Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun8g00735 ATGGAACTCGGCTTTAGGTACCAACTTGGACTTGTTTGTGTCATATTGCTCTTCCCTGCACTGTGTAACTGCAAGGAATATTTCACCAACTCAAGAGCAACCTATTATGGCAGCCCCGACGGTTACGGTACTCCAACTGGAGCTTGTGGCTTCGGGGAGTATGGAAGGAAGATGAATTGGTATGATGGAAGAGTCGCAGGGATCTCTGGGCTATGGAGGAACGGAGCTGGTTGTGGCACGTGTTATCAGGTAAAGTGCAAAATACCAGAACTGTGCGATGCGAATGGAGCATTCCTTGTGGCAACAGACAAGGGTTATGGAGACAGAACGGACTTCGTCATGAGCCCACAGGCGTTCTCAAGATTGGGACGCAATCAAAATGCATCTGCAGAGCTTAAGAAACACGGTACAGTGGAGATTGAATACAGAAGGGTTCCATGTACGTTCATGGGCAACGTCTTGTTTCACATCAAGGAAAGTAGCAGCAACCCTGGTTACTTGGCTGTTGTGATTCTGAATATAAATGGAAAATACGACGTCACTGCTGTTGAAATGTGGCAGAAAGGGCAACAACGATGGGAACCACTGCGCAGGGTGTATGGGGCAGTGTTTGACTTTGCTAATCCAGCGAGAGGTGCAATCCTGCTGAGGTTTCAAGTGGGCGTTAATTGGATGATACCAAAAGTTCCTATTCCTGCTAATTGGAAGCCTGGAGCAACTTACGACACCAAAGTTCAGTTTTACTAG 747 0.4726 MELGFRYQLGLVCVILLFPALCNCKEYFTNSRATYYGSPDGYGTPTGACGFGEYGRKMNWYDGRVAGISGLWRNGAGCGTCYQVKCKIPELCDANGAFLVATDKGYGDRTDFVMSPQAFSRLGRNQNASAELKKHGTVEIEYRRVPCTFMGNVLFHIKESSSNPGYLAVVILNINGKYDVTAVEMWQKGQQRWEPLRRVYGAVFDFANPARGAILLRFQVGVNWMIPKVPIPANWKPGATYDTKVQFY 248
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun8g00735 248 SUPERFAMILY PHL pollen allergen 152 242 IPR036749 -
Viun8g00735 248 ProSiteProfiles Expansin, Cellulose-binding-like domain profile. 165 243 IPR007117 -
Viun8g00735 248 Gene3D - 20 148 IPR036908 -
Viun8g00735 248 Gene3D - 150 248 IPR036749 -
Viun8g00735 248 PRINTS Expansin/Lol pI family signature 68 86 IPR007118 GO:0005576
Viun8g00735 248 PRINTS Expansin/Lol pI family signature 45 63 IPR007118 GO:0005576
Viun8g00735 248 PRINTS Expansin/Lol pI family signature 27 42 IPR007118 GO:0005576
Viun8g00735 248 PRINTS Expansin/Lol pI family signature 135 151 IPR007118 GO:0005576
Viun8g00735 248 PRINTS Expansin/Lol pI family signature 229 243 IPR007118 GO:0005576
Viun8g00735 248 PANTHER EXPANSIN-B3 18 247 - -
Viun8g00735 248 Pfam Expansin C-terminal domain 154 226 IPR007117 -
Viun8g00735 248 SUPERFAMILY Barwin-like endoglucanases 14 152 IPR036908 -
Viun8g00735 248 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 46 152 IPR007112 -
Viun8g00735 248 Pfam Lytic transglycolase 65 142 IPR009009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun8g00735 Viun-Chr8 6190531 6191858 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun8g00735 9 245 Expansin Gene Family AT4G17030 48.971 1.42e-79 238
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun8g00735 - - gmx:100778424 431.024