Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun8g00588 ATGACAGACAACAATCCAAAACCACCACCTGATACACCCGACAGTGATGATTTCTGCAACCAGTGGCCTTTTGAGCTCTCTGAGTACTTGCAATTCGATGATAACCAGTGGATGCAGGATGATATCCCGTCTTTTTCTTCTGAGAATGTCTCAAACCAGGTTCATCAAGCCAGTAATGGAAGCTACTTTGAAGGGTCTTCTAGCAGAGATACTGGTGAACGTGAGAATCGGCAAGTTGTTAGAGAGAGATTTGCATTCAAAACAATTTCTGAGATTGAAGTGCTAGATGATGGATACAGATGGAGGAAGTACGGAAAGAAAATGGTGAAGAACAATCCCAATCCAAGGAATTACTATAGATGTTCAGTGGATGGGTGCGCTGTGAAGAAGAGAGTGGAGAGAGATAAAGATGACCCTAGGTGTGTAATAACAACCTACGAAGGCAACCACACTCATCCAAGTTCTTCCTAG 471 0.431 MTDNNPKPPPDTPDSDDFCNQWPFELSEYLQFDDNQWMQDDIPSFSSENVSNQVHQASNGSYFEGSSSRDTGERENRQVVRERFAFKTISEIEVLDDGYRWRKYGKKMVKNNPNPRNYYRCSVDGCAVKKRVERDKDDPRCVITTYEGNHTHPSSS 156
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun8g00588 156 Gene3D WRKY domain 82 148 IPR036576 GO:0003700|GO:0006355|GO:0043565
Viun8g00588 156 SMART WRKY_cls 95 154 IPR003657 GO:0003700|GO:0006355|GO:0043565
Viun8g00588 156 MobiDBLite consensus disorder prediction 40 67 - -
Viun8g00588 156 ProSiteProfiles WRKY domain profile. 90 155 IPR003657 GO:0003700|GO:0006355|GO:0043565
Viun8g00588 156 MobiDBLite consensus disorder prediction 40 77 - -
Viun8g00588 156 Pfam WRKY DNA -binding domain 96 153 IPR003657 GO:0003700|GO:0006355|GO:0043565
Viun8g00588 156 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 4 154 IPR044810 GO:0003700
Viun8g00588 156 FunFam WRKY transcription factor 57 81 155 - -
Viun8g00588 156 SUPERFAMILY WRKY DNA-binding domain 88 154 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun8g00588 Viun-Chr8 4384965 4386270 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun8g00588 24 154 WRKY Transcription Factor Family AT5G26170 50.649 4.87e-41 134
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Viun8g00588 WRKY 6.7e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun8g00588 - - gmx:100796836 260.381
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun8g00588 8 4384965 4386270 Viun8g00588 8 4384965 4386270 ECH