Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun8g00656 ATGTCGACATCACAAGTACTGAACCCGATTTCACTAGAGGACATTAGTCTATGCAACGACGACCAAGTTCAGGAGGTTACATTAATGGATTCTATTACTGTCCTCACCAAAGAAAGAGAGTTGGATGAAGTTCCTGAGATAGGAATGGCATTTGAAATGGTTGACAAGGTCAAAGAATTTTACAAGCAATATGCAATTAGATGTGGATTTGGTGTCAGAGTGAGAAGTTCCAGCAAAGGAGAAGACAATGAAATATGCTTCATCAAATTGGTTTACAGTCGTGAAGGCAACTATGTGTCCTACATCCCTCCTGAATTGAAAAGTCAACCAACAAAGACTAAAAATTGTGCTACTTGGATAACAGTTGTGAAGAAGGCAGCACAGTGGGACATAAGGAATGTGATACTTCACCACAATCATGACCTTAGTCCTATGAAGTCAAGGATGATTTGCGAGAACAAAAAAATTAACGTGCAAGTTAAGCGAACACTGGATATGAATGATGAAGCGGGTGTGCGCATTAATAAAAGTTTCTAA 537 0.3911 MSTSQVLNPISLEDISLCNDDQVQEVTLMDSITVLTKERELDEVPEIGMAFEMVDKVKEFYKQYAIRCGFGVRVRSSSKGEDNEICFIKLVYSREGNYVSYIPPELKSQPTKTKNCATWITVVKKAAQWDIRNVILHHNHDLSPMKSRMICENKKINVQVKRTLDMNDEAGVRINKSF 178
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun8g00656 178 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 37 178 - -
Viun8g00656 178 Pfam FAR1 DNA-binding domain 59 143 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun8g00656 Viun-Chr8 5130130 5130666 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Viun8g00656 FAR1 5.3e-11 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun8g00656 - - vun:114194279 360.533