Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun8g00732 ATGTGGCGAGTGGTAGCAGTGTTGCTCTTACTTCTAGTCCAGACTAGTCACGCTGGTTGTCTTCCTTCTTCGTGTGGAAAAATCAGCTACATCAGCTATCCATTTCGATTAAAAGGCGACCCAGAAAAGTGTGGGGACGAAAGGTATGAGCTTGGTTGTGAGAATAATGTTACGCTGTTGTATCTGTACTCTGCAAAATATCATGTGGAGGCAATAAACTACAAGAACTACACAGTGAGAGTGGTTGATCCTGCACTTCAACTTCATAACTGCTCCTCTCTTCCTCTCCGCTCCATCTCTCGCTCCAATTTCTCTCATACTTACTCTAAATCTTACACTTACACTTACTCGTCGGATCCATACCAAGCCGGTCTAAGAGCACATAGTAAATGGGAATCTCTGAGTTTCGAGCATATAGTGTTTCTGAGTTGTAACCATTCGGTGAGAGAGAATGGGAAGTATGTGGGGAGTGGTGAGTGCGTGAAGTGGGACTCAAAAGGCTATGCATATGCTGTTGTTGGTGACCTAAAAGCAGAGGACTTGGAAGTTGGGTGTGACGTAAAGCTTGTTGCTCCAACATCTTTGTGGAGTTTCAATAATCATTCCTACGCTTCCATGCACAGGGCATTGGCTTATGGATTTGAGATTTCATGCCAGAATCTTGCTTGCAATACAGATCGAGAAGTCAGTGGAATACTTGGTGTGCTGGAATCCTATGTATCGAACCTGGACGAGTTTGTAAGAGATGTTGTCTTGCTCGCCTCTGCTTACAAACTTTTGTTTGGACTACCATTCTTAATTGTGATTTTGATATGTAAATGGAGGAAAAGACATGCATCAATGTATGAAAATATTGAAAATTACCTTCAACAAAATAATATGGCACCTATTAGATACTCATATAAGGAAATCAAGAAGATAGCAGGAGGTTTCAAAGAAAAGTTAGGTCAAGGAGGATTTGGTTCCGTCTTTAAGGCAAAGTTATTTAGTGGACCTTTTGTGGCAATCAAAATGTTAGGTAAATCAAAAGGAAATGGACAAGATTTTATCAACGAAGTTGCAACTATTGGAAGAATACATCATCAAAATGTGGTAAGATTAATTGGATTTTGTGTTCATGGCTCAAAACGTGCTCTTGTATATGAATTCATGCCAAATGGATCTCTTGATAAATTTATTTTTTCAAAAGATAGTGCACCTTTAAGCTGTGAAAAAATGTATAATATATCAATTGGAGTGGCTCGCGGGATTGCTTATCTCCACCATGGATGTGAGATGCAAATTTTGCATTTTGACATCAAACCCCATAACATCTTACTAGATGAAAACTTCATCCCAAAGGTTTCAGACTTTGGATTGGCAAAGTTATATCCAATAGATAATAGCATTGTCACAATGACTGCAGCAAGAGGAACCATTGGATATATGGCTCCAGAATTGTTTTATAATAATATTGGAGGAATATCCCATAAGGCTGATGTTTATAGCTTTGGAATGCTTTTGATGGAGATTACTAGTAAGAGGAAGAATCTAAATCCCCATGCAGACCGCTCAAGTCAACTTTACTTTCCCCTTTGGATCTACGATCACATTAGGGAAGAGGAAGATGTAGATATTGAAGATGTGACAGAAGAGGAAAAGAAAATAGCAAAGAAGATGATTATAGTGGCTCTATGGTGTATACAATTGAAACCAAATGATCGTCCGTCAATGAATAAAGTAGTAGAAATGCTTGAAGGAGACATTAAAGACTTAAAAATATCTCCAAAGCCTGCTTTATTTCCGGACGAAATGATTGTAGAGGATCAAACAATCAACTCTATCCAAACAATTCGAGTAAATTCATTTAGTAGTGATTAA 1860 0.3844 MWRVVAVLLLLLVQTSHAGCLPSSCGKISYISYPFRLKGDPEKCGDERYELGCENNVTLLYLYSAKYHVEAINYKNYTVRVVDPALQLHNCSSLPLRSISRSNFSHTYSKSYTYTYSSDPYQAGLRAHSKWESLSFEHIVFLSCNHSVRENGKYVGSGECVKWDSKGYAYAVVGDLKAEDLEVGCDVKLVAPTSLWSFNNHSYASMHRALAYGFEISCQNLACNTDREVSGILGVLESYVSNLDEFVRDVVLLASAYKLLFGLPFLIVILICKWRKRHASMYENIENYLQQNNMAPIRYSYKEIKKIAGGFKEKLGQGGFGSVFKAKLFSGPFVAIKMLGKSKGNGQDFINEVATIGRIHHQNVVRLIGFCVHGSKRALVYEFMPNGSLDKFIFSKDSAPLSCEKMYNISIGVARGIAYLHHGCEMQILHFDIKPHNILLDENFIPKVSDFGLAKLYPIDNSIVTMTAARGTIGYMAPELFYNNIGGISHKADVYSFGMLLMEITSKRKNLNPHADRSSQLYFPLWIYDHIREEEDVDIEDVTEEEKKIAKKMIIVALWCIQLKPNDRPSMNKVVEMLEGDIKDLKISPKPALFPDEMIVEDQTINSIQTIRVNSFSSD 619
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun8g00732 619 Gene3D Transferase(Phosphotransferase) domain 1 384 589 - -
Viun8g00732 619 FunFam serine/threonine-protein kinase PBS1-like 277 383 - -
Viun8g00732 619 ProSiteProfiles Protein kinase domain profile. 309 593 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun8g00732 619 ProSitePatterns Serine/Threonine protein kinases active-site signature. 428 440 IPR008271 GO:0004672|GO:0006468
Viun8g00732 619 Pfam Protein tyrosine and serine/threonine kinase 311 578 IPR001245 GO:0004672|GO:0006468
Viun8g00732 619 Pfam Wall-associated receptor kinase galacturonan-binding 20 83 IPR025287 GO:0030247
Viun8g00732 619 SMART serkin_6 309 578 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun8g00732 619 SUPERFAMILY Protein kinase-like (PK-like) 293 579 IPR011009 -
Viun8g00732 619 ProSitePatterns Protein kinases ATP-binding region signature. 315 337 IPR017441 GO:0005524
Viun8g00732 619 PANTHER RUST RESISTANCE KINASE LR10-RELATED 282 599 IPR045874 GO:0004672
Viun8g00732 619 FunFam PR5-like receptor kinase 384 589 - -
Viun8g00732 619 Gene3D Phosphorylase Kinase; domain 1 282 383 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun8g00732 Viun-Chr8 6042626 6057977 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun8g00732 10 593 Receptor kinase-like Gene Family AT5G38260 36.500 7.32e-112 347
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Viun8g00732 PK_Tyr_Ser-Thr 5.6e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun8g00732 - - vun:114195573 925.235