Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun8g00625 ATGGAACCAACATGCTTGGATACTTCACTCAATCTCAACGTTCATCCTTCTTCTCTTCACACGGACATGGTTTTGGAGGAAGAGTTGCAGAGGCTGAGACGTGAGAACAAGAGGTTGACTGAGATGTTGACCCACTTGTGTGACAGCTACATGGTTTTGCAGAAGCAATTGACCCAATTGATGAACACAAATTTAGAGCAAGAGCAACTTGAATCACGCAAGAGAAAAGCAGAGAGTGAGTGTTGTACCAACAAATTTGGTGTTGTTAACAACAACAACAACAACAATGGTGAGTGCAGCTCCATAACAGAGGATTCCTTCAAAAGGTACAAGGATTTCAGCTCCTCCCCAAAGGTTCAGAAGGTTCTTGTAAAGACAGAAGCTTCTAATAACAGCTTATATGTGATGGATGGATATCAATGGAGGAAATATGGTCAAAAGGTCACTAGGGATAACCCTTCTCCTAGAGCTTACTTCAGGTGCTCCTTTGCCCCAACCTGCCCCGTTAAAAAGAAGGTGCAAAGGAGTTTAGAAGACCCTACAATACTTGTTACAACATATGAAGGAGAGCATAACCATTGTAATGAAAGAGGTGAAATTGGTTCAAAGCAAAGTGAAGGAGGAAAAGGGTCAAGTCCAACTGTAAGGCTTGATTTGGTCAAATCAGGATTGTTTGAAAGTGCCCAAAAGTCATCTATCCAACAATTTTTGGTTCAACAAATGGCTACTTCTTTGACAAGGGATCCCAATTTCACTACAGCACTTGCCACTGCCATTTCAGGAAAAATTCTAGAGGCCAAATGGTGA 807 0.4176 MEPTCLDTSLNLNVHPSSLHTDMVLEEELQRLRRENKRLTEMLTHLCDSYMVLQKQLTQLMNTNLEQEQLESRKRKAESECCTNKFGVVNNNNNNNGECSSITEDSFKRYKDFSSSPKVQKVLVKTEASNNSLYVMDGYQWRKYGQKVTRDNPSPRAYFRCSFAPTCPVKKKVQRSLEDPTILVTTYEGEHNHCNERGEIGSKQSEGGKGSSPTVRLDLVKSGLFESAQKSSIQQFLVQQMATSLTRDPNFTTALATAISGKILEAKW 268
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun8g00625 268 SMART WRKY_cls 135 195 IPR003657 GO:0003700|GO:0006355|GO:0043565
Viun8g00625 268 Coils Coil 22 49 - -
Viun8g00625 268 Pfam WRKY DNA -binding domain 137 193 IPR003657 GO:0003700|GO:0006355|GO:0043565
Viun8g00625 268 MobiDBLite consensus disorder prediction 193 213 - -
Viun8g00625 268 ProSiteProfiles WRKY domain profile. 130 196 IPR003657 GO:0003700|GO:0006355|GO:0043565
Viun8g00625 268 Coils Coil 53 80 - -
Viun8g00625 268 Gene3D WRKY domain 118 195 IPR036576 GO:0003700|GO:0006355|GO:0043565
Viun8g00625 268 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 23 263 IPR044810 GO:0003700
Viun8g00625 268 SUPERFAMILY WRKY DNA-binding domain 133 193 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun8g00625 Viun-Chr8 4795886 4797483 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun8g00625 6 265 WRKY Transcription Factor Family AT1G80840 42.568 2.87e-68 212
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Viun8g00625 WRKY 7.3e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun8g00625 - - gmx:100810978 375.555