Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun8g00800 ATGTACAGGAGAAAGGGGAGTTGGTCCAAATACTGGAAAATCACTGCACTACAAGGGTTCTTTCTTCCATCGAATTGTGAAAGGCTCCATTGCCCGGGATACAGGGCTGATGGTCACGACTTCCTTTCTTGTGATATAGTTTTAAGGGTGGTGATTTTGTCAATCGAAATGTTGTCCGAGTTGCAAGCCATGTTCCATTTTCATGTTTGCTGTGACAATGGGACTGGTGGAGAAAGCATATATGGTTCCAAGTTCCCAGATGAATCACCTAGGCTAAAGCATGATGCTCCTGGCCTTCTTTCAATGCCAGTTGCTGATCGTGACACTCTTGGTTCTCATTTTATAATCACTTTTAAAGCTGATCCCCATCTTGATAGGAAACATGTAGTGTTTGGCAAGCTTGTACTAGGACATGATATATTGAAGAAAATTGAAGATGTGGGTGATAAAGAAGGACTTCCAAGCGTGACTGTTAAAATAATTAATTGTGGTGAACATAATGAGGATGAAAAGAAGATAAATAAATCAAAAAAGGGAAGAGATGGATCTTCTGAAACAAATAGTCATGAACTGCATAAGGGAAAGCATCGAAAATCTTCAGGTGACAAAAGGAAAAGGAGAAAGTACTACTCATCAGAATCTGATAGTTCCTCAGATTCAGACACAAAATCTTCCGAAAGTGATAGTGATTCTGACTCTGATATATCTTCATCATCGTACACAAGTTCCTCCAGCGATGATAGGCGGAGAAAGAGAAAGAGGTCTAGGAAAGATAAACATAGACGTGGAAAAAAAAGAGATAAACACAGAGAAAAGAGACGAAGGAAGCAAGATAAAAGATCAAAGCGTAGATCAAGGAGGGAATTGTCCAGTCATACTGATTCAGATAGTGAAAATAAGAGCAACAAATGCTCTGATAGTGAAAGTTGTGGTGCCGAAGTGAATGATCAGAATCATGAAGACCATTCTCAGAGACATGCTGAAGGTCAGTCTTCCTCAGTTGTCGAGAAAGAATTACCTCCAATGCACCCTAAAAAGAGGGAGAAACTGGATATATTGAAAGAGGAAGAATTCCCAAAGGAAAATGGAGAGCGGTGTAGCAATGGAACTGGAGCCAACTATAGATCTGAAAGAAGTGAAGTGAGGCAGCCTGATGTGATGGATGATCAACCAGACAAATCTAGGAGTCAAAGCACGAGTGTTAGTCCGAGGAAGCGCAAGAGCAAAAGCCCAAGCATTAGTCCAAAAGGGAAGTTGAACAGAAGTCCAAGTGGCAGTAGAAGTCCTCATGCTCCATTACAGAGGAGTTTGAGCCAGAGTCCTGTTAGAAGCACAAGCAGGAGTCCAAATAGAAGAAGCGTCAGTAGAAGCCCAATGAGAGGTAGGAAAGGTAGAAGTATCAGTAGAAGCTCTGTAAGACGTTATGGACATCAAAGTGTCAGCACAAGCCCTGTAAGACCCCTTTCTCGGAGCTACCAAAGGACTTCACCAAAAACATCATCACGAAGATCAATCAGCCGAAGCCCTACGATATCTCCTGGTCAAAGAAGTGTCAGTGTAAGCCCAGGAAGATCCCCTTCTCGGAGCCAAAGAAGGAGTTCACTCAAAGCACCATCACGGCGATCAATCAGCAGAAGCCCAGTAAGAAATCGCCGACTTGGAAGTGTCAGTAGAAGCCCTTCAAGATCTCAAGGTCGTAGAAGTGATAGTGGAAGCCCTATAAGATCCCTTACACCAAGTCATCGTATATCACCCAGAACAAAATCTAGAAGATCAATCAGCAGAAGCCCTGTGAGAACTCGCAACCATAAAAGTATCAGCAAAGGCACCTCAAGATCTCGTGGTCATAGAACTAGCAGTGGAAGCCCTGTAAGATCCCTTTCTCGAAGTGGCCGTAGGAGTTCACCAAGAGCACCTTCGCGAAGATCAATCAGTAGAAGCCCTGTGAAAACTGGCAATCATAGAAGTGTAAGTAGAAGCCCCTTGCGATCTCATGGTCAAAGAAGTGTGAGTGCTAGCCCTGTTAGATCACCTTCATGGGAACGCCGAAGGAGTTCACCAAGAGCACCGTCACGGAGATTGATCAGTAGAAGTCCAGTAAGAGTGTCAAGAAAGAGTTTAAGCAGGAGTCCAGTTCGATCATCTGCCAGAAGCTTGAGCAGAAGCTCTGGCAGAGTCCCTTTGAGAAGCAATAGTCGCAGTCCAGTTAGAGGGCCAAGCAGAGTCCCTTTGAGAAGCATTAGTCGCAGTCCAGTTAGAGGGCCAAGCAGAGTCAATCGCCGCAGTTATTCCAGGAGTCCTCGTGGTAGGAGCTTGTCTAGAAGTTTGTCACCTGATGTTTCCCCAAAACGTATCAGAAGGGGAAGAGGTTTTAGTGAACGATATTCTTATGCTAGAAGGTATAGGACTCCCTCTCGATCTCCTGTGAGATCATACCGCTATAATGGAAGAAGTGACCGTGACAGATATTCAGGTTACAGAAGGTACTCCCCTAGGCGTAACAGGAGCCCACCACCACGCAGAAGAACCCCACCAAGGTTCCGCAGTAGGAGGAGCAGGACACCATCCGTTTCTCGCAGCCCACGTTATAGAGGTCGACGATACAGTCGAAGCCGTAGCCCTGTACGCAGTCGTTCACCTGCTGGCGCGTATCGACGTCGTGTTGAGAGGAGCAGGTCCTTGTCCCGGAGTAGCAGGTCTCTGTCCCGGAGCAGGAGTCCATCACTATCCAGGGCTTCAGTGGAGTCACAATCTCCACGAAAGAACAGCAGGTCAAGGTCCCGGTCCCAAAGCTCGGATGGAAAGAAAGGCCTTGTATCGTACGGAGATGGTTCTCCAGATTCAAGCTGA 2850 0.4572 MYRRKGSWSKYWKITALQGFFLPSNCERLHCPGYRADGHDFLSCDIVLRVVILSIEMLSELQAMFHFHVCCDNGTGGESIYGSKFPDESPRLKHDAPGLLSMPVADRDTLGSHFIITFKADPHLDRKHVVFGKLVLGHDILKKIEDVGDKEGLPSVTVKIINCGEHNEDEKKINKSKKGRDGSSETNSHELHKGKHRKSSGDKRKRRKYYSSESDSSSDSDTKSSESDSDSDSDISSSSYTSSSSDDRRRKRKRSRKDKHRRGKKRDKHREKRRRKQDKRSKRRSRRELSSHTDSDSENKSNKCSDSESCGAEVNDQNHEDHSQRHAEGQSSSVVEKELPPMHPKKREKLDILKEEEFPKENGERCSNGTGANYRSERSEVRQPDVMDDQPDKSRSQSTSVSPRKRKSKSPSISPKGKLNRSPSGSRSPHAPLQRSLSQSPVRSTSRSPNRRSVSRSPMRGRKGRSISRSSVRRYGHQSVSTSPVRPLSRSYQRTSPKTSSRRSISRSPTISPGQRSVSVSPGRSPSRSQRRSSLKAPSRRSISRSPVRNRRLGSVSRSPSRSQGRRSDSGSPIRSLTPSHRISPRTKSRRSISRSPVRTRNHKSISKGTSRSRGHRTSSGSPVRSLSRSGRRSSPRAPSRRSISRSPVKTGNHRSVSRSPLRSHGQRSVSASPVRSPSWERRRSSPRAPSRRLISRSPVRVSRKSLSRSPVRSSARSLSRSSGRVPLRSNSRSPVRGPSRVPLRSISRSPVRGPSRVNRRSYSRSPRGRSLSRSLSPDVSPKRIRRGRGFSERYSYARRYRTPSRSPVRSYRYNGRSDRDRYSGYRRYSPRRNRSPPPRRRTPPRFRSRRSRTPSVSRSPRYRGRRYSRSRSPVRSRSPAGAYRRRVERSRSLSRSSRSLSRSRSPSLSRASVESQSPRKNSRSRSRSQSSDGKKGLVSYGDGSPDSS 949
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun8g00800 949 MobiDBLite consensus disorder prediction 882 896 - -
Viun8g00800 949 MobiDBLite consensus disorder prediction 393 455 - -
Viun8g00800 949 Gene3D - 54 167 IPR029000 -
Viun8g00800 949 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 113 125 IPR002130 GO:0000413|GO:0003755
Viun8g00800 949 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 126 141 IPR002130 GO:0000413|GO:0003755
Viun8g00800 949 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 98 113 IPR002130 GO:0000413|GO:0003755
Viun8g00800 949 MobiDBLite consensus disorder prediction 206 230 - -
Viun8g00800 949 MobiDBLite consensus disorder prediction 780 800 - -
Viun8g00800 949 MobiDBLite consensus disorder prediction 456 470 - -
Viun8g00800 949 MobiDBLite consensus disorder prediction 313 327 - -
Viun8g00800 949 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 31 165 IPR002130 GO:0000413|GO:0003755
Viun8g00800 949 MobiDBLite consensus disorder prediction 287 303 - -
Viun8g00800 949 MobiDBLite consensus disorder prediction 833 857 - -
Viun8g00800 949 MobiDBLite consensus disorder prediction 249 286 - -
Viun8g00800 949 MobiDBLite consensus disorder prediction 168 192 - -
Viun8g00800 949 MobiDBLite consensus disorder prediction 752 778 - -
Viun8g00800 949 MobiDBLite consensus disorder prediction 339 363 - -
Viun8g00800 949 MobiDBLite consensus disorder prediction 471 583 - -
Viun8g00800 949 MobiDBLite consensus disorder prediction 897 925 - -
Viun8g00800 949 MobiDBLite consensus disorder prediction 701 737 - -
Viun8g00800 949 MobiDBLite consensus disorder prediction 612 680 - -
Viun8g00800 949 MobiDBLite consensus disorder prediction 584 611 - -
Viun8g00800 949 MobiDBLite consensus disorder prediction 168 949 - -
Viun8g00800 949 SUPERFAMILY Cyclophilin-like 70 169 IPR029000 -
Viun8g00800 949 MobiDBLite consensus disorder prediction 813 828 - -
Viun8g00800 949 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 76 164 IPR002130 GO:0000413|GO:0003755
Viun8g00800 949 MobiDBLite consensus disorder prediction 378 392 - -
Viun8g00800 949 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 72 165 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun8g00800 Viun-Chr8 7101498 7108707 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun8g00800 74 161 U-box Gene Family AT5G67530 41.111 4.66e-10 61.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun8g00800 K09566 - gmx:100801588 429.483