Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun8g00776 ATGGGAAAACAGTGGTCTATCTTCTGTGTTATGCATACCCTTTTGTTGTGTGTCCTTCTTTCGTCTGAAGTAGTTTTGACTAGTATTCTCAAGGTTGGAAAAGCTTCTCCGGGGATTGAAGGTTCTCAGATGAATTGGATTGACAAGAACGGTATTTTGCTTGTTTCATACAATGGAGATTTTGGATTTGGCTTTGTCACCACTGCAAATGACATCACATTGTTTCTATTGGCAATAGTTCACATGGACAGCAACAAAGTGGTTTGGGTAGCAAATAGGGGTCTTCCTGTTTCCAACTCTGATAAATTTGTGTTTGATGAAAAGGGTAATCTCTATTTGCTTAAAGGATCAACAGTGGTGTGGTCTACAGGTACAGAAGGCAAGAATGTGTCTTCAATGGAATTGAAAGACACCGGAAACTTGGTTTTGCTAAGGAATGATAGTCATGTGATTTGGCAGAGTTTCAGCCACCCAGCAGATACCTTGTTGCCAATGCAGGAGTTCATTGAGGGAATGAAGCTTATCAGTGAACCTGGTCCTAACAATTTGACCTATGTTCTTCAGATTGAATCTGGCAATGCCATTCTCTCTACTGGTTTACAAACTCCACAGCCTTATTGGTCTCTGAAGGATGATAGCCGCAAAAAAATCATCTACAAGAGTGGTGGCGTGGTGGCTTCAGCTACCCTTAATGCAAGCTTCTGGAGTTTCTTTGATGAAACTAAGTCCTTGTTGTGGCAATTTGATATTGCTGAAAAATCAGATTCAAATGGTACTTGGATTCTAGTTTTGGGGAGTGACGGCCTCATCACATTCTCCAGTCTCCAAAGAGAAATTGTTGTTTCACCAATAACAATACCACAAGATTCTTGCAGCACCCCAGAACCTTGTGATCCCTATTACATATGCAGTGGTGGCAAAAAATGCACCTGCCCTTCTGTTCTTAGCTCTAGTCCTAATTGCAAACCCGGGTTTGTCTCTCCTTGCAGCTCAAAAGGAACCTTAGAGCTCCTCAAAGCTGATGATCCACTCAATTACTTTGCACTTGGGTTTGTTCCACCCTCTTCGAAGACTGATTTGATTGGTTGCAAAACCTCTTGCAGTGCAAATTGCTCATGCCTTGCTTTCTTCTTCAACAGCAGTTCAGGGAACTGTTTCCTATTGGACTGGATTGGAAGCTTTCAGAAATCTGTCGAAGATTCTGGTTTAGTGTCCTACATTAAGGTGGTATCTAGTGATGGAGACCATGGAGACAGTGAAAGCAGCACTTTGCAGGCAATAGTTGTTGTGATCATTGTGATAGCAACATTGTTTGTCATTTGTGGTATGCTGTTTGTGGCACATAGATGTTTCAGGAAAAAGCAAGATTTGCCTGAGTCTCCTGAAGAGTTTTCAGAAGATGAGAGTTTCTTGGAGGGTTTAACCGGCATGCCAATACGTTACAGCTACAATGATCTAAAAACTGCAACAAGTAACTTCTCAGTGAAGCTAGGAGAAGGGGGTTTCGGATCAGTTTATAAAGGAGTTGTACCAGATGGTACTCAACTAGCAGTGAAGAAGTTGGAAGGAATTGGGCAAGGGAAGAAAGAGTTCAAGGTTGAAGTTAGCATTATAGGGAGAATTCATCATCACCACTTAGTAAGGCTTAAAGGGTTCTGTGCTGAAGGGCCTCATAGACTTCTTGCTTATGAGTACATGGCCAATGGATCATTGGATAAATGGATATTCAACAAGCACAGAGAGGGGTTTGTGTTGGATTGGGATACAAGGTATAACATAGCACTTGGAACAGCAAAAGGACTTGCCTACCTCCATGAAGATTGTGACTCAAAGATTATCCATTGTGACATCAAACCAGAAAATGTGCTTCTAGATGATAACTTCTTGGTCAAGGTTTCTGATTTTGGTTTAGCTAAGCTCATGACACGGGAACAAAGCCATGTTTTCACAACACTTAGAGGCACAAGAGGGTATCTTGCACCTGAATGGATCACAAACTGTGCCATATCAGAGAAAAGTGACGTTTATAGCTATGGCATGGTGTTACTAGAGATCATTGGAGGGAGGAAAAACTATGATCCAAGGGAAACTTCAGAGAAATCCCATTTCCCATATTTTGCTTTTAAGATGATGGAAGAAGGGAAGGTGAGAGAAATTGTTGACTCAAAGGTGGAAACTGATGAAAATGATGAGAGGGTTGAAACTGCTGTGAAAGTTGCATTGTGGTGCATACAAGAAGACATGTCTTTGAGGCCTTGTATGAGCAAAGTTGTCCAAATGCTAGAGGGTTTATGCACTGTTTCTAAGCCACCAACTTGTTCTGTGCCTGGTTCTCAGTTTTACTCATATAGTGATGCTGGTACTTCTTCAGGACCATCAGATTGTAACAGTGATGCTAATCTTTCTGCTGTTAGGCTTTCAGGGCCAAGATGA 2433 0.4164 MGKQWSIFCVMHTLLLCVLLSSEVVLTSILKVGKASPGIEGSQMNWIDKNGILLVSYNGDFGFGFVTTANDITLFLLAIVHMDSNKVVWVANRGLPVSNSDKFVFDEKGNLYLLKGSTVVWSTGTEGKNVSSMELKDTGNLVLLRNDSHVIWQSFSHPADTLLPMQEFIEGMKLISEPGPNNLTYVLQIESGNAILSTGLQTPQPYWSLKDDSRKKIIYKSGGVVASATLNASFWSFFDETKSLLWQFDIAEKSDSNGTWILVLGSDGLITFSSLQREIVVSPITIPQDSCSTPEPCDPYYICSGGKKCTCPSVLSSSPNCKPGFVSPCSSKGTLELLKADDPLNYFALGFVPPSSKTDLIGCKTSCSANCSCLAFFFNSSSGNCFLLDWIGSFQKSVEDSGLVSYIKVVSSDGDHGDSESSTLQAIVVVIIVIATLFVICGMLFVAHRCFRKKQDLPESPEEFSEDESFLEGLTGMPIRYSYNDLKTATSNFSVKLGEGGFGSVYKGVVPDGTQLAVKKLEGIGQGKKEFKVEVSIIGRIHHHHLVRLKGFCAEGPHRLLAYEYMANGSLDKWIFNKHREGFVLDWDTRYNIALGTAKGLAYLHEDCDSKIIHCDIKPENVLLDDNFLVKVSDFGLAKLMTREQSHVFTTLRGTRGYLAPEWITNCAISEKSDVYSYGMVLLEIIGGRKNYDPRETSEKSHFPYFAFKMMEEGKVREIVDSKVETDENDERVETAVKVALWCIQEDMSLRPCMSKVVQMLEGLCTVSKPPTCSVPGSQFYSYSDAGTSSGPSDCNSDANLSAVRLSGPR 810
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun8g00776 810 ProSiteProfiles Protein kinase domain profile. 491 764 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun8g00776 810 CDD STKc_IRAK 497 764 - -
Viun8g00776 810 SMART blect_4 45 158 IPR001480 -
Viun8g00776 810 MobiDBLite consensus disorder prediction 785 810 - -
Viun8g00776 810 Gene3D Phosphorylase Kinase; domain 1 460 565 - -
Viun8g00776 810 PIRSF SRK 8 807 IPR024171 GO:0004674
Viun8g00776 810 ProSiteProfiles Bulb-type lectin domain profile. 38 156 IPR001480 -
Viun8g00776 810 SMART serkin_6 491 761 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun8g00776 810 Pfam D-mannose binding lectin 87 168 IPR001480 -
Viun8g00776 810 SUPERFAMILY alpha-D-mannose-specific plant lectins 85 209 IPR036426 -
Viun8g00776 810 CDD PAN_AP_plant 355 409 - -
Viun8g00776 810 SUPERFAMILY Protein kinase-like (PK-like) 474 762 IPR011009 -
Viun8g00776 810 FunFam S-receptor-like kinase 5 566 770 - -
Viun8g00776 810 FunFam Serine/threonine-protein kinase 41 156 - -
Viun8g00776 810 ProSitePatterns Serine/Threonine protein kinases active-site signature. 612 624 IPR008271 GO:0004672|GO:0006468
Viun8g00776 810 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 42 773 - -
Viun8g00776 810 CDD B_lectin 47 158 IPR001480 -
Viun8g00776 810 Gene3D - 46 157 IPR036426 -
Viun8g00776 810 Pfam Protein kinase domain 494 759 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun8g00776 810 ProSiteProfiles PAN/Apple domain profile. 329 411 IPR003609 -
Viun8g00776 810 MobiDBLite consensus disorder prediction 785 803 - -
Viun8g00776 810 FunFam serine/threonine-protein kinase PBS1-like 460 565 - -
Viun8g00776 810 ProSitePatterns Protein kinases ATP-binding region signature. 497 520 IPR017441 GO:0005524
Viun8g00776 810 Gene3D Transferase(Phosphotransferase) domain 1 566 771 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun8g00776 Viun-Chr8 6784039 6787374 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun8g00776 422 771 Receptor kinase-like Gene Family AT5G20050 43.590 3.38e-92 295
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Viun8g00776 Pkinase 1.4e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun8g00776 - - gmx:100787500 1355.12