Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun8g00611 ATGGCTGATTTTTCTTCAGTTTCTTCTTCTCTTTTGCTCACCTTCTTCATCCTCTTCGGCCTCTCTGTAGCTAAGGAAATACTAGTTGGAGGTAAGACTGATGCTTGGAGAATTCCAGCCTCTGAATCAGACTCACTTAACCAATGGGCAGAAAGGTCTCGTTTCCAAGTTGGCGACTTTCTTGTTTGGAAATATGATGGTGGAAAAGACTCAGTTTTGCAAGTGAGCAGAGAAGAGTATGTAAACTGCAGCACCTCAAACCCTATAAAGGTGCACAGTGATGGAACAACGAAGGTGAAGCTTGACCGTCCTGGGCCATTCTACTTCATCAGTGGGGCACAGGGTCACTGTGAGAAGGGTCAGAAGCTTGTGGTGGTGGTTTTGACTCCAAGGGGAAGATCCAGTGGCATTGTTTCTTCACCAGCACCTGCTCCTGCACCTTTTCTTGCTGAGTTTGAAGGTCCTGCTGTTGCTCCTACTAGCAGTGCCAATGCTTTGCATGGGGGCATTCTCGTGGTGGCTCTGGGTGCTATGTTGGGACTTTTTATGTGA 552 0.4746 MADFSSVSSSLLLTFFILFGLSVAKEILVGGKTDAWRIPASESDSLNQWAERSRFQVGDFLVWKYDGGKDSVLQVSREEYVNCSTSNPIKVHSDGTTKVKLDRPGPFYFISGAQGHCEKGQKLVVVVLTPRGRSSGIVSSPAPAPAPFLAEFEGPAVAPTSSANALHGGILVVALGAMLGLFM 183
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun8g00611 183 Gene3D - 23 131 IPR008972 -
Viun8g00611 183 Pfam Plastocyanin-like domain 36 121 IPR003245 GO:0009055
Viun8g00611 183 ProSiteProfiles Phytocyanin domain profile. 25 129 IPR003245 GO:0009055
Viun8g00611 183 SUPERFAMILY Cupredoxins 24 128 IPR008972 -
Viun8g00611 183 PANTHER BLUE COPPER PROTEIN 26 142 IPR039391 GO:0009055
Viun8g00611 183 CDD OsENODL1_like 25 128 IPR041846 -
Viun8g00611 183 FunFam Early nodulin-like protein 1 24 132 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun8g00611 Viun-Chr8 4661297 4662605 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun8g00611 8 182 Phytocyanin Superfamily AT4G31840 53.889 1.13e-61 187
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun8g00611 - - gmx:100527857 262.692
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun8g00611 8 4661297 4662605 Viun8g00611 8 4661297 4662605 ECH
Viun8g00611 8 4661297 4662605 Viun9g03168 9 39042152 39043057 PCT