Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun8g00671 ATGAGTACTAAAAGGAACACATGGAAGTCTGTGATCTTGATCTTAGGTTGCTACAAGGTTAAGTGCCCCCTGGAGGAATCAGAAAAACAGGTTTTGAAACAAGGGTCTTTCCAGAGGCTGTGTCTATCTGATGTGAGCAATTCAAGCTCCACTCAGGCCATTGAGGATCTTTCAATTTCCTTTGCTGGCTCCAAACTCTATGCATTCACACTTGAGGAGCTAAGAGAAGCAACAAACAGTTTCTCATGGAGTAACATGCTAGGAGAAGGAGGGTTTGGACCTGTGTACAAGGGTTTTGTGGATGACAAACTTAGGCCAGGTTTGAAGGCTCAGACTGTTGCAGTGAAAAGGTTGGATTTGGATGGCTTGCAGGGTCACAGGGAGTGGCTGGCAGAGATTATATTTCTTGGACAGCTGAGGCATCCACATCTTGTCAAGTTAATTGGTTACTGTTATGAGGATGAACACAGGCTGTTGATGTATGAATACATGCCAAGAGGAAGCTTGGAGAATCAACTCTTCAGAAAATACTCTGCTGCTATGCCATGGTCAACCAGAATGAAAATTGCTTTAGGAGCTGCCAAAGGTCTAGTCTTCCTTCATGAATCAGATAAGCCTGATTTCACAGCTAAACTCTCAGACTTTGGTCTAGCCAAGGATGGCCCTGAAGGGGAAGACACATATGTAACAACACGCATAATGGGAACACAAGGATATGCTGCTCCTGAATACATAATGACAGGTCACCTTACAACTAAGAGTGATGTGTATAGCTATGGAGTGGTGCTGTTGGAATTGCTTACAGGAAGACGAGTAGTGGATAAGTCTCGGTCAAATGGTGGGAAGAGCTTAGTGGAATGGGCAAGGCCTTTGCTGAGAGATCAGAAAAAACTTTATAGCATCATCGATTGTAGACTAGAAGGTCAATTTCCCATGAAAGGAGCCATGAAAGTTGCTATGTTGGCTTTCAAATGCTTGAGTCCTCACCCAAATGCAAGACCAACTATGAGTGATGTGGTGAAGGTGTTGGAGCCACTTCAGGACTTTGATGATGTTTTCATTGGACCCTTTGTGTATGTTGCCGTTAGTGAAAATGGTAACAAGCATAAAATATAG 1116 0.4346 MSTKRNTWKSVILILGCYKVKCPLEESEKQVLKQGSFQRLCLSDVSNSSSTQAIEDLSISFAGSKLYAFTLEELREATNSFSWSNMLGEGGFGPVYKGFVDDKLRPGLKAQTVAVKRLDLDGLQGHREWLAEIIFLGQLRHPHLVKLIGYCYEDEHRLLMYEYMPRGSLENQLFRKYSAAMPWSTRMKIALGAAKGLVFLHESDKPDFTAKLSDFGLAKDGPEGEDTYVTTRIMGTQGYAAPEYIMTGHLTTKSDVYSYGVVLLELLTGRRVVDKSRSNGGKSLVEWARPLLRDQKKLYSIIDCRLEGQFPMKGAMKVAMLAFKCLSPHPNARPTMSDVVKVLEPLQDFDDVFIGPFVYVAVSENGNKHKI 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun8g00671 371 ProSiteProfiles Protein kinase domain profile. 81 354 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun8g00671 371 FunFam Serine/threonine-protein kinase BIK1 47 163 - -
Viun8g00671 371 Pfam Protein tyrosine and serine/threonine kinase 83 343 IPR001245 GO:0004672|GO:0006468
Viun8g00671 371 PANTHER OS01G0588500 PROTEIN-RELATED 49 347 - -
Viun8g00671 371 Gene3D Phosphorylase Kinase; domain 1 42 163 - -
Viun8g00671 371 SUPERFAMILY Protein kinase-like (PK-like) 58 344 IPR011009 -
Viun8g00671 371 Gene3D Transferase(Phosphotransferase) domain 1 164 353 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun8g00671 Viun-Chr8 5400531 5403127 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun8g00671 69 343 Glycoside Hydrolase AT3G07070 48.123 1.30e-87 269
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Viun8g00671 PK_Tyr_Ser-Thr 8.5e-36 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun8g00671 - - gmx:100802636 706.442