Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun8g00699 ATGGCTGCAACTCAGGCTAATGATCCTAGAACTGCAGTTTCTATTTCAAGGGTTGTGTCTGTGAATCCCAAACTTGTGCAACCTCACAGGGTTTTGACTCTTTCAAATTTGGACAGGCAGTGTCCACACCTCATGCACTTGGTCTTCTTCTACAATAACTTGCCTCATCAGAGGTTGAAGGATTTGTCCCTCAATTCAGTGTTCTGCAGCTTGAAATCTGGCTTGGAAGATACCTTGGCTCTGTGGTATCCTGCTGCAGGTAGGCTTTGGCCCAATCCAAGTGATGGCAAGCTCAACCTGTGGTGCAACAACCATGGTGCAGTTCTTGCAGAGGCTGAAACCTCTGCTAAAATTTCACAACTTGGAAACCTCTCTGAGTACAATGAATTCTTTGAGAAGCTGGTTTATAAGCCAGCTTTTGATGGGAACTTCTCAAACATGCCGCTGATTGTTGCTCAGGTCACTAAATTTGGTTGTGGAGGGTATTCAATTGGTATTGGAACAAGCCACTCTTTGTTTGATGGGCCAGCAACCTATGATTTCTTGCGTGCATGGGCTTCAAATTCAGAAATTGTGAAAGGAAGAAGCAGATCTGATGAGGTTCCAACAAAACCAGTGCATGAGAGAGGGATACTTCTGAGTGGTACTCTTCAAGCACCAAGAGACACTGCAAATTTTCCTTCAGACTCAACTTCAAATGCTAAGGAAGCAAGAGCCATGGCAATAGAACACTTATATCATCTTATAATGCAAACAGCTACTGCACAAAAGGGTTTTCCTCTGCAAATTGGAACACCCTCGAATTCAAAGAAGTGTGTTCTTAAAACCTATCATGTTTCAGGTGCAATGGCAGAAAACTTGAAAAGGAAACACTTCCCCATGAAAAGAGGTTCATTTCCTTTCTCAACCTTTGAGGTTCTTGCAGCACACCTTTGGAAGGCAAGGAGCAAAGCTTTAGGGGTGAAAAAGGAAAAACAAGTATGCCTCCAATTTGCAGTGGAGATAAGGAACAAGATGAGACCAGCATTGCCAAAATGTTTCAGTGGAAATGCATATGTTCTTGCCTCCATCATGATGGCAATGGGAGAATTAGAAGATGCAAGCCATGAATGCATCATCGAGAAAATAAGAGAGGCGAAGAACAAGGTGAACCAGGAATATGTGAGAAGCTATGTTGAAGCACTAGAAGGACCACAACAAGGTTCTTCTCTTCCTCCATTAAAGGAGCTAACTCTGGTTTCTGATTGGACAAGAATGCCTTTTCACAACATTGACTTCTTCCATGGAAAAGCAACCTATGCATGTCCTCTTGCCACTCCTCTCCCACAGGTCGCATACTTCATGCAAAGCCCTACTGACAACTTCGGCGTTGACATCAGAATTGGCTTGGAACCTGAAAATATAACTGCTTTTAGTCACTGCTTTTTAAGCATGGCGTGA 1440 0.4326 MAATQANDPRTAVSISRVVSVNPKLVQPHRVLTLSNLDRQCPHLMHLVFFYNNLPHQRLKDLSLNSVFCSLKSGLEDTLALWYPAAGRLWPNPSDGKLNLWCNNHGAVLAEAETSAKISQLGNLSEYNEFFEKLVYKPAFDGNFSNMPLIVAQVTKFGCGGYSIGIGTSHSLFDGPATYDFLRAWASNSEIVKGRSRSDEVPTKPVHERGILLSGTLQAPRDTANFPSDSTSNAKEARAMAIEHLYHLIMQTATAQKGFPLQIGTPSNSKKCVLKTYHVSGAMAENLKRKHFPMKRGSFPFSTFEVLAAHLWKARSKALGVKKEKQVCLQFAVEIRNKMRPALPKCFSGNAYVLASIMMAMGELEDASHECIIEKIREAKNKVNQEYVRSYVEALEGPQQGSSLPPLKELTLVSDWTRMPFHNIDFFHGKATYACPLATPLPQVAYFMQSPTDNFGVDIRIGLEPENITAFSHCFLSMA 479
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun8g00699 479 Gene3D - 9 228 IPR023213 -
Viun8g00699 479 Gene3D - 253 477 IPR023213 -
Viun8g00699 479 Pfam Transferase family 15 474 - -
Viun8g00699 479 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 21 433 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun8g00699 Viun-Chr8 5644930 5650527 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun8g00699 13 471 Monolignol Biosynthesis Gene Families AT5G48930 24.416 9.74e-35 133
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun8g00699 K15400 - gmx:100779295 801.201