Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun8g00599 ATGTTGGCGTCCTTTGAAAATTTCCACTATCAGAAAACTTTTCTTCTGTTCTTCGTTCTCTTTATCCTTCCAATAAATTTAGCTCAACCACTTTCCTTCACCATAACTAACTTTAACGATACTGAAAGTGCAAGCATAGTTGGATACGCAGGCGTAGCCCTCATAGAGAACGGAGCTGCAGTTCTCAATCCACTCGTCAAAAATGGAGTTGGAAGAGCCGTCTATGGCCAACCTCTACGCATCAAAAACTCTTCCAACGGACATGTCACTGACTTTTCAACTCGTTTTTCATTCACAATCGACGTATCTTTAGGAACCATCTATGGTGATGGCTTTGCCTTCTACTTGGCACCCCTAGCATACCGGATTCCGACCACCACTTCTTATGGCTCCCGTCTCGGGCTATACGATGACACCCAAAATAACATCGTTGCTGTCGAATTCGACACTTTCATAAACGAGTTAGACCCACCAATGCAACACGTAGGGATCAACAATAACTCTGTGGCATCTCTCAATTATACCAAGTTTGATATTGAGAGCAACACAGGGAAGATGGGGCATGCGTTAATAACTTATAATGCTTCTGCCAAACTCCTTGCTGTTTCGTGGTCGTTTGATGGAACTGGTTCTTCTTCTACTCCTACCGCTTATCTCTCGTACAAGATTGACCTGTGGGCTATTTTACCGGAGTGGGTCAATGTTGGGTTTTCGGGTTCAACTGGATCGTCCACTGAGAAAAATGTGATCCATTCCTGGGAGTTCAGTTCAAGCCTGGATATTAATTCTACGCATGGAGAGGGAAAAAAAGAAAATGACATCGCAACCAAATGCAAGGTTCAGGTCAAAATAGTAGTTGTTACAGTGATTTGCTCTATTGTTTTTCTGCTCGTGGTTATTAGTGTTTCTTGGATGACCATCAAAAAGAGAAGAACGGAGGATGGTTTTGGTTTCGATAGAGAAGCAATGCCTAGAAGGTTTGGTTATGACGAAATAGTTGCAGCTACCAACGGGTTTGTAGATGATAGAAGGCTTGGAGAAGGAGGCTCTGGACAAGTTTACAAAGGGTTTCTGAGTGATTTACGGCGCGTGGTTGCAGTGAAAAGGATATTTTCTGATGTTGAAGATTCTGAGAGAATATTTATAAACGAGGTGAAGATTATAAGTCGTCTTATACATAGAAACCTTGTGCAATTCATGGGGTGGTGCCACGAGAAAGAGGAATTGTTACTGGTTTTTGAGTACATGATTATACGACGACTTTGTTTTTTCAAGAAAAAAAAAAAAAGAAACCTTTAA 1299 0.4157 MLASFENFHYQKTFLLFFVLFILPINLAQPLSFTITNFNDTESASIVGYAGVALIENGAAVLNPLVKNGVGRAVYGQPLRIKNSSNGHVTDFSTRFSFTIDVSLGTIYGDGFAFYLAPLAYRIPTTTSYGSRLGLYDDTQNNIVAVEFDTFINELDPPMQHVGINNNSVASLNYTKFDIESNTGKMGHALITYNASAKLLAVSWSFDGTGSSSTPTAYLSYKIDLWAILPEWVNVGFSGSTGSSTEKNVIHSWEFSSSLDINSTHGEGKKENDIATKCKVQVKIVVVTVICSIVFLLVVISVSWMTIKKRRTEDGFGFDREAMPRRFGYDEIVAATNGFVDDRRLGEGGSGQVYKGFLSDLRRVVAVKRIFSDVEDSERIFINEVKIISRLIHRNLVQFMGWCHEKEELLLVFEYMIIRRLCFFKKKKKRNL 432
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun8g00599 432 ProSitePatterns Protein kinases ATP-binding region signature. 345 368 IPR017441 GO:0005524
Viun8g00599 432 FunFam L-type lectin-domain containing receptor kinase IX.1 324 415 - -
Viun8g00599 432 SUPERFAMILY Concanavalin A-like lectins/glucanases 29 261 IPR013320 -
Viun8g00599 432 Pfam Legume lectin domain 31 266 IPR001220 GO:0030246
Viun8g00599 432 ProSitePatterns Legume lectins beta-chain signature. 144 150 IPR019825 -
Viun8g00599 432 Pfam Protein kinase domain 340 421 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun8g00599 432 Gene3D - 29 283 - -
Viun8g00599 432 ProSiteProfiles Protein kinase domain profile. 339 432 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun8g00599 432 CDD lectin_legume_LecRK_Arcelin_ConA 31 259 IPR001220 GO:0030246
Viun8g00599 432 Gene3D Phosphorylase Kinase; domain 1 324 415 - -
Viun8g00599 432 PANTHER - 56 417 - -
Viun8g00599 432 SUPERFAMILY Protein kinase-like (PK-like) 321 427 IPR011009 -
Viun8g00599 432 FunFam L-type lectin-domain containing receptor kinase IX.1 29 273 - -
Viun8g00599 432 ProSitePatterns Legume lectins alpha-chain signature. 229 238 IPR000985 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun8g00599 Viun-Chr8 4533768 4535143 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun8g00599 13 416 Receptor kinase-like Gene Family AT5G10530 39.336 2.12e-81 261
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Viun8g00599 Lectin_legB 1.3e-56 CL0004
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun8g00599 - - gmx:100813751 564.303