Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun8g00598 ATGAGGTTGCTAGAGATGGTGACAACTTTTGTTTTTCTGCTGGTTCTTCATCCTCCTTTTCTTAAAACTGTGGAATCACTAAATTTCAACATAACAAACTTCAACGATCCTGAGAGTGAACAAAACATGGCATACATAGGTGATGGCAAAGCCAGCAACGGCAGCGTAGAACTCAACATCGTGGACTATCTTTTCCGCGTTGGAAGAGCTTTGTATGCAAAACCGATGCACTTGTGGGATCAATCATCCAATGTTCTCACAGACTTCACCACGCGCTTCACTTTCTCCATCGACAGAGCCAAAAACGGCACCTATGCTGATGGTTTCGCCTTCTACATGGCCCCTCATGGCTACCCGATTCCTCCCAACTCAGGGGGTGGCACTTTTGCCCTATTCAACACCACTTCCAATACCTTTATTCCCCATAATCACGTTCTTGCGGTTGAGTTTGACACATTCAATGGCACCATTGACCCTCCCATGCAGCACGTTGGCATAGACGATAACTCTCTCAGCTCCGTGGCTTCTGCCAAGCTTGACGTTGACAAAAACCTTGGAAAGAAATGTAACGTTTTGATAACCTACACTGCTTCCAACAAGACACTCTTTGTGGCTTGGTCCTTCAACGGAACAGCAACTTCACACTCCAATTCTTCACTTTCTTACCAGATTGACCTCATGGAAATTCTACCCGAGTGGGTGGATGTCGGGTTCTCTGCTTCAACAGGCGAATTCACTGAACACAACGTTATTTACTCCTGGGACTTTAGTTCAACGTTGAATTCCGATGCTACGGATAATTCCTCCGGTGGGGACGGGAACGGGAAACGAAAAGTTTGGGTGATTGCTGTGGCGACTTCTTCAGCGGTCTTGGTGGTCGTCGCTGGGAGTGTTGCAGTTTGGGCAATGATGACGAAGAAAAGAAGGGATAAGGTTGATAAGAGTAATGACGGTGAAGTGGGAGCTAACTCGGTTAAGTTTGATTTGGATAGGGCAACTCTACCAAGAAGATTTGATTACAAAGAACTACTTGCAGCCACCAACGGATTCGCAGATGATAGAAAGCTTGGACGAGGAGGCTCGGGACAGGTTTACAAAGGGGTTCTGAGTAATTTAGGAAGGGTTGTTGCTGTGAAAAGGATTTTCGCCAACTTCGCAAATTCAGAGAGAGTTTTCATCAATGAGGTTAGGGTTATAAGCCGTCTTATACACAGAAACTTGGTGCAGTTCGTAGGGTGGTGCCACGAGCAAGGTGAGTTTCTGTTGCTTTTTGAATACATGCCTAATGGAAGCCTCGACACTCATCTCTTTGGGGACAAAAAACCTTTGACTTGGGATGTTAGGTACAAGGTAGCGTTGGGCGTTGCTTTGGGACTTCGTTATCTTCACGAGGATGCGGAGCAGAGTGTTCTTCACAGGGATATTAAGTCGGCGAATGTGTTGTTGGACACAGATTTTAGCACAAAGCTTGGAGATTTTGGGATGGCAAAGTTGGTGGATCCAAGGTTGAAGACTCAGAGGACAGGGGTGGTGGGGACTTACGGGTACCTTGCCCCAGAATACATGAACGGAGGTAGGGCTAGCAAGGAATCAGACATTTATAGTTTTGGGGTTGTGGCTCTTGAGATCGCATGTGGAAGGAGGACATACCGTGATGGAGAGTTTCATGTGCCTCTGAGGAACTGGGTGTGGCAACAGTATGTGGAGGGGAATGTGATGGATGTTGTTGATGAGAGATTGAAGAAGGAGTTTAATGTGGATGAAATGAGAAGCTTGATCATTGTGGGGTTGTGGTGTACCAACCCTAACGACAAGGAAAGGCCAAAGGCCGCACAAGTAATAAATGTTCTGGAGCTAGAAGCGCCATTACCAGAGCTTCCACTTGATCTGCATGATCGTCCTCCTGCTTCTCTAGTTACATATTCACAACAACCCAATTCTCAGTCCATGCAGACACTACCTTTCACCGACAGCTTTATAAGTGTTGGACGTTAG 1995 0.4637 MRLLEMVTTFVFLLVLHPPFLKTVESLNFNITNFNDPESEQNMAYIGDGKASNGSVELNIVDYLFRVGRALYAKPMHLWDQSSNVLTDFTTRFTFSIDRAKNGTYADGFAFYMAPHGYPIPPNSGGGTFALFNTTSNTFIPHNHVLAVEFDTFNGTIDPPMQHVGIDDNSLSSVASAKLDVDKNLGKKCNVLITYTASNKTLFVAWSFNGTATSHSNSSLSYQIDLMEILPEWVDVGFSASTGEFTEHNVIYSWDFSSTLNSDATDNSSGGDGNGKRKVWVIAVATSSAVLVVVAGSVAVWAMMTKKRRDKVDKSNDGEVGANSVKFDLDRATLPRRFDYKELLAATNGFADDRKLGRGGSGQVYKGVLSNLGRVVAVKRIFANFANSERVFINEVRVISRLIHRNLVQFVGWCHEQGEFLLLFEYMPNGSLDTHLFGDKKPLTWDVRYKVALGVALGLRYLHEDAEQSVLHRDIKSANVLLDTDFSTKLGDFGMAKLVDPRLKTQRTGVVGTYGYLAPEYMNGGRASKESDIYSFGVVALEIACGRRTYRDGEFHVPLRNWVWQQYVEGNVMDVVDERLKKEFNVDEMRSLIIVGLWCTNPNDKERPKAAQVINVLELEAPLPELPLDLHDRPPASLVTYSQQPNSQSMQTLPFTDSFISVGR 664
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun8g00598 664 FunFam L-type lectin-domain containing receptor kinase IX.1 427 627 - -
Viun8g00598 664 ProSitePatterns Legume lectins beta-chain signature. 146 152 IPR019825 -
Viun8g00598 664 CDD STKc_IRAK 356 618 - -
Viun8g00598 664 ProSiteProfiles Protein kinase domain profile. 350 626 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun8g00598 664 Gene3D - 24 271 - -
Viun8g00598 664 SUPERFAMILY Protein kinase-like (PK-like) 334 642 IPR011009 -
Viun8g00598 664 PANTHER - 57 622 - -
Viun8g00598 664 ProSitePatterns Serine/Threonine protein kinases active-site signature. 470 482 IPR008271 GO:0004672|GO:0006468
Viun8g00598 664 Pfam Legume lectin domain 26 267 IPR001220 GO:0030246
Viun8g00598 664 ProSitePatterns Protein kinases ATP-binding region signature. 356 379 IPR017441 GO:0005524
Viun8g00598 664 CDD lectin_legume_LecRK_Arcelin_ConA 27 260 IPR001220 GO:0030246
Viun8g00598 664 Gene3D Phosphorylase Kinase; domain 1 315 426 - -
Viun8g00598 664 SUPERFAMILY Concanavalin A-like lectins/glucanases 25 266 IPR013320 -
Viun8g00598 664 SMART serkin_6 350 623 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun8g00598 664 ProSitePatterns Legume lectins alpha-chain signature. 230 239 IPR000985 -
Viun8g00598 664 Gene3D Transferase(Phosphotransferase) domain 1 427 622 - -
Viun8g00598 664 FunFam L-type lectin-domain containing receptor kinase IX.1 335 426 - -
Viun8g00598 664 Pfam Protein kinase domain 351 615 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun8g00598 664 FunFam L-type lectin-domain containing receptor kinase IX.1 25 274 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun8g00598 Viun-Chr8 4524679 4527493 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun8g00598 7 630 Receptor kinase-like Gene Family AT5G10530 44.741 3.02e-175 512
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Viun8g00598 Pkinase 2.7e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun8g00598 - - vra:106763732 1134.4