Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun8g00799 ATGACGAAGAGGAAGAATTCCCTGGTGTTTATGGATGTGTCCATAGATGGAGATCCTGTTGAAAGGATGGTTTTTGAGCTCTTCTATGATGTTGCTCCGAAGACTGCTGAAAATTTCCGTGCATTATGTACAGGAGAAAGGGGAGTTGGTCCAAATACTGGAAAATCACTGCACTACAAGGGTTCTTTCTTCCATCGAATTGTGAAAGGCTCCATTGCCCGGGGTGGTGATTTTGTCAATCGAAATGGGACTGGTGGAGAAAGCATATATGGTTCCAAGTTCCCAGATGAATCACCTAGGCTAAAGCATGATGCTCCTGGCCTTCTTTCAATGCCAGTTGCTGATCGTGACACTCTTGGTTCTCATTTTATAATCACTTTTAAAGCTGATCCCCATCTTGATAGGAAACATGTAGTGTTTGGCAAGCTTGTACTAGGACATGATATATTGAAGAAAATTGAAGATGTGGGTGATAAAGAAGGACTTCCAAGCGTGACTGTTAAAATAATTAATTGTGGTGAACATAATGAGGATGAAAAGAAGATAAATAAATCAAAAAAGGGAAGAGATGGATCTTCTGAAACAAATAGTCATGAACTGCATAAGGGAAAGCATCGAAAATCTTCAGGTGACAAAAGGAAAAGGAGAAAGTACTACTCATCAGAATCTGATAGTTCCTCAGATTCAGACACAAAATCTTCCGAAAGTGATAGTGATTCTGACTCTGATATATCTTCATCATCGTACACAAGTTCCTCCAGCGATGATAGGCGGAGAAAGAGAAAGAGGTCTAGGAAAGATAAACATAGACGTGGAAAAAAAAGAGATAAACACAGAGAAAAGAGACGAAGGAAGCAAGATAAAAGATCAAAGCGTAGATCAAGGAGGGAATTGTCCAGTCATACTGATTCAGATAGTGAAAATAAGAGCAACAAATGCTCTGATAGTGAAAGTTGTGGTGCCGAAGTGAATGATCAGAATCATGAAGACCATTCTCAGAGACATGCTGAAGGTCAGTCTTCCTCAGTTGTCGAGAAAGAATTACCTCCAATGCACCCTAAAAAGAGGGAGAAACTGGATATATTGAAAGAGGAAGAATTCCCAAAGGAAAATGGAGAGCGGTGTAGCAATGGAACTGGAGCCAACTATAGATCTGAAAGAAGTGAAGTGAGGCAGCCTGATGTGATGGATGATCAACCAGACAAATCTAGGAGTCAAAGCACGAGTGTTAGTCCGAGGAAGCGCAAGAGCAAAAGCCCAAGCATTAGTCCAAAAGGGAAGTTGAACAGAAGTCCAAGTGGCAGTAGAAGTCCTCATGCTCCATTACAGAGGAGTTTGAGCCAGAGTCCTGTTAGAAGCACAAGCAGGAGTCCAAATAGAAGAAGCGTCAGTAGAAGCCCAATGAGAGGTAGGAAAGGTAGAAGTATCAGTAGAAGCTCTGTAAGACGTTATGGACATCAAAGTGTCAGCACAAGCCCTGTAAGACCCCTTTCTCGGAGCTACCAAAGGACTTCACCAAAAACATCATCACGAAGATCAATCAGCCGAAGCCCTACGATATCTCCTGGTCAAAGAAGTGTCAGTGTAAGCCCAGGAAGATCCCCTTCTCGGAGCCAAAGAAGGAGTTCACTCAAAGCACCATCACGGCGATCAATCAGCAGAAGCCCAGTAAGAAATCGCCGACTTGGAAGTGTCAGTAGAAGCCCTTCAAGATCTCAAGGTCGTAGAAGTGATAGTGGAAGCCCTATAAGATCCCTTACACCAAGTCATCGTATATCACCCAGAACAAAATCTAGAAGATCAATCAGCAGAAGCCCTGTGAGAACTCGCAACCATAAAAGTATCAGCAAAGGCACCTCAAGATCTCGTGGTCATAGAACTAGCAGTGGAAGCCCTGTAAGATCCCTTTCTCGAAGTGGCCGTAGGAGTTCACCAAGAGCACCTTCGCGAAGATCAATCAGTAGAAGCCCTGTGAAAACTGGCAATCATAGAAGTGTAAGTAGAAGCCCCTTGCGATCTCATGGTCAAAGAAGTGTGAGTGCTAGCCCTGTTAGATCACCTTCATGGGAACGCCGAAGGAGTTCACCAAGAGCACCGTCACGGAGATTGATCAGTAGAAGTCCAGTAAGAGTGTCAAGAAAGAGTTTAAGCAGGAGTCCAGTTCGATCATCTGCCAGAAGCTTGAGCAGAAGCTCTGGCAGAGTCCCTTTGAGAAGCAATAGTCGCAGTCCAGTTAGAGGGCCAAGCAGAGTCCCTTTGAGAAGCATTAGTCGCAGTCCAGTTAGAGGGCCAAGCAGAGTCAATCGCCGCAGTTATTCCAGGAGTCCTCGTGGTAGGAGCTTGTCTAGAAGTTTGTCACCTGATGTTTCCCCAAAACGTATCAGAAGGGGAAGAGGTTTTAGTGAACGATATTCTTATGCTAGAAGGTATAGGACTCCCTCTCGATCTCCTGTGAGATCATACCGCTATAATGGAAGAAGTGACCGTGACAGATATTCAGGTTACAGAAGGTACTCCCCTAGGCGTAACAGGAGCCCACCACCACGCAGAAGAACCCCACCAAGGTTCCGCAGTAGGAGGAGCAGGACACCATCCGTTTCTCGCAGCCCACGTTATAGAGGTCGACGATACAGTCGAAGCCGTAGCCCTGTACGCAGTCGTTCACCTGCTGGCGCGTATCGACGTCGTGTTGAGAGGAGCAGGTCCTTGTCCCGGAGTAGCAGGTCTCTGTCCCGGAGCAGGAGTCCATCACTATCCAGGGCTTCAGTGGAGTCACAATCTCCACGAAAGAACAGCAGGTCAAGGTCCCGGTCCCAAAGCTCGGATGGAAAGAAAGGCCTTGTATCGTACGGAGATGGTTCTCCAGATTCAAGCTGA 2877 0.4571 MTKRKNSLVFMDVSIDGDPVERMVFELFYDVAPKTAENFRALCTGERGVGPNTGKSLHYKGSFFHRIVKGSIARGGDFVNRNGTGGESIYGSKFPDESPRLKHDAPGLLSMPVADRDTLGSHFIITFKADPHLDRKHVVFGKLVLGHDILKKIEDVGDKEGLPSVTVKIINCGEHNEDEKKINKSKKGRDGSSETNSHELHKGKHRKSSGDKRKRRKYYSSESDSSSDSDTKSSESDSDSDSDISSSSYTSSSSDDRRRKRKRSRKDKHRRGKKRDKHREKRRRKQDKRSKRRSRRELSSHTDSDSENKSNKCSDSESCGAEVNDQNHEDHSQRHAEGQSSSVVEKELPPMHPKKREKLDILKEEEFPKENGERCSNGTGANYRSERSEVRQPDVMDDQPDKSRSQSTSVSPRKRKSKSPSISPKGKLNRSPSGSRSPHAPLQRSLSQSPVRSTSRSPNRRSVSRSPMRGRKGRSISRSSVRRYGHQSVSTSPVRPLSRSYQRTSPKTSSRRSISRSPTISPGQRSVSVSPGRSPSRSQRRSSLKAPSRRSISRSPVRNRRLGSVSRSPSRSQGRRSDSGSPIRSLTPSHRISPRTKSRRSISRSPVRTRNHKSISKGTSRSRGHRTSSGSPVRSLSRSGRRSSPRAPSRRSISRSPVKTGNHRSVSRSPLRSHGQRSVSASPVRSPSWERRRSSPRAPSRRLISRSPVRVSRKSLSRSPVRSSARSLSRSSGRVPLRSNSRSPVRGPSRVPLRSISRSPVRGPSRVNRRSYSRSPRGRSLSRSLSPDVSPKRIRRGRGFSERYSYARRYRTPSRSPVRSYRYNGRSDRDRYSGYRRYSPRRNRSPPPRRRTPPRFRSRRSRTPSVSRSPRYRGRRYSRSRSPVRSRSPAGAYRRRVERSRSLSRSSRSLSRSRSPSLSRASVESQSPRKNSRSRSRSQSSDGKKGLVSYGDGSPDSS 958
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun8g00799 958 MobiDBLite consensus disorder prediction 842 866 - -
Viun8g00799 958 MobiDBLite consensus disorder prediction 761 787 - -
Viun8g00799 958 MobiDBLite consensus disorder prediction 387 401 - -
Viun8g00799 958 MobiDBLite consensus disorder prediction 593 620 - -
Viun8g00799 958 MobiDBLite consensus disorder prediction 177 958 - -
Viun8g00799 958 MobiDBLite consensus disorder prediction 480 592 - -
Viun8g00799 958 Gene3D - 1 175 IPR029000 -
Viun8g00799 958 MobiDBLite consensus disorder prediction 710 746 - -
Viun8g00799 958 FunFam Peptidyl-prolyl cis-trans isomerase CYP95 1 182 - -
Viun8g00799 958 MobiDBLite consensus disorder prediction 465 479 - -
Viun8g00799 958 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 10 174 IPR002130 GO:0000413|GO:0003755
Viun8g00799 958 MobiDBLite consensus disorder prediction 906 934 - -
Viun8g00799 958 MobiDBLite consensus disorder prediction 822 837 - -
Viun8g00799 958 MobiDBLite consensus disorder prediction 215 239 - -
Viun8g00799 958 SUPERFAMILY Cyclophilin-like 4 178 IPR029000 -
Viun8g00799 958 MobiDBLite consensus disorder prediction 348 372 - -
Viun8g00799 958 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 122 134 IPR002130 GO:0000413|GO:0003755
Viun8g00799 958 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 27 42 IPR002130 GO:0000413|GO:0003755
Viun8g00799 958 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 107 122 IPR002130 GO:0000413|GO:0003755
Viun8g00799 958 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 135 150 IPR002130 GO:0000413|GO:0003755
Viun8g00799 958 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 64 76 IPR002130 GO:0000413|GO:0003755
Viun8g00799 958 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 9 174 - -
Viun8g00799 958 MobiDBLite consensus disorder prediction 402 464 - -
Viun8g00799 958 MobiDBLite consensus disorder prediction 296 312 - -
Viun8g00799 958 MobiDBLite consensus disorder prediction 258 295 - -
Viun8g00799 958 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 11 173 IPR002130 GO:0000413|GO:0003755
Viun8g00799 958 MobiDBLite consensus disorder prediction 177 201 - -
Viun8g00799 958 MobiDBLite consensus disorder prediction 789 809 - -
Viun8g00799 958 MobiDBLite consensus disorder prediction 322 336 - -
Viun8g00799 958 MobiDBLite consensus disorder prediction 891 905 - -
Viun8g00799 958 MobiDBLite consensus disorder prediction 621 689 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun8g00799 Viun-Chr8 7101498 7108728 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun8g00799 26 170 U-box Gene Family AT5G67530 39.456 3.53e-19 90.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun8g00799 K09566 - pvy:116115710 568.54