Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun8g00767 ATGGGTTCAGGAATGTCTAAAGAAGTTATTGATGCTACTTCAGCTGCCCCTTTTGACTTTGAGATCTTGGATAGTGATTCTTACATTGTTAGATCTGTTAGAGCCTCATCCAATCGTGCAAATCCATGGATTGAACCTGAAAGGCTGAAACTTAGACACAGAATTGGTAGAGGCGTCTTTGGTGATGTTTGGTTAGCAACTCATCATCAGTCAACTGAAGATTATGATGAGTGTCATGAAGTTGCTGCTAAGATGTTACATGCAATTGGAGAGGACCACATGAAGACTGTAATAGAGAAGTTCAATGAATTGTATTTTAAGTGCCAAGGAGTTGCTAGCATGTCCTGGCTGCATGGAATTTCAATCTTAGATGGAAGGATTTGCATTATTATGAATTTGTACGCGGGTTCAATTGGTGACAATATTGCAGCACTCAAAGAAGGAGGGATTTCATTGCATGATGCTTTAAGGTATGGAGTCAATCTTGCTCAAGCTGTTCTGGAACTTCACTCTCTAGGGATCCTCATTCTTAATCTTAAACCATTCAATGTTGTTCTCAATGAGAACGATCAAGCAATTTTGGGAGATTTTGGAATTCCTAGTCTTTTGCTTGAGTCCTCATTCTTAAGCACATATATGGATAAGAGGCTTGGAACACCAAATTACATGGCTCCAGAGCAATGGGAACCTGAGGTGAGAGGTCCTATATCGTTTGAAACGGATTCTTGGGGATTTGGTTGTACCATTGTCGAAATGTTGACTGGTAATCAACCTTGGTATGGATGTCCTGTTTCCAGAATATACCAGTCAGTTGTTGAAAATCATGAAAAACCAAATATTCCCAGTGGCCTTCCTCCTTCAGTTGAGAATATCCTCAGTGGATGCTTTGAGTATGATTTGAGGAATCGCCCTTTAATGGTGGATATTCTGAGTGTCTTTCAAAGAGCTCTGAATGAATTGGCCAATGATGGAGAATGGAGATATATGGGAAATGTGAAAGTTAATCCAAAATCAGATAGCAGTGGCTACACAAAGTGGTTCCTCTCAAAGGATCATCTTCAGGTAGGTGACATGGTCCGAACCAGAAAGCTTCCCAATTCATGCAGACCTCAAAACATGGACATCCCAGAAGGAGCTGTTGTTAGTTTAGAGTCTAACACAGATCACAGGTTCGCTATTGTGAGGGTCCATGGCTATGACGACCCTATCAGAGTTCATGCATCATCGCTTGAACGTGTCACATCTGGTTTGGTAGCTGGTGATTGGGTATGTTTGAGGGAACAAAACGAGAAGCACTCACATGTGGGCATTCTACACGCCATCAACCGTGATAGTAGTGTATCTGTTGGATTTCTTGGGCTGCACGCTCTGTGGGACGGAAACTCTTCTGAACTAAAAAAGGTGGAACCTTTCTGTGTTGGCCAGTTTGTCAGACTCAAAGACAGCGTTTCATGTCCTCGATTTGAGTGGCGTCGCAAAAGGGGTGGCGCCTGGGCTGCCGGCAGGATCTCATGGATTCTTCCGAATGGAGGTTTGGTTGTGAAATTCCCAGGGATGCTTGATTTTGGCAATGAAGCAAACACCTACATGGCGGATCCCTCTGAGGTTGAAGTGGTTGAGTTCAGGACTTGTCCTGGGATCATAGAAAAGTATGAACATTTAGAGGATCATCACTGGGCAATTAGACCAGTTCTAGTTGCATTTGGTCTATTCACTGCTTTGAAATTTGGCATACTTGTTGGGAAGAAAGTGAGGAGGAACAACAAGGTCAATGCAGTAGAAATTGAAAGTCACTATCTTGGTGGTCAAAATCAGAATGCCAATTCTGCTACTACAACTTCTACTACCACCACAATGAGATCTTCAAATGCTGCGAAACAAGGCAATGCAGCATGGCTTCCTTTAGTTCCTAATGTAATGTTTAAGGAAGCTGGTAACTCATCCAACAGTAGGTAG 1956 0.4254 MGSGMSKEVIDATSAAPFDFEILDSDSYIVRSVRASSNRANPWIEPERLKLRHRIGRGVFGDVWLATHHQSTEDYDECHEVAAKMLHAIGEDHMKTVIEKFNELYFKCQGVASMSWLHGISILDGRICIIMNLYAGSIGDNIAALKEGGISLHDALRYGVNLAQAVLELHSLGILILNLKPFNVVLNENDQAILGDFGIPSLLLESSFLSTYMDKRLGTPNYMAPEQWEPEVRGPISFETDSWGFGCTIVEMLTGNQPWYGCPVSRIYQSVVENHEKPNIPSGLPPSVENILSGCFEYDLRNRPLMVDILSVFQRALNELANDGEWRYMGNVKVNPKSDSSGYTKWFLSKDHLQVGDMVRTRKLPNSCRPQNMDIPEGAVVSLESNTDHRFAIVRVHGYDDPIRVHASSLERVTSGLVAGDWVCLREQNEKHSHVGILHAINRDSSVSVGFLGLHALWDGNSSELKKVEPFCVGQFVRLKDSVSCPRFEWRRKRGGAWAAGRISWILPNGGLVVKFPGMLDFGNEANTYMADPSEVEVVEFRTCPGIIEKYEHLEDHHWAIRPVLVAFGLFTALKFGILVGKKVRRNNKVNAVEIESHYLGGQNQNANSATTTSTTTTMRSSNAAKQGNAAWLPLVPNVMFKEAGNSSNSR 651
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun8g00767 651 ProSitePatterns Protein kinases ATP-binding region signature. 55 84 IPR017441 GO:0005524
Viun8g00767 651 MobiDBLite consensus disorder prediction 604 623 - -
Viun8g00767 651 Gene3D Phosphorylase Kinase; domain 1 28 131 - -
Viun8g00767 651 Gene3D Transferase(Phosphotransferase) domain 1 136 344 - -
Viun8g00767 651 Pfam Protein tyrosine and serine/threonine kinase 49 311 IPR001245 GO:0004672|GO:0006468
Viun8g00767 651 SUPERFAMILY Protein kinase-like (PK-like) 46 312 IPR011009 -
Viun8g00767 651 ProSiteProfiles Protein kinase domain profile. 49 317 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun8g00767 651 PANTHER OS06G0639500 PROTEIN 5 646 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun8g00767 Viun-Chr8 6696880 6700987 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun8g00767 25 320 MAP Kinase Kinase Kinase AT2G17700 24.834 5.66e-19 89.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-1 Viun8g00767 PK_Tyr_Ser-Thr 7.9e-29 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun8g00767 - - gsj:114393396 1025.39
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun8g00767 8 6696880 6700987 Viun8g00767 8 6696880 6700987 ECH
Viun9g03097 9 38471585 38475685 Viun8g00767 8 6696880 6700987 ECH
Viun8g00767 8 6696880 6700987 Viun9g03097 9 38471585 38475685 PCT