Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun8g00747 ATGATGTGGAGAGAGACAACATTGTTGGTGGTACTGCTGCTTCTAATCCACAGAAGTCATGCTCGTTGTCTTCCTTCTTCCTGCGGCAACATCACCCACGTCTCTTATCCATTTCGATTACAAGCCGACCCAGAGAAGTGTGGTAACAAAAGGTATGAGCTTGTTTGTGAGAACAATGTTACGGTGTTGTATCTGCACTCTGCAAAATACCATGTTCAGGCAATCAACTACAACAACTACACAGTGAGAGTGGTTGACCCTGCAATTCAACACCACAATTGCTCCTCCCTTCCTCTGCGTTCTCTCTCTCGCTCCAATTTCTCTGATACTTACGATGACTACACGGATCCATACCAAGCCGGTCTAAGAGCATATGGTAATTGGAAAGCTCTGAGTTTCGAGCATATAGTGTTTCTGAACTGTAACCATTCATTGAGAGGGAATGGGAAGTATGTGGAAACTGAAAAGTGCGTGAAGTGGGAGTCAAAGGGATATGCATATGCTGTTGGTGGTGATCTAAAAGCAGAGGACTTTGAAGTTGGCTGTGACGTAAAGCTTGTTGCTCCAACGTCTTTGTGGACTTTCAATAACCATTCCTACGCTTCCATGCACAGGGGTCTGGCCTATGGATTTGAGATTTCATGGCCTACGTTTCGTATAGTGGATGTGCTGACACTGCAAGCATCAGGAGTTTTCGCACTTGTTATCGTTTTCGCACTTGTTATCGTGGTGTGGGCTTGCAAAATTGTGTTTGGGGTGCTACTGATTGTTGCACTTGTCATATGTAAATGGAAGAAAAGATGTGCATCAATGTTTGAAAATATTGAAAATTACCTTGAACAAAATAGTTTGGCACCTATTAGATACTCGTACAAGGAAATCAAGAAAATGACTGGAAGTTTCAAAGAAAAGTTAGGTGAAGGAGGATTTGGCTATGTGTTTAAGGCAAAGTTGTGTAGTGGACCTTTTGTAGCAATTAAAATGTTAGGCAGATCCAAAGGAAATGGACAAGATTTTATCAATGAAGTTGCAACAATTGGAAGAATACATCATCAAAATGTGGTACAATTAATTGGGTTTTGTGTTAGTGGCTCAAAGCGCGCTCTTGTGTATGAATTCATGTCAAATGGATCTCTTGATAAACTTATAGTTTCAAAAGAAGAAAGTGCACAATTAAGCTATGAAAAGATATACAATATATCAGTTGGAGTGGCTCGTGGGGTTGCTTATCTTCATCATGGGTGTGAGATGAAAATTTTACACTTTGATATCAAACCCCATAACATCTTATTAGATGAAAACTTTATTCCAAAGATTTCCGACTTTGGATTGGCAAAGTTATATCCAATAGAAAATAGCATTGTCACAATGACTACAGCAAGAGGAACCATTGGATATATGGCTCCAGAATTGTTTTACAAAAATATTGGAGGAATATCCCATAAGGCAGATGTTTATAGCTTTGGAATGCTTTTGATGGAAATGGCAAGCAAGAGGAAGAACCTAAATCCACATGTAGAGCGATCAAGTCAATTGTACTTTCCATTTTGGATCTATGATCATATTAGAGAAGAAGAAAATATAGATATACAAGATTTGACTGAAGAGGAAAAGAAAATAGCAAAGAAGATGATTATAGTTGCACTTTGGTGTATACAATTGAAACCAAATGATCGTCCCTCAATGAATTGTGTAGTAAAAATGCTAGAAGGAAATATTGAAGACTTGGAAATTCCACCAGAACCTACTTTATATCCTGATGAAACGAGTACATATGATCAAACAATAAATTCAGCATCCACGACACATTCTTTTATCTAA 1821 0.385 MMWRETTLLVVLLLLIHRSHARCLPSSCGNITHVSYPFRLQADPEKCGNKRYELVCENNVTVLYLHSAKYHVQAINYNNYTVRVVDPAIQHHNCSSLPLRSLSRSNFSDTYDDYTDPYQAGLRAYGNWKALSFEHIVFLNCNHSLRGNGKYVETEKCVKWESKGYAYAVGGDLKAEDFEVGCDVKLVAPTSLWTFNNHSYASMHRGLAYGFEISWPTFRIVDVLTLQASGVFALVIVFALVIVVWACKIVFGVLLIVALVICKWKKRCASMFENIENYLEQNSLAPIRYSYKEIKKMTGSFKEKLGEGGFGYVFKAKLCSGPFVAIKMLGRSKGNGQDFINEVATIGRIHHQNVVQLIGFCVSGSKRALVYEFMSNGSLDKLIVSKEESAQLSYEKIYNISVGVARGVAYLHHGCEMKILHFDIKPHNILLDENFIPKISDFGLAKLYPIENSIVTMTTARGTIGYMAPELFYKNIGGISHKADVYSFGMLLMEMASKRKNLNPHVERSSQLYFPFWIYDHIREEENIDIQDLTEEEKKIAKKMIIVALWCIQLKPNDRPSMNCVVKMLEGNIEDLEIPPEPTLYPDETSTYDQTINSASTTHSFI 606
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun8g00747 606 SUPERFAMILY Protein kinase-like (PK-like) 283 570 IPR011009 -
Viun8g00747 606 ProSiteProfiles Protein kinase domain profile. 299 584 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun8g00747 606 Gene3D Transferase(Phosphotransferase) domain 1 374 578 - -
Viun8g00747 606 FunFam serine/threonine-protein kinase PBS1-like 269 373 - -
Viun8g00747 606 Pfam Protein kinase domain 302 567 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun8g00747 606 Gene3D Phosphorylase Kinase; domain 1 273 373 - -
Viun8g00747 606 ProSitePatterns Serine/Threonine protein kinases active-site signature. 419 431 IPR008271 GO:0004672|GO:0006468
Viun8g00747 606 PANTHER RUST RESISTANCE KINASE LR10-RELATED 273 590 IPR045874 GO:0004672
Viun8g00747 606 Coils Coil 523 543 - -
Viun8g00747 606 SMART serkin_6 299 569 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun8g00747 606 Pfam Wall-associated receptor kinase galacturonan-binding 23 86 IPR025287 GO:0030247
Viun8g00747 606 FunFam PR5-like receptor kinase 374 580 - -
Viun8g00747 606 ProSitePatterns Protein kinases ATP-binding region signature. 305 327 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun8g00747 Viun-Chr8 6364452 6371606 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun8g00747 13 585 Receptor kinase-like Gene Family AT5G38260 35.354 4.74e-112 347
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Viun8g00747 Pkinase 6.8e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun8g00747 - - vun:114195573 890.567