Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun8g00645 ATGACCATAACCTCTAACATTTATGTCATGCCACTGATTTCATCCAACCACATAAATGTAGCTTTGAATTTGGTCTATTTCACGGACACATTTTGCTGTATGCATCTCCCTTCTCTATCATTATCATGTGACTCGGAGATTCTCCTTCACACTGCAAACACTGAGCCCTTACTCAAAAGGAATAAAACTTGGTTCTATGGAGAAAGGAGCAACGGTAGCCTGCTTTTCAACTTCTATGCAGCTTCATGCCCAACTGCAGAACTCATCGTAAGAAACACTGTCACTTCATCTTCTTCTTCTGATCCTTCAATACCTGGGAAGCTTCTTCGCTTGGTTTTTCATGATTGCTTTGTGGAGGGATGTGATGCATCTTTGATGCTATTAGGGAACAATACAGAACAAAGTGATCCAGCAAATAGGTCTATTGGAGGATTTTCAGTTATAGAATCAGCAAAAAGAGTGCTTGAGTTCCTTTGTCCAGGAACAGTTTCTTGTGCTGACATAATTGCTTTGGCTGCAAGAGATGCTGTTGCACTCACTGGTGGTCCTATGATTCAAATTCCCACTGGAAGGAGAGATGGCATGGTTTCAGTTGCTTCAAATGTAAGACCAAACATTTTGGACACAAGTTTTACAATGGATGAGATGATTAACCGATTCTCCAACAAAGGGTTGTCTTTATTTGACCTTGTCATCCTCTCAGGTGCTCACACCATAGGAACAGCTCATTGCAGCTCATTCAGGGATAGGTTTCAACAAGACTCCAAGGGAAAGCTGACACTCATTGACAAAACCTTAGATAGTAGCTATGCTAATGAGTTAATGAAGGAGTGTCCCTTAAGTGCAAGCCCATCAGTGCTAGTTAACAATGATCCTGAAACTTCCATGGTCTTTGACAACCAGTACTACACAAATCTTCTCACCAACAAGGGTTTGTTCCAATCTGATTCTGTCTTGCTTAGTGACAACAGAACAAGGAAAATGGTGGAGGACTTGGCAAAAGATCAACAGTTTTTCTTTGAAAGTTGGGGCCAGTCTTTCTTGAAACTCACTACTATTGGAGTCAAAACTGGTGATGAAGGTGAAATTAGGAGCTTCTGTGCATCAACTAATGCATAA 1119 0.4102 MTITSNIYVMPLISSNHINVALNLVYFTDTFCCMHLPSLSLSCDSEILLHTANTEPLLKRNKTWFYGERSNGSLLFNFYAASCPTAELIVRNTVTSSSSSDPSIPGKLLRLVFHDCFVEGCDASLMLLGNNTEQSDPANRSIGGFSVIESAKRVLEFLCPGTVSCADIIALAARDAVALTGGPMIQIPTGRRDGMVSVASNVRPNILDTSFTMDEMINRFSNKGLSLFDLVILSGAHTIGTAHCSSFRDRFQQDSKGKLTLIDKTLDSSYANELMKECPLSASPSVLVNNDPETSMVFDNQYYTNLLTNKGLFQSDSVLLSDNRTRKMVEDLAKDQQFFFESWGQSFLKLTTIGVKTGDEGEIRSFCASTNA 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun8g00645 372 ProSitePatterns Peroxidases proximal heme-ligand signature. 229 239 IPR019793 -
Viun8g00645 372 FunFam Peroxidase 77 218 - -
Viun8g00645 372 Gene3D - 77 371 - -
Viun8g00645 372 PRINTS Plant peroxidase signature 305 322 IPR000823 GO:0004601|GO:0006979|GO:0020037
Viun8g00645 372 PRINTS Plant peroxidase signature 143 156 IPR000823 GO:0004601|GO:0006979|GO:0020037
Viun8g00645 372 PRINTS Plant peroxidase signature 228 240 IPR000823 GO:0004601|GO:0006979|GO:0020037
Viun8g00645 372 PRINTS Plant peroxidase signature 289 304 IPR000823 GO:0004601|GO:0006979|GO:0020037
Viun8g00645 372 PRINTS Plant peroxidase signature 181 196 IPR000823 GO:0004601|GO:0006979|GO:0020037
Viun8g00645 372 PRINTS Plant peroxidase signature 345 358 IPR000823 GO:0004601|GO:0006979|GO:0020037
Viun8g00645 372 PRINTS Plant peroxidase signature 162 172 IPR000823 GO:0004601|GO:0006979|GO:0020037
Viun8g00645 372 PRINTS Plant peroxidase signature 83 102 IPR000823 GO:0004601|GO:0006979|GO:0020037
Viun8g00645 372 PRINTS Plant peroxidase signature 107 127 IPR000823 GO:0004601|GO:0006979|GO:0020037
Viun8g00645 372 PANTHER - 73 371 IPR000823 GO:0004601|GO:0006979|GO:0020037
Viun8g00645 372 Pfam Peroxidase 91 335 IPR002016 GO:0004601|GO:0006979|GO:0020037
Viun8g00645 372 ProSiteProfiles Plant heme peroxidase family profile. 73 371 IPR002016 GO:0004601|GO:0006979|GO:0020037
Viun8g00645 372 SUPERFAMILY Heme-dependent peroxidases 74 371 IPR010255 GO:0004601|GO:0006979|GO:0020037
Viun8g00645 372 CDD secretory_peroxidase 74 367 IPR033905 GO:0004601|GO:0042744
Viun8g00645 372 Gene3D Peroxidase, domain 2 207 350 - -
Viun8g00645 372 FunFam Peroxidase 207 350 - -
Viun8g00645 372 PRINTS Haem peroxidase superfamily signature 291 306 IPR002016 GO:0004601|GO:0006979|GO:0020037
Viun8g00645 372 PRINTS Haem peroxidase superfamily signature 229 244 IPR002016 GO:0004601|GO:0006979|GO:0020037
Viun8g00645 372 PRINTS Haem peroxidase superfamily signature 105 119 IPR002016 GO:0004601|GO:0006979|GO:0020037
Viun8g00645 372 PRINTS Haem peroxidase superfamily signature 163 180 IPR002016 GO:0004601|GO:0006979|GO:0020037
Viun8g00645 372 PRINTS Haem peroxidase superfamily signature 181 193 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun8g00645 Viun-Chr8 4992099 4995043 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun8g00645 70 371 Peroxidase AT4G31760 64.570 8.66e-150 424
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun8g00645 K00430 K18328 gmx:100803223 545.428