Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun8g00764 ATGTTTGTCCTAGAAAATGGTGCGAAGAAGGGGGAAGACCCAAGGCTTCAAGCCATCTCCGAAGCCATCAGAGTGGTGCCTCACTTCCCCAAACAAGGAATAATGTTTCAAGACATAACAACATTGTTGTTGGATCACAACGCGTTCAAAGACGCGGTTGACATTTTTGTTGATCGTTACAGAGACATGGATATTTCTGTTGTTGCTGGGGTTGAAGCCAGGGGATTCATTTTTGGTTCCTCAATTGCGTTAGGCATTGGTGCCAAGTTTGTTCCTTTATGCAAACCTGGGAAGCTGCCAGGTGAAGTGATTTCAGAAAAATATGTTCTAGAATATGGCAGTGATTGTTTGGAGTTGCATGTTGGGGCTGTTCATTCCAGTGAACGTGTCATAATTGTTGATGATTTGGTGGCCACAGGTGGAACTCTATCAGCAGCAATTAGACTTCTAGAACTTGCTGGTGCTGAAGTAGTGGAGTGTGCTTGTGTGATTGGTCTATCTGATCTCAAGGTACGAAGCAAGCTTAATGGAAAGCCACTTTATATCCTTTTGGAGCCACGTGAAGTAGAAAATGGTTTTTGA 582 0.4347 MFVLENGAKKGEDPRLQAISEAIRVVPHFPKQGIMFQDITTLLLDHNAFKDAVDIFVDRYRDMDISVVAGVEARGFIFGSSIALGIGAKFVPLCKPGKLPGEVISEKYVLEYGSDCLELHVGAVHSSERVIIVDDLVATGGTLSAAIRLLELAGAEVVECACVIGLSDLKVRSKLNGKPLYILLEPREVENGF 193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun8g00764 193 CDD PRTases_typeI 52 185 IPR000836 -
Viun8g00764 193 NCBIfam adenine phosphoribosyltransferase 20 185 IPR005764 GO:0003999|GO:0005737|GO:0006168
Viun8g00764 193 PANTHER ADENINE PHOSPHORIBOSYLTRANSFERASE 9 186 - -
Viun8g00764 193 SUPERFAMILY PRTase-like 22 178 IPR029057 -
Viun8g00764 193 Hamap Adenine phosphoribosyltransferase [apt]. 19 186 IPR005764 GO:0003999|GO:0005737|GO:0006168
Viun8g00764 193 FunFam Adenine phosphoribosyltransferase 1 7 186 - -
Viun8g00764 193 Gene3D - 6 186 IPR029057 -
Viun8g00764 193 Pfam Phosphoribosyl transferase domain 44 164 IPR000836 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun8g00764 Viun-Chr8 6637693 6641041 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun8g00764 12 185 PRT Gene Family AT1G27450 66.667 2.19e-82 240
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun8g00764 K00759 - gmx:100775389 353.214
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun8g00764 8 6637693 6641041 Viun8g00764 8 6637693 6641041 ECH
Viun9g03099 9 38497234 38500855 Viun8g00764 8 6637693 6641041 ECH
Viun8g00764 8 6637693 6641041 Viun9g03099 9 38497234 38500855 PCT