCTCAAGGTCGTAGAAGTGATAGTGGAAGCCCTATAAGATCCCTTACACCAAGTCATCGTATATCACCCAGAACAAAATCTAGAAGATCAATCAGCAGAAGCCCTGTGAGAACTCGCAACCATAAAAGTATCAGCAAAGGCACCTCAAGATCTCGTGGTCATAGAACTAGCAGTGGAAGCCCTGTAAGATCCCTTTCTCGAAGTGGCCGTAGGAGTTCACCAAGAGCACCTTCGCGAAGATCAATCAGTAGAAGCCCTGTGAAAACTGGCAATCATAGAAGTGTAAGTAGAAGCCCCTTGCGATCTCATGGTCAAAGAAGTGTGAGTGCTAGCCCTGTTAGATCACCTTCATGGGAACGCCGAAGGAGTTCACCAAGAGCACCGTCACGGAGATTGATCAGTAGAAGTCCAGTAAGAGTGTCAAGAAAGAGTTTAAGCAGGAGTCCAGTTCGATCATCTGCCAGAAGCTTGAGCAGAAGCTCTGGCAGAGTCCCTTTGAGAAGCAATAGTCGCAGTCCAGTTAGAGGGCCAAGCAGAGTCCCTTTGAGAAGCATTAGTCGCAGTCCAGTTAGAGGGCCAAGCAGAGTCAATCGCCGCAGTTATTCCAGGAGTCCTCGTGGTAGGAGCTTGTCTAGAAGTTTGTCACCTGATGTTTCCCCAAAACGTATCAGAAGGGGAAGAGGTTTTAGTGAACGATATTCTTATGCTAGAAGGTATAGGACTCCCTCTCGATCTCCTGTGAGATCATACCGCTATAATGGAAGAAGTGACCGTGACAGATATTCAGGTTACAGAAGGTACTCCCCTAGGCGTAACAGGAGCCCACCACCACGCAGAAGAACCCCACCAAGGTTCCGCAGTAGGAGGAGCAGGACACCATCCGTTTCTCGCAGCCCACGTTATAGAGGTCGACGATACAGTCGAAGCCGTAGCCCTGTACGCAGTCGTTCACCTGCTGGCGCGTATCGACGTCGTGTTGAGAGGAGCAGGTCCTTGTCCCGGAGTAGCAGGTCTCTGTCCCGGAGCAGGAGTCCATCACTATCCAGGGCTTCAGTGGAGTCACAATCTCCACGAAAGAACAGCAGGTCAAGGTCCCGGTCCCAAAGCTCGGATGGAAAGAAAGGCCTTGTATCGTACGGAGATGGTTCTCCAGATTCAAGCTGA 2682 0.4582 MLSELQAMFHFHVCCDNGTGGESIYGSKFPDESPRLKHDAPGLLSMPVADRDTLGSHFIITFKADPHLDRKHVVFGKLVLGHDILKKIEDVGDKEGLPSVTVKIINCGEHNEDEKKINKSKKGRDGSSETNSHELHKGKHRKSSGDKRKRRKYYSSESDSSSDSDTKSSESDSDSDSDISSSSYTSSSSDDRRRKRKRSRKDKHRRGKKRDKHREKRRRKQDKRSKRRSRRELSSHTDSDSENKSNKCSDSESCGAEVNDQNHEDHSQRHAEGQSSSVVEKELPPMHPKKREKLDILKEEEFPKENGERCSNGTGANYRSERSEVRQPDVMDDQPDKSRSQSTSVSPRKRKSKSPSISPKGKLNRSPSGSRSPHAPLQRSLSQSPVRSTSRSPNRRSVSRSPMRGRKGRSISRSSVRRYGHQSVSTSPVRPLSRSYQRTSPKTSSRRSISRSPTISPGQRSVSVSPGRSPSRSQRRSSLKAPSRRSISRSPVRNRRLGSVSRSPSRSQGRRSDSGSPIRSLTPSHRISPRTKSRRSISRSPVRTRNHKSISKGTSRSRGHRTSSGSPVRSLSRSGRRSSPRAPSRRSISRSPVKTGNHRSVSRSPLRSHGQRSVSASPVRSPSWERRRSSPRAPSRRLISRSPVRVSRKSLSRSPVRSSARSLSRSSGRVPLRSNSRSPVRGPSRVPLRSISRSPVRGPSRVNRRSYSRSPRGRSLSRSLSPDVSPKRIRRGRGFSERYSYARRYRTPSRSPVRSYRYNGRSDRDRYSGYRRYSPRRNRSPPPRRRTPPRFRSRRSRTPSVSRSPRYRGRRYSRSRSPVRSRSPAGAYRRRVERSRSLSRSSRSLSRSRSPSLSRASVESQSPRKNSRSRSRSQSSDGKKGLVSYGDGSPDSS 893
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun8g00802 893 MobiDBLite consensus disorder prediction 337 399 - -
Viun8g00802 893 MobiDBLite consensus disorder prediction 283 307 - -
Viun8g00802 893 Gene3D - 8 111 IPR029000 -
Viun8g00802 893 MobiDBLite consensus disorder prediction 724 744 - -
Viun8g00802 893 MobiDBLite consensus disorder prediction 400 414 - -
Viun8g00802 893 MobiDBLite consensus disorder prediction 826 840 - -
Viun8g00802 893 MobiDBLite consensus disorder prediction 150 174 - -
Viun8g00802 893 MobiDBLite consensus disorder prediction 257 271 - -
Viun8g00802 893 MobiDBLite consensus disorder prediction 112 136 - -
Viun8g00802 893 MobiDBLite consensus disorder prediction 231 247 - -
Viun8g00802 893 MobiDBLite consensus disorder prediction 777 801 - -
Viun8g00802 893 MobiDBLite consensus disorder prediction 645 681 - -
Viun8g00802 893 MobiDBLite consensus disorder prediction 696 722 - -
Viun8g00802 893 MobiDBLite consensus disorder prediction 193 230 - -
Viun8g00802 893 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 17 109 IPR002130 GO:0000413|GO:0003755
Viun8g00802 893 MobiDBLite consensus disorder prediction 556 624 - -
Viun8g00802 893 MobiDBLite consensus disorder prediction 415 527 - -
Viun8g00802 893 MobiDBLite consensus disorder prediction 528 555 - -
Viun8g00802 893 MobiDBLite consensus disorder prediction 841 869 - -
Viun8g00802 893 SUPERFAMILY Cyclophilin-like 14 113 IPR029000 -
Viun8g00802 893 MobiDBLite consensus disorder prediction 112 893 - -
Viun8g00802 893 MobiDBLite consensus disorder prediction 757 772 - -
Viun8g00802 893 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 20 108 IPR002130 GO:0000413|GO:0003755
Viun8g00802 893 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 42 57 IPR002130 GO:0000413|GO:0003755
Viun8g00802 893 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 57 69 IPR002130 GO:0000413|GO:0003755
Viun8g00802 893 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 70 85 IPR002130 GO:0000413|GO:0003755
Viun8g00802 893 MobiDBLite consensus disorder prediction 322 336 - -
Viun8g00802 893 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 16 109 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun8g00802 Viun-Chr8 7101498 7107709 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun8g00802 18 105 U-box Gene Family AT5G67530 41.111 6.16e-10 60.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun8g00802 K09566 - gmx:100801588 429.483