Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun8g00792 ATGGATTCAGAAATACTCTTTGTCTTTTCCTTTCTCCTCTGCATGATTGTGGCACTGAAATTAGGGAGAAACTTAAAGAAAAAAACTAAGTCATCACTGAACATACCCCCTGGACCATGGAAGCTGCCAATTATAGGAAACCTGCACCATCTTCTTTCATCCACACCACACCGAAAACTCAGAGACCTAGCCAAAATATATGGACCCATGATGCATCTCCAACTGGGAGAGATCTTCATAATCGTTGTTTCCTCCGCAGAGTATGCTAAAGAGATCATGAAAACACATGATGCAATCTTTGCATCAAGACCTCAACTTCTAGCAGCAGATATAGCCTCCTATGGATACACTAACATTGCTTTTGCGCCTTACGGAAGTTACTGGAAAAAGGTACGAAGAATCTGCACCATGGAGCTTCTGTCCCCAAAACGTGTGAGCTCATTCCAGCCTATCAGAGAGGAAGAACTGAGCAATCTGGTTGAAATTATTGGCACACATGTTGGAGGGTCCCCCATCAACCTCACTGAAGCAGTGTCGTCGTCAATGTATAACATAATTTCAAGAGCTGCTCTGGGGAAGAAGCGCACCAAAGACCAGGATGAGTTCATGTCAATACTCCAACGAGGAGTGGTTGGTGCAGGAGGCTTTGACATTGGAGAGTTGTTTCCTTCTGCTACATGGCTTCAACATCTCACTGGTTTGAGGCCTATGCTTGAGAAGGTGCATCAAGAAATGGATCGGATACTTGAAGCCATCATCGATGAACACAGAGAAGCGAGATCCAAAGCCAAATATGGCCATGAATCAGACGAAGATTTGGTTGATGTTCTGCTAAACTTCCATGATGCTAATGACACTAACCAAGAAGTTTGCTTAACCATTAACAATATCAAAGCAGTAATCATGGACATTTTTGTAGCTGGAGTTGAGTCTGTGACGACAACAGTAAACTGGGCAATGGCAGAGATGATAAAGAATCCAAGTGTGATGAAGAAAGCACAAGCTGAGGTGAGAGAAGTGTTCAAAGAAAAGGGAAAGGTTGATGAGATATGCATGAATGAACTACAATATCTGAAATCAGTTGTGAAAGAAACCCTAAGGTTACACCCTCCAGGAACTCTTCTGGTTCCAAGAGAATGTGGAGAGACATGTGAGATTGATGGGTATCACATACCAGTGAAGAGCAAGGTACTGATAAATGCTTGGGCAATTGGAAGAGACCCAAAGTACTGGAATGAAGCAGAGAGGTTTTATCCAGAGAGATTCATTGGAAGCTCCATTGATCTTAGAGGATCTCATTTTGAGTTCATTCCCTTTGGTGCTGGAAGAAGAATGTGTCCAGGCATGTCCTTTGGCTTGCTGAGTGTTGAACTCACTCTTGCTGTTTTGTTGTTTCACTTTGATTGGAACCTTCCAAATGGAATCAGAAGTGAAGACTTTGACATGTCTGAGAAATTTGGAGTCACTGTTGGAAGAAAGAATGACATTTTCTTGATACCTCTCACTGCTTCTACTTCCCTGGGAAGTGATGCAAAGAGTAACGAAGTAAGCAGTGGAAGCAAAGAAGAGTGA 1572 0.4268 MDSEILFVFSFLLCMIVALKLGRNLKKKTKSSLNIPPGPWKLPIIGNLHHLLSSTPHRKLRDLAKIYGPMMHLQLGEIFIIVVSSAEYAKEIMKTHDAIFASRPQLLAADIASYGYTNIAFAPYGSYWKKVRRICTMELLSPKRVSSFQPIREEELSNLVEIIGTHVGGSPINLTEAVSSSMYNIISRAALGKKRTKDQDEFMSILQRGVVGAGGFDIGELFPSATWLQHLTGLRPMLEKVHQEMDRILEAIIDEHREARSKAKYGHESDEDLVDVLLNFHDANDTNQEVCLTINNIKAVIMDIFVAGVESVTTTVNWAMAEMIKNPSVMKKAQAEVREVFKEKGKVDEICMNELQYLKSVVKETLRLHPPGTLLVPRECGETCEIDGYHIPVKSKVLINAWAIGRDPKYWNEAERFYPERFIGSSIDLRGSHFEFIPFGAGRRMCPGMSFGLLSVELTLAVLLFHFDWNLPNGIRSEDFDMSEKFGVTVGRKNDIFLIPLTASTSLGSDAKSNEVSSGSKEE 523
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun8g00792 523 CDD CYP71-like 67 495 - -
Viun8g00792 523 PRINTS E-class P450 group I signature 446 469 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun8g00792 523 PRINTS E-class P450 group I signature 181 199 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun8g00792 523 PRINTS E-class P450 group I signature 88 109 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun8g00792 523 PRINTS E-class P450 group I signature 359 377 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun8g00792 523 PRINTS E-class P450 group I signature 400 424 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun8g00792 523 PRINTS E-class P450 group I signature 64 83 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun8g00792 523 PRINTS E-class P450 group I signature 436 446 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun8g00792 523 PRINTS E-class P450 group I signature 296 313 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun8g00792 523 PRINTS E-class P450 group I signature 316 342 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun8g00792 523 FunFam Cytochrome P450 71D8 28 500 - -
Viun8g00792 523 SUPERFAMILY Cytochrome P450 36 499 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun8g00792 523 Gene3D Cytochrome P450 21 498 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun8g00792 523 Pfam Cytochrome P450 36 488 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun8g00792 523 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 439 448 IPR017972 GO:0005506|GO:0016705
Viun8g00792 523 PANTHER CYTOCHROME P450 71B11-RELATED 13 501 - -
Viun8g00792 523 PRINTS P450 superfamily signature 307 324 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun8g00792 523 PRINTS P450 superfamily signature 446 457 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun8g00792 523 PRINTS P450 superfamily signature 437 446 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun8g00792 523 PRINTS P450 superfamily signature 360 371 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun8g00792 Viun-Chr8 6986670 6992959 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun8g00792 6 500 Cytochrome P450 AT3G26300 40.600 7.73e-134 396
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun8g00792 - - gmx:100818508 732.25