Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun8g00622 ATGGCATTGTTCCGCAAGTTCTTCTATAAGAAGCCCCCAGATGGGCTTCTAGAAATCACTGAAAGGGTTTATGTCTTTGATTACTGCTTTACCACGGATGTTATGGAAGAAGATGAATATAGAGTGTATCTAGGAGGAATAATTGGGCAACTTCGTGGTCACTTCCCCGATGCTTCATTCATGGTGTTCAACATGCGGGAAGGAGACAGCCAAAGCCAGATTTCAAACATTTTGTGTGACTATGATATGACTGTGATAGATTATCCTCGACAGTATGAAGGGTGCCCGTTGCTTACCATGGAGATGATCCATCATTTCTTGAGATCAGGTGAAAACTGGCTTCAACTTGGGCATCAAAATGTTGTCTTGATGCATTGTGAACGAGGTGGGTGGCCGTTACTAGCGTTTATGCTGGCTGCACTCTTGATTTATAGGAAGATGTTTACAGGGGAGCAGAAAACACTAGACATGATATATAAACAAGCTCCTCGGGAACTTCTGCAGTTGATGTCACCATTGAATCCTTTACCTTCACAATTGAGATATCTTCAGTACATATCAAGAAGAAATGTTGGTTCAGAATGGCCTCCTCTTGATAGGGCACTTACTTTGGACTGTGTAATTATAAGACTCATTCCTAACATGGGTGGAGAGGGTGGTTGCCGTCCTATATTTAGAATATATGGGCAAGACCCTTTTATTCCTGCAGATCGAACTCCCAAAGTTCTCTTTTCAACTCCAAAAAGGAGCAAACTTGTTCGCTACTGTAAGCAGACTGATTGTGAACTGGTTAAGATTGACATCCACTGTCATGTTCAAGGAGATGTCGTTTTTGAGTGTATTCATCTGCACAGTGATTTAGAGCATGAAGAAATGATGTTTCGGGTGATGTTTAATACAGCATTCATAAGATCAAATATTTTGATGCTTAACCGTGATGAAATCGACATACTATGGAATGCTAAAGATTGCTTCCCTAAGAATTTCAGAGTGGAGGTTCTTTTCTCAGATATGGATGCTTCATCTTCTGTTATTTCAATTGATCTGCCTCGTGTTGAGGAGAAAGATGGCCTCCCTGTTGAAGCATTTGCAAAGGTCAAGGAGATTTTCAGCAACGTGGATTGGCTAGATTCAAAGGAAGAAGTAGCAAGTGTGCTCCAACATATCACATCTTCAAATATCCTTCTGGAAAAATTCGACGCTGGGGTTTCTGCTGCAACTAGTGGCTTGCAAAGGGAGTCATCTGAAAATTCTGCAGCTGTTTTGAAGGCATACAGTGATCCAAACATTCAGACTTCTGCAGTTCAGGGGAAACATTCTACATCCTCATTGGGATCGTCTTTGGATTTTGCTTTGGGAAATAAGACCGAACCATTAGAGTCAAAGACATTGTCCGAAAATGACATGAAGACTCTAGAGTCATTAGCATCCACTGATGGAGATTCATTGGCAAAGAAGATTGATTTGTTAGGATCAAAGGAGAAAACAATTGATAACTCATCTGTTAGTGCTCCTATGGAAAAGAACAATGACTCTCTAGAACTGAAGGAATCACCAGAAAATAGCCTCAGGACTTCTGCTTCCACAAGTCAGGGGAAACAGCTTACTCCCTCATTAGATGAGGCCAAGGTTCCATATAAGGATGCATATTCAATGACACAGGACGTGGGACCATTAGAGACAAAGGAAAAGGATACTGAATCATTAGAAACAAAGTCATTAATGGAACAACCTGTTGAAGCAAGCACAATTAAAACGAAAATTGAACCTCATGAATTGCAGGTTTCCCTCCAGCTTCCCACTCAAACAAAAATAATTTCTTCACCGGATCATGAAGCAGTGGATATCAAAGAAGTAACTCATGCAGTTACAGTATCTCCTCCAGCTTCAGATTCCAAGGTGTTGAAAACTTCAGTTGATGCTCTTAAAACCACGGAAAAGGCTTTTGAATCCCTTTCTCCTGCAGCTGCAACTACACCACCGCCACCGCCACCACCATCTCCTCCTCCCCCATCATTTTCTCCAGCTCCTTCCCTTCCTAAAGGTCCTCCTCCACCGCCGCCTCCACCTGCGCTGTCTGGGTTTCCATCTTCATTGGGTATAAATGAATCAGTTTCTGTGCCTAGCACTCCTCCTCCTCCCCCGCCTCCACCTCCTAGCCTTTCAGGTTCTGCACCACCACCACCACCCCCTCCTCCCGCTTCTGCATTCCAAAATTCTTTGTCTGAGAACTCCAAAAGTGGTCCTCCTGTACCCCCACCTCCACCTCCTAGCCTTCCTGGTTCAGCTCCATCATCATCACCTTCAGCGCCACTACCACCCCCTCCTCCAGGCTCTACGTCCCAAAGTTCTTTGTCTAGCTCCACAAATGTTCCACCTGTACCCCCACCTCCCCTTTCTGCCAATGGATTGTCAAAACCTGGAGTTCCTGGACCTCCTGGAGTTCCTGGACCACCTGGACCACCTGGAGTTCCTGGACCACCTTCTGCTCCTTTTGGTGCAAAGGGTCGTGGCCTGATGCGAGCTAATGCAAAAGGTCAATCTAAGAGGAGCAATCTGAAACCTTACCATTGGTTAAAATTAACAAGGGCGATGCAAGGAAGCTTATGGGCTGAGACACAAAAACTAGATGAGTTTTGTAGGGCTCCAGAGTTTGACATGTCAGAACTTGAAACTTTGTTCTCCGCAGCTTCTCCAGCTTCTAATGAAAAAGGGGGAAAGTCAAATCGCCGTGCCTCTGGGCAAAAAGTTGAGAAAGTTCAACTGATTGAGCTCAGGCGGGCCTATAACTGTGAGATCATGCTTACAAAAGTCAAAATCCCTTTGCCTGACTTGATGTGTGCTGTGCTTGCAATGGATGATACAGTATTAGATATCGATCAAATTGAGAACCTTATAAAATTCTCTCCAACCAAAGAAGAGATGGAAACACTCAAGAACTATACCGGGAATAAGGACAACTTGGGAAAGTGTGAGCAGTTCTTCTTAGAATTGATGAAAGTGCCAAGAGTGGAAAGCAAGCTAAGAGTTTTCTCTTTTAAGATGCAATTCTTATCCCAGGTTTCAGAGCTGAAAAGAGATTTGAATATTGTGAATTCTGCATCTGAAGAGATAAGGAATTCAGTCAAGTTGAAAAGAATCATGCAGACCATTCTTTCTCTGGGTAATGCTTTGAACCATGGAACTGCAAGAGGTTCGGCTGTTGGGTTTCGATTGGATAGTCTCCTTAAACTAACTGATACACGAGCAAGAAACAACAAGATGACTCTTATGCATTATCTCTGTAAGGTGCTTGCTGAAAAACTAGGAGAACTTCTCGATTTCCATAAAGACCTATTGAGTTTGGAGGCGGCAACCAAGATACAATTAAAATACTTGGCAGAGGAAATGCAAGCTATTAGTAAAGGACTGGAGAAAGTAGTTCAGGAATTGACTGCATCAGAGAATGATGGACCTGTGTCAGAATTCTTCTGCCAGATTCTGAAGGAATTTCTTTCTTATGCTGAATCTGAAGTAAGGTCTTTGGCTCAACTTTATGCCAATGTGGGTAGAAATGCAGATGCATTGGCTTTATACTTTGGTGAAGATCCAGCACGTTGTCCATTTGAACAAGTTGTATCTACGCTGCTCAACTTTGTGAGGTTGTTCGTGAAAGCACATGACGAAAATTGCAAGCAGATTGAACTAGACAGAAAGAGAGCAGAGAAGGAAGCAGAGCATGAGAAGTTGAAGCTAGCTGCTGCCAAGAAGGAGGCTGAACATATGATGAGGACCACCATAAAGAGTGGGGATATTAAATGA 3801 0.4317 MALFRKFFYKKPPDGLLEITERVYVFDYCFTTDVMEEDEYRVYLGGIIGQLRGHFPDASFMVFNMREGDSQSQISNILCDYDMTVIDYPRQYEGCPLLTMEMIHHFLRSGENWLQLGHQNVVLMHCERGGWPLLAFMLAALLIYRKMFTGEQKTLDMIYKQAPRELLQLMSPLNPLPSQLRYLQYISRRNVGSEWPPLDRALTLDCVIIRLIPNMGGEGGCRPIFRIYGQDPFIPADRTPKVLFSTPKRSKLVRYCKQTDCELVKIDIHCHVQGDVVFECIHLHSDLEHEEMMFRVMFNTAFIRSNILMLNRDEIDILWNAKDCFPKNFRVEVLFSDMDASSSVISIDLPRVEEKDGLPVEAFAKVKEIFSNVDWLDSKEEVASVLQHITSSNILLEKFDAGVSAATSGLQRESSENSAAVLKAYSDPNIQTSAVQGKHSTSSLGSSLDFALGNKTEPLESKTLSENDMKTLESLASTDGDSLAKKIDLLGSKEKTIDNSSVSAPMEKNNDSLELKESPENSLRTSASTSQGKQLTPSLDEAKVPYKDAYSMTQDVGPLETKEKDTESLETKSLMEQPVEASTIKTKIEPHELQVSLQLPTQTKIISSPDHEAVDIKEVTHAVTVSPPASDSKVLKTSVDALKTTEKAFESLSPAAATTPPPPPPPSPPPPSFSPAPSLPKGPPPPPPPPALSGFPSSLGINESVSVPSTPPPPPPPPPSLSGSAPPPPPPPPASAFQNSLSENSKSGPPVPPPPPPSLPGSAPSSSPSAPLPPPPPGSTSQSSLSSSTNVPPVPPPPLSANGLSKPGVPGPPGVPGPPGPPGVPGPPSAPFGAKGRGLMRANAKGQSKRSNLKPYHWLKLTRAMQGSLWAETQKLDEFCRAPEFDMSELETLFSAASPASNEKGGKSNRRASGQKVEKVQLIELRRAYNCEIMLTKVKIPLPDLMCAVLAMDDTVLDIDQIENLIKFSPTKEEMETLKNYTGNKDNLGKCEQFFLELMKVPRVESKLRVFSFKMQFLSQVSELKRDLNIVNSASEEIRNSVKLKRIMQTILSLGNALNHGTARGSAVGFRLDSLLKLTDTRARNNKMTLMHYLCKVLAEKLGELLDFHKDLLSLEAATKIQLKYLAEEMQAISKGLEKVVQELTASENDGPVSEFFCQILKEFLSYAESEVRSLAQLYANVGRNADALALYFGEDPARCPFEQVVSTLLNFVRLFVKAHDENCKQIELDRKRAEKEAEHEKLKLAAAKKEAEHMMRTTIKSGDIK 1266
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun8g00622 1266 MobiDBLite consensus disorder prediction 790 829 - -
Viun8g00622 1266 Coils Coil 1217 1253 - -
Viun8g00622 1266 SMART it6_source 596 1264 IPR015425 -
Viun8g00622 1266 ProSiteProfiles Formin homology-2 (FH2) domain profile. 843 1242 IPR015425 -
Viun8g00622 1266 Gene3D Formin, FH2 domain 840 1227 IPR042201 -
Viun8g00622 1266 Pfam Formin Homology 2 Domain 848 1216 IPR015425 -
Viun8g00622 1266 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 12 187 IPR029021 -
Viun8g00622 1266 PRINTS Proline rich extensin signature 664 680 - -
Viun8g00622 1266 PRINTS Proline rich extensin signature 708 733 - -
Viun8g00622 1266 PRINTS Proline rich extensin signature 643 664 - -
Viun8g00622 1266 MobiDBLite consensus disorder prediction 498 536 - -
Viun8g00622 1266 MobiDBLite consensus disorder prediction 557 587 - -
Viun8g00622 1266 Gene3D - 196 341 - -
Viun8g00622 1266 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 201 338 IPR035892 -
Viun8g00622 1266 PANTHER FORMIN-J 1 736 - -
Viun8g00622 1266 MobiDBLite consensus disorder prediction 707 736 - -
Viun8g00622 1266 Pfam C2 domain of PTEN tumour-suppressor protein 200 336 IPR014020 -
Viun8g00622 1266 ProSiteProfiles C2 tensin-type domain profile. 199 338 IPR014020 -
Viun8g00622 1266 MobiDBLite consensus disorder prediction 519 536 - -
Viun8g00622 1266 SMART PTEN_C2_2 197 337 IPR014020 -
Viun8g00622 1266 MobiDBLite consensus disorder prediction 747 780 - -
Viun8g00622 1266 MobiDBLite consensus disorder prediction 645 851 - -
Viun8g00622 1266 MobiDBLite consensus disorder prediction 656 694 - -
Viun8g00622 1266 Gene3D Protein tyrosine phosphatase superfamily 12 191 IPR029021 -
Viun8g00622 1266 SUPERFAMILY Formin homology 2 domain (FH2 domain) 918 1242 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun8g00622 Viun-Chr8 4760105 4776400 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun8g00622 1 402 FH2 protein (formin) Gene Family AT2G25050 70.471 0.0 638
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun8g00622 - - pvu:PHAVU_001G042000g 1006.51