LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Viun8g00644	ATGGAGAAAGGAGCAACGGTTTTTCCTTTTCCCACAGCAGTTTCTTGTCTTTTCATTGTCTTCATTTTCGCTACTTCTGTTTCAGGTAGCCTGCTTTTCAACTTCTATGCAGCTTCATGCCCAACTGCAGAACTCATCGTAAGAAACACTGTCACTTCATCTTCTTCTTCTGATCCTTCAATACCTGGGAAGCTTCTTCGCTTGGTTTTTCATGATTGCTTTGTGGAGGGATGTGATGCATCTTTGATGCTATTAGGGAACAATACAGAACAAAGTGATCCAGCAAATAGGTCTATTGGAGGATTTTCAGTTATAGAATCAGCAAAAAGAGTGCTTGAGTTCCTTTGTCCAGGAACAGTTTCTTGTGCTGACATAATTGCTTTGGCTGCAAGAGATGCTGTTGCACTCACTGGTGGTCCTATGATTCAAATTCCCACTGGAAGGAGAGATGGCATGGTTTCAGTTGCTTCAAATGTAAGACCAAACATTTTGGACACAAGTTTTACAATGGATGAGATGATTAACCGATTCTCCAACAAAGGGTTGTCTTTATTTGACCTTGTCATCCTCTCAGGTGCTCACACCATAGGAACAGCTCATTGCAGCTCATTCAGGGATAGGTTTCAACAAGACTCCAAGGGAAAGCTGACACTCATTGACAAAACCTTAGATAGTAGCTATGCTAATGAGTTAATGAAGGAGTGTCCCTTAAGTGCAAGCCCATCAGTGCTAGTTAACAATGATCCTGAAACTTCCATGGTCTTTGACAACCAGTACTACACAAATCTTCTCACCAACAAGGGTTTGTTCCAATCTGATTCTGTCTTGCTTAGTGACAACAGAACAAGGAAAATGGTGGAGGACTTGGCAAAAGATCAACAGTTTTTCTTTGAAAGTTGGGGCCAGTCTTTCTTGAAACTCACTACTATTGGAGTCAAAACTGGTGATGAAGGTGAAATTAGGAGCTTCTGTGCATCAACTAATGCATAA	990	0.4121	MEKGATVFPFPTAVSCLFIVFIFATSVSGSLLFNFYAASCPTAELIVRNTVTSSSSSDPSIPGKLLRLVFHDCFVEGCDASLMLLGNNTEQSDPANRSIGGFSVIESAKRVLEFLCPGTVSCADIIALAARDAVALTGGPMIQIPTGRRDGMVSVASNVRPNILDTSFTMDEMINRFSNKGLSLFDLVILSGAHTIGTAHCSSFRDRFQQDSKGKLTLIDKTLDSSYANELMKECPLSASPSVLVNNDPETSMVFDNQYYTNLLTNKGLFQSDSVLLSDNRTRKMVEDLAKDQQFFFESWGQSFLKLTTIGVKTGDEGEIRSFCASTNA	329

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Viun8g00644	329	PANTHER	-	14	328	IPR000823	GO:0004601\|GO:0006979\|GO:0020037
	Viun8g00644	329	Gene3D	-	34	328	-	-
	Viun8g00644	329	SUPERFAMILY	Heme-dependent peroxidases	31	328	IPR010255	GO:0004601\|GO:0006979\|GO:0020037
	Viun8g00644	329	ProSiteProfiles	Prokaryotic membrane lipoprotein lipid attachment site profile.	1	16	-	-
	Viun8g00644	329	FunFam	Peroxidase	34	175	-	-
	Viun8g00644	329	Pfam	Peroxidase	48	292	IPR002016	GO:0004601\|GO:0006979\|GO:0020037
	Viun8g00644	329	ProSitePatterns	Peroxidases proximal heme-ligand signature.	186	196	IPR019793	-
	Viun8g00644	329	FunFam	Peroxidase	164	307	-	-
	Viun8g00644	329	Gene3D	Peroxidase, domain 2	164	307	-	-
	Viun8g00644	329	PRINTS	Plant peroxidase signature	302	315	IPR000823	GO:0004601\|GO:0006979\|GO:0020037

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Viun8g00644	Viun-Chr8	4992090	4995043	Dispersed/Wgd

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Viun8g00644	15	328	Peroxidase	AT4G31760	62.776	5.59e-151	425

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Viun8g00644	K00430		K18328	gmx:100803223	585.489

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