Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun8g00745 ATGTTAAGTAAATCTAAAAGAAATGGACAAGATTTTATCAACGAAGTTGCAACCATTGGAAGGATACATCATCAACATGTGGTACAATTAATTGGATTTTGTGTTAGTGGTTCAAAGCGTGCTCTTGTTTATGAATTCATGCCTAATGGATCTCTTGATAAACTTATATTTTCAAGAACTGGAAGTATACATTTAACCTATGAAAAAATATATAATATATCAATTGGAGTGGCTCGTGGGATTGATTATCTCCATCATGGGTGTGAGATGCAGATTTTGCATTTTGATATCAAACCTCATAACATCTTACTCGATGAAAACTTTATCCCAAAAGTTTCTGACTTTGGATTGGCAAAGTTATATCCAATAGATAATAGCATTGTCACAATAACGACAGCAAGAGGAACCATTGGGTATATGGCTCCAGAATTGTTCTACAATAATATTGGAGGAATATCCCATAAAGCTGATGTTTATAGCTTTGGAATGTTGTTGATGGAAATGGCAAGCAAGAGGAAGAATCTAAATGTCCATGCAGAACACTCAAGTCAACTTTACTTTCCCCTTTGGATCTATAATCATATTAGAGAAGAGGAAAATATAGATATAAAAGATTTGACTGATGAGGAAAAGATAATAGCAAAAAAACTTATCATAGTTGCACTTTGGTGTATACAATTAAGACCAAACGATCGTCCTTCAATGAATAGAGTAGTGGAAATGCTTGAAGGAGGCATTGAGGACTTGGAAATACCTCCAAAACCTACTTTATTTCCTGATGAAATGAGTGTAAAGGATGAAACAACCAACTCTATCTAA 819 0.3382 MLSKSKRNGQDFINEVATIGRIHHQHVVQLIGFCVSGSKRALVYEFMPNGSLDKLIFSRTGSIHLTYEKIYNISIGVARGIDYLHHGCEMQILHFDIKPHNILLDENFIPKVSDFGLAKLYPIDNSIVTITTARGTIGYMAPELFYNNIGGISHKADVYSFGMLLMEMASKRKNLNVHAEHSSQLYFPLWIYNHIREEENIDIKDLTDEEKIIAKKLIIVALWCIQLRPNDRPSMNRVVEMLEGGIEDLEIPPKPTLFPDEMSVKDETTNSI 272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun8g00745 272 FunFam PR5-like receptor kinase 47 254 - -
Viun8g00745 272 PANTHER RUST RESISTANCE KINASE LR10-RELATED 6 263 IPR045874 GO:0004672
Viun8g00745 272 Gene3D Phosphorylase Kinase; domain 1 1 50 - -
Viun8g00745 272 PIRSF ILK 2 250 - -
Viun8g00745 272 Pfam Protein kinase domain 6 240 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun8g00745 272 Gene3D Transferase(Phosphotransferase) domain 1 51 250 - -
Viun8g00745 272 SMART serkin_6 1 242 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun8g00745 272 ProSitePatterns Serine/Threonine protein kinases active-site signature. 92 104 IPR008271 GO:0004672|GO:0006468
Viun8g00745 272 ProSiteProfiles Protein kinase domain profile. 1 257 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun8g00745 272 SUPERFAMILY Protein kinase-like (PK-like) 6 242 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun8g00745 Viun-Chr8 6331792 6332812 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun8g00745 1 271 Receptor kinase-like Gene Family AT5G38280 49.455 1.72e-95 293
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Viun8g00745 Pkinase 2.9e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun8g00745 - - vum:124829708 478.018