Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun8g00594 ATGAGAATGAGGTTGCTAGAGATGGTGACAACTTTTGTTCTTGTGCTGGTTCTTCATCCACCTTTTCTTAAAACTGTGGAATCACTAAATTTCAACATAACAAACTTCAACGATCCTGAGAGTGAACAAAACATGGCATACATAGGTGATGGCAAAGCCAGCAACGGCAGCGTAGAACTCAACATCGTGGACTATCTTTTCCGCGTTGGAAGAGCTTTGTATGCAAAACCGATGCACTTGTGGGATCAATCATCCAATGTTCTCACAGACTTCACCACGCGCTTCACTTTCTCCATCGACAGAGCCAAAAACGGCACCTATGCTGATGGTTTCGCCTTCTACATGGCCCCTCATGGCTACCCGATTCCTCCCAACTCAGGGGGTGGCACTTTTGCCCTATTCAACACCACTTCCAATACCTTTATTCCCCATAATCACGTTCTTGCGGTTGAGTTTGACACATTCAATGGCACCATTGACCCTCCCATGCAGCACGTTGGCATAGACGATAACTCTCTCAGCTCCGTCACTTATGCCAAGTTTGACATTGACAAAAACCTGGGAAAGAAATGTAACGTTTTGATAACCTACAGTGCCTCCAACAAGACCCTCTTTGTGGCTTGGTCCTTCAACGGAACAGCAACGTCACACTCCAATTCTTCACTGTCATACAAGATTGACCTCATGGAAATTCTACCCGAGTGGGTGGATGTCGGGTTCTCCGCTTCAACAGGCGAATTCACTGAACACAACGTTATTTACTCCTGGGAGCTTAGTTCAACGTTGAATTCCGATGCTACGGATAATTCCTCCGGTGGGGACGGGAACGGGAAACGAAACGTTTGGGTAATTGCTGTGGCGACTTGTTCAGCAGTCTTGGTGGCCGTGGTTGCGAGTGTTGCAGTCTGGGCAATGATCATGAAGAAAAGAAGGGATAAGGTTGACAAGAGTAATGATGGTGAAGGTGGAGCCAACTTGGTTAAGTTTGATTTGGATAGGGCAACTATACCAAGAAGATTTGATTACAAAGAACTACTTGCAGCCACCAACGGATTCGCAGATGATAGAAAGCTTGGACGAGGAGGCTCGGGACAGGTTTACAAAGGTGTTCTGAATGATTTGGGAAGGGTTGTTGCGGTGAAAAGGATTTTCGCCAAGTTTGCAAATTCAGAGAGAGTTTTCATCAATGAGGTTAGGGTTATAAGCCGTCTTATACACAGAAACCTGGTGCAGTTCGTAGGTTGGTGCCACGAGCAAGGTGAGTTTCTGTTGCTTTTTGAGTACATGCCTAATGGAAGCCTCGACACTCATCTCTTTGGGGACAAAAAACCATTGACCTGGGATGTTAGGTATAAGGTAGCATTAGGAGTGGCTGCAGCAGTTCGTTATCTTCACGAGGATGCAGAGCAGTGTGTTCTTCACAGGGATATTAAGTCAGCAAATGTGTTGTTGGACACAGATTTTAGCACCAAGCTTGGGGATTTTGGAATGGCAAAGTTTGTGGATCCGAGGTTGAGGACTCAAATGACAGGGGTGGTGGGGACTTTCGGGTACCTTGCCCCAGAATACATCAACGGACGTAGGGCTAGTAAGGAATCAGACATTTATAGTTTCGGGGTTGTGGCTCTTGAGATCGCATGTGGAAGGAGGACTTACCATGATGGAGAGTTTCATGTGCCTCTGATGAACTGGGTGTGGCAGCAGTATGTGAAGGGGAATGTGATGGATGTTGTTGATGAGAGATTGAACAAGGAGTTTAATGTGGATGAAATGAGAAGCTTGATCGTTGTAGGGTTGTGGTGTACTAACCCTAACGACAAGGAAAGGCCAAAGGCTGCACAAGTGATAAAAGTTCTTGAGCTAGAAGCGCCATTGCCAGAGCTTCCACTTGATATGCATGACCGTTTTCCTCCTTCTCTAGTTACATATTCAGAACAACCTAATTTTCAGTCCATTCAGACACTACCTTTCACCGACAGCTTTATAAGTGTTGGACGTTAG 2001 0.4583 MRMRLLEMVTTFVLVLVLHPPFLKTVESLNFNITNFNDPESEQNMAYIGDGKASNGSVELNIVDYLFRVGRALYAKPMHLWDQSSNVLTDFTTRFTFSIDRAKNGTYADGFAFYMAPHGYPIPPNSGGGTFALFNTTSNTFIPHNHVLAVEFDTFNGTIDPPMQHVGIDDNSLSSVTYAKFDIDKNLGKKCNVLITYSASNKTLFVAWSFNGTATSHSNSSLSYKIDLMEILPEWVDVGFSASTGEFTEHNVIYSWELSSTLNSDATDNSSGGDGNGKRNVWVIAVATCSAVLVAVVASVAVWAMIMKKRRDKVDKSNDGEGGANLVKFDLDRATIPRRFDYKELLAATNGFADDRKLGRGGSGQVYKGVLNDLGRVVAVKRIFAKFANSERVFINEVRVISRLIHRNLVQFVGWCHEQGEFLLLFEYMPNGSLDTHLFGDKKPLTWDVRYKVALGVAAAVRYLHEDAEQCVLHRDIKSANVLLDTDFSTKLGDFGMAKFVDPRLRTQMTGVVGTFGYLAPEYINGRRASKESDIYSFGVVALEIACGRRTYHDGEFHVPLMNWVWQQYVKGNVMDVVDERLNKEFNVDEMRSLIVVGLWCTNPNDKERPKAAQVIKVLELEAPLPELPLDMHDRFPPSLVTYSEQPNFQSIQTLPFTDSFISVGR 666
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun8g00594 666 FunFam L-type lectin-domain containing receptor kinase IX.1 27 276 - -
Viun8g00594 666 Gene3D Transferase(Phosphotransferase) domain 1 429 634 - -
Viun8g00594 666 CDD lectin_legume_LecRK_Arcelin_ConA 29 262 IPR001220 GO:0030246
Viun8g00594 666 ProSitePatterns Legume lectins alpha-chain signature. 232 241 IPR000985 -
Viun8g00594 666 ProSitePatterns Legume lectins beta-chain signature. 148 154 IPR019825 -
Viun8g00594 666 Pfam Protein kinase domain 353 617 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun8g00594 666 PANTHER - 59 624 - -
Viun8g00594 666 ProSitePatterns Protein kinases ATP-binding region signature. 358 381 IPR017441 GO:0005524
Viun8g00594 666 Pfam Legume lectin domain 28 269 IPR001220 GO:0030246
Viun8g00594 666 SMART serkin_6 352 625 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun8g00594 666 ProSitePatterns Serine/Threonine protein kinases active-site signature. 472 484 IPR008271 GO:0004672|GO:0006468
Viun8g00594 666 CDD STKc_IRAK 358 620 - -
Viun8g00594 666 ProSiteProfiles Protein kinase domain profile. 352 636 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun8g00594 666 SUPERFAMILY Protein kinase-like (PK-like) 336 653 IPR011009 -
Viun8g00594 666 FunFam L-type lectin-domain containing receptor kinase IX.1 337 428 - -
Viun8g00594 666 FunFam L-type lectin-domain containing receptor kinase IX.1 429 629 - -
Viun8g00594 666 SUPERFAMILY Concanavalin A-like lectins/glucanases 27 268 IPR013320 -
Viun8g00594 666 Gene3D - 26 273 - -
Viun8g00594 666 Gene3D Phosphorylase Kinase; domain 1 337 428 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun8g00594 Viun-Chr8 4445069 4447622 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun8g00594 8 632 Receptor kinase-like Gene Family AT5G10530 45.055 4.09e-178 520
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Viun8g00594 Pkinase 2.3e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun8g00594 - - vra:106763732 1170.61