Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun8g00738 ATGAGAAACAGTTTGGACATGATGCTGTGGAGAGAGACAACATTGTTGGTGGTACTACTGCTACTTCTACTCCACACAAGTCATGCTCGTTGTCTTCCTTCTTCGTGTGGCAAAATCAGCAACATCACTTATCCATTTCGATTAAAAGGCGACCCAGAAAAGTGTGGTGAGGAAAGGTATGAGGTTGGTTGTGAGAATAATGTTACGGTGTTGTATCTGCACTCTGCAAAATACCATGTTCAGGCAATCAACTACAACAAGTACACAGTGAGAGTGGTTGATCCTGCTCTTCAACTCCATAACTGCTCCTCTCTTCCTCTCCGCTCCCTCTCTCGCTCCAATTTCTCTGACACTTACACGCACCGCATGGGTCCATACCAAGCCGGTCTAGATTCATATGAAAATTGGGAATCGCTGAGTTTCAAGCATATAGTGTTTGTGAATTGTAAGCATTCAGTGAGAGAGAATGTAAAGTATGTGAAAACAGAAGAGTGCGTGAAGTGGGACTCAAAGGGCTATGCATATGCTTTTGTTGGTGACCTGAAAGCAGAGGACATTGAAGTTGGGTGTGACATAAAGCTTGTTGCTCCAACATCTTTGAGGACTTTCAATAACCATTCCTACACTTCCATGCACAGCAGCTTGGCCTATGGATTTGAGATTTCTTGGGTAAAACTCGCCTGCCAGAATTGTCTACTCTCATCAACCTATTGCTATTTCGACTCTTCTATACAGAAGCTTCAATATTGCAACTTCGGTATACTGGAAGAGCTGATACAGAAATCAGCAGGTACCCCATTTGTCTTGATGGCATGGAGTTGTAGAGGTTTGCTTGGAATACCACCATTGATTGTTGTGGTTTTGATATGCAAATGGCGGAAAAGATATGCATCAATGTATCAAAATATTGAAAACTATCTTAAGAAAAATAATATGGCACCTATTAGATACTCATACAAGCAAATTAAGAAGATGGCTGGAGGGTTTAAAGAGAAATTAGGGGAAGGAGGATTTGGTTCGGTATTTAAGGCAAAGTTGTCCAATGGACCTTGTGTGGCAATCAAAATGTTAGACAAATCCAAAGGAAATGGACAAGATTTTATCAGTGAAATTGCAACCATCGGAAGAATACATCATCAAAATGTGGTAAAGTTAATTGGATTTTGTGTTCATGGCTCAAAGCGTTATATTGTGTATGAATTCATGTCCAATGGATCTCTCGATAAATTTATTTTTTCAAAAGATGAGAGGGTTCATTTAAGTTATGAAAAAATATATAATATATCAATTGAAGTGGGTCGTGGGATTGCTTATCTCCACCATGGGTGTGAGATGAAGATTTTGCATTTTGATATAAAACCCCACAACATCCTCCTAGATGAAAACTTTCTACCGAAGATCTCTGACTTTGGGTTGGCAAAGCTATATTCAATAGATAATAGCATTGTCACAATGACTGCAGCAAGAGGAACCATTGGATATATGGCTCCAGAATTATTTTATAATAACATTGGAGGAATATCCAATAAGGTTGATGTGTATAGTTTTGGAATGCTTTTGATGGAGATGGCAAGCAAGAGAAAGAATTTAAACCCCCTTGTAGAACACTCAAGTCAGCTTTACTTTCCACTTTGGATTTATAATCACATTAGAGAAGAGGAAATTATTGAAATGGAAGATATGACAGAGGATGAAAGGAAAATAATAAAGAAGATGATCATAGTGGCACTGTGGTGTATACAATTGAAACCAAATGATCGTCCCTCAATGGATAGAGTAGTAGAAATGCTTGAAGGAGATGTTGAAGACTTGGAAATGCCTCCAAAACCTATTCTCTACCCAGATGAAACGGTGATAGAGGATCAAACAATCAACTCTAAATAG 1884 0.3875 MRNSLDMMLWRETTLLVVLLLLLLHTSHARCLPSSCGKISNITYPFRLKGDPEKCGEERYEVGCENNVTVLYLHSAKYHVQAINYNKYTVRVVDPALQLHNCSSLPLRSLSRSNFSDTYTHRMGPYQAGLDSYENWESLSFKHIVFVNCKHSVRENVKYVKTEECVKWDSKGYAYAFVGDLKAEDIEVGCDIKLVAPTSLRTFNNHSYTSMHSSLAYGFEISWVKLACQNCLLSSTYCYFDSSIQKLQYCNFGILEELIQKSAGTPFVLMAWSCRGLLGIPPLIVVVLICKWRKRYASMYQNIENYLKKNNMAPIRYSYKQIKKMAGGFKEKLGEGGFGSVFKAKLSNGPCVAIKMLDKSKGNGQDFISEIATIGRIHHQNVVKLIGFCVHGSKRYIVYEFMSNGSLDKFIFSKDERVHLSYEKIYNISIEVGRGIAYLHHGCEMKILHFDIKPHNILLDENFLPKISDFGLAKLYSIDNSIVTMTAARGTIGYMAPELFYNNIGGISNKVDVYSFGMLLMEMASKRKNLNPLVEHSSQLYFPLWIYNHIREEEIIEMEDMTEDERKIIKKMIIVALWCIQLKPNDRPSMDRVVEMLEGDVEDLEMPPKPILYPDETVIEDQTINSK 627
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun8g00738 627 PANTHER RUST RESISTANCE KINASE LR10-RELATED 300 616 IPR045874 GO:0004672
Viun8g00738 627 ProSitePatterns Protein kinases ATP-binding region signature. 333 355 IPR017441 GO:0005524
Viun8g00738 627 Gene3D Phosphorylase Kinase; domain 1 290 401 - -
Viun8g00738 627 Pfam Wall-associated receptor kinase galacturonan-binding 31 94 IPR025287 GO:0030247
Viun8g00738 627 ProSiteProfiles Protein kinase domain profile. 327 612 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun8g00738 627 FunFam serine/threonine-protein kinase PBS1-like 295 401 - -
Viun8g00738 627 ProSitePatterns Serine/Threonine protein kinases active-site signature. 447 459 IPR008271 GO:0004672|GO:0006468
Viun8g00738 627 Pfam Protein kinase domain 330 595 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun8g00738 627 Gene3D Transferase(Phosphotransferase) domain 1 402 606 - -
Viun8g00738 627 FunFam PR5-like receptor kinase 402 609 - -
Viun8g00738 627 SMART serkin_6 327 597 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun8g00738 627 SUPERFAMILY Protein kinase-like (PK-like) 312 598 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun8g00738 Viun-Chr8 6248977 6256225 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun8g00738 21 613 Receptor kinase-like Gene Family AT5G38260 35.333 8.49e-112 347
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Viun8g00738 Pkinase 7.9e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun8g00738 - - vun:114195573 911.753