Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun8g00559 ATGGATATTGTTGGCATTAGTCACGAGGATCAGGAAGCCATATTTCGTGTCTTAGCAGCAATTTTACATTTGGGAAACGTCGAATTTTCACCTGGAAAAGAGCATGACTCATCGGCAGTAAAGAACGACAAATCAAGATTTCATATGCAGATGGCTGCTGATCTTTTCATGTGTGATGTAGACCTACTGCTGGCAACATTGTGTACTCGTTCAATACAAACTCGTGAAGGAAGTATTGTCAAGGCCCTTGATTGCAATGCGGCTGTTGCTGGGCGTGATGCTTTGGCGAAAACTGTTTATGCCCGTTTGTTTGATTGGCTTGTTGATAAGATCAATATGTCTGTTGGGCAAGACATCAATTCGAAGATACAAATTGGAGTTTTGGATATTTATGGTTTTGAGTGCTTTAAGGATAACAGTTTTGAGCAATTTTGCATTAATTTTGCAAATGAAAAGCTTCAGCAACATTTTAATGAGCATGTGTTCAAGATGGAACAGGAGGAGTATGGCAAAGAAGAAATTAACTGGAGTTACATTGAATTTGTAGATAACCAAGATGTTTTAGATTTAATTGAAAAGAAACCTATTGGTATCATTGCTCTGTTGGATGAAGCTTGTATGTTTCCAAAGTCGACTCATGAAACATTCTCAACCAAGTTGTTTCAGCATTTCCGATCTCACCCTAGGTTGGGAAAGGAAAAGTTTTCGCAAACAGATTTTACTATTTCTCATTATGCTGGAAAGGTCACGTATCATACAGACACCTTTTTAGACAAAAATCGTGATTATGTTGTAGTAGAACATTGCAATCTCTTATCTTCTTCAAAATGCCTTTTCGTTTCTGGTCTATTTCCTTTGCTATCTGAAGAATCTTCAAGATCATCATACAAGTTTTCTTCAGTAGCTGCTAGATTTAAGCAACAACTTCAAGCACTCATGGAGACCCTAAACTCAACAGAGCCTCACTACATACGATGTGTGAAACCAAATTCTTTGAATCGACCTCAACTATTTGAAAATGCAAGTGTCATACACCAGTTACGCTGTGGGGGTGTCCTTGAGGCTGTTCGGATAAGTCTGGCAGGTTATCCCACTCGAAGAACTTACTCAGAGTTTGTGGATCGTTTTGGGTTGATAGCCCCTGAATTTATGGATGGAAGTTATGATGATAAAGCTGCAACTGAAAAAATTTTGCAAAAGCTTAAGCTTGAGAATTTTCAGTTGGGTAGGACCAAAGTATTTCTCAGGGCTGGCCAAATAGGTATTTTAGACCAAAGACGTGCTGAAGTTTTAGACAATGCTGCAAAGTGTATCCAGCGCCGCATGAGGACATTTATTGCACATCAGGATTTTATATTTTTAAGATCTGCTGCGATTTCTCTTCAGGCATGCTGCAGGGGTCGCATTGCCAGAAAGATATATGCTGCTAAAAGGGAGACAGCAGCGGCTATCTCCATTCAGAAATATATTCGGATGTGGTTTACAAGGCATGCTCACCTAAAATTGTATTTTTCTGCTATTATCATTCAATCTCATGTTCGAGGTTTTGTGACTCGCCAAAGATTCTTACATGTAAAAGAACATAGAGCTGCTACTCTTGTTCAGGCCTATTGGAGGATGTCCAAGGTTAGGTCATCTTTCTTACGATATCAAACTTCAATTGTTGCAATACAATGCCTTTGGCGGTGCAGACAAGCAAAAAGAGAGTTGCGGAGACTTAAACAAGAGGCAAATGAAGCTGGTGCTCTTCGTTTAGCAAAGAATAAACTGGAGAAGCAAATGGAGGATCTCACATGGCGTTTGCATCTTGAAAAGAAAATAAGGGTTTCTAATGAAGAGGCTAAAAAAATAGAGATTTCCAAACTTCAAAAGATGTTAGAAGCTTTGAATCTTGAATTAGATGCTGCTAAATTGGCAAACATTAATGAGTGCAACAAGAATGCTGTTCTGCAAAATCAATTAGAATTGTCAGTAAAGGAAAAGTCTGCTTTGAAACGGGACCTAGTAGCAGTGGATGAATTGCGAAAGGAAAATGCTTTATTAAAGGTTTCATTGGATGCATTTGAAAGGAAGTACAGGACCTTAGAGCTTGAGCTTATGAATGCTCAGAAAGGCCGGGATGAAACCATGGAGAAACTGAGGGAGTTTGAACATAAGTGTTCTCAACTCGAGCAAAATGAAAAAAAGCTTGAGGAAAAGTTAAAGAGTTTAGAAAATGAAAATCATGTGCTTCGTCAGAAAGCCTTAAGTACCCCTCTTAAGAGTAACCGCCCAGGTTTTGCCAAGTCAGTGTCAGAAAAATACTCAAGTGCGATTACCTCTCGCACTGATCGAAAGACCATATTTGAGTCACCCACACCCACAAAACTTATTGCTCCTTTTACACTAGGCTTGTCAGACTCTCGTCGATCTAAGCTAACAGCAGAGAAACACCAGGATAACTATGAATTCCTCTCCAAGTGTATAAAAGAAAATTTGGGATTTAAAAATGGTAAACCTATTGCTGCTCGTATTATATATAAATGTCTGCTTCATTGGCATTCATTTGAAAATGAGCGCACAACCATTTTTGATTCAATCATCGAAGGCATAAATGAGATTCTAAAGGTTAGGGAGGATGACATTATCCTGCCATATTGGCTGTCCAATACCTCTGCGCTTCTATGCCTTTTACAGAGGAACTTACGGTCAAATGGTTTTTTAACTGCCACTGCTCAGCGTTATCCTGGATCATCTGGTTTAATCAGCCGGACTGGACATGGATCAAAATCTCCGTTGCAGTTTATTGGGTATGATGATGGTGTGTCACATGTGGAGGCAAGATATCCTGCTATACTTTTTAAACAACAGCTAACTGCTTGTGTAGAGAAGATTTTTGGTCTGTTGCGTGACAATTTGAAAAAAGAACTCTCTCCACTGCTGGGATCATGTATTCAGTCACCCAAAACAGGACGAGGAGTGCAAGGGGCAAAATCGTCTAGGTCTCCTGGTGGGATTCAACAATCATCTGGTGGTCAGTGGGATAACATTGTCAAATTTTTGGATTCTCTCATGAGCAAACTATGTGGAAATCATGTGCCATCCTTCTTCATCCGTAAACTAGTTACCCAGGTGTTTTCCTTCATCAATATTACACTCTTCAACAGTCTTCTTTTGCGTCGGGAATGTTGCACTTTCTCAAATGGTGAATATGTGAAGTCTGGTCTAGCAGAACTGGAGAAATGGATAGTGAATGCAAAGGAAGAGTATGCAGGGACATCCTGGCATGAGCTCAATTACATACGGCAAGCTGTTGGGTTCTTGGTAATACATCAGAAAAGAAAGAAATCTTTAATTGAAATTCGGCAAGATCTTTGTCCGGCATTGACAGTGAGGCAAATCTATCGAATCAGTACAATGTACTGGGATGACAAGTATAGAACCCAAAGTGTGTCCAATGAGGTGGTTGGTGAAATGAGAGAAATTGTCAGCAAGGACAATCAGAACCTGACCTCAAATTCTTTCCTATTGGATGATGATCTGAGCATTCCTTTCTCTGCCGAAGACATAGATATGGCTATCCCTGCCATAGATCTTGATGAGATTCATCTTCCAGAATTCGTGTCCGAATATTCCTGTGCTCAGTTTCTTATTTCAGATCAGAAGTAA 3648 0.3967 MDIVGISHEDQEAIFRVLAAILHLGNVEFSPGKEHDSSAVKNDKSRFHMQMAADLFMCDVDLLLATLCTRSIQTREGSIVKALDCNAAVAGRDALAKTVYARLFDWLVDKINMSVGQDINSKIQIGVLDIYGFECFKDNSFEQFCINFANEKLQQHFNEHVFKMEQEEYGKEEINWSYIEFVDNQDVLDLIEKKPIGIIALLDEACMFPKSTHETFSTKLFQHFRSHPRLGKEKFSQTDFTISHYAGKVTYHTDTFLDKNRDYVVVEHCNLLSSSKCLFVSGLFPLLSEESSRSSYKFSSVAARFKQQLQALMETLNSTEPHYIRCVKPNSLNRPQLFENASVIHQLRCGGVLEAVRISLAGYPTRRTYSEFVDRFGLIAPEFMDGSYDDKAATEKILQKLKLENFQLGRTKVFLRAGQIGILDQRRAEVLDNAAKCIQRRMRTFIAHQDFIFLRSAAISLQACCRGRIARKIYAAKRETAAAISIQKYIRMWFTRHAHLKLYFSAIIIQSHVRGFVTRQRFLHVKEHRAATLVQAYWRMSKVRSSFLRYQTSIVAIQCLWRCRQAKRELRRLKQEANEAGALRLAKNKLEKQMEDLTWRLHLEKKIRVSNEEAKKIEISKLQKMLEALNLELDAAKLANINECNKNAVLQNQLELSVKEKSALKRDLVAVDELRKENALLKVSLDAFERKYRTLELELMNAQKGRDETMEKLREFEHKCSQLEQNEKKLEEKLKSLENENHVLRQKALSTPLKSNRPGFAKSVSEKYSSAITSRTDRKTIFESPTPTKLIAPFTLGLSDSRRSKLTAEKHQDNYEFLSKCIKENLGFKNGKPIAARIIYKCLLHWHSFENERTTIFDSIIEGINEILKVREDDIILPYWLSNTSALLCLLQRNLRSNGFLTATAQRYPGSSGLISRTGHGSKSPLQFIGYDDGVSHVEARYPAILFKQQLTACVEKIFGLLRDNLKKELSPLLGSCIQSPKTGRGVQGAKSSRSPGGIQQSSGGQWDNIVKFLDSLMSKLCGNHVPSFFIRKLVTQVFSFINITLFNSLLLRRECCTFSNGEYVKSGLAELEKWIVNAKEEYAGTSWHELNYIRQAVGFLVIHQKRKKSLIEIRQDLCPALTVRQIYRISTMYWDDKYRTQSVSNEVVGEMREIVSKDNQNLTSNSFLLDDDLSIPFSAEDIDMAIPAIDLDEIHLPEFVSEYSCAQFLISDQK 1215
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun8g00559 1215 Pfam Myosin head (motor domain) 1 416 IPR001609 GO:0003774|GO:0005524|GO:0016459
Viun8g00559 1215 ProSiteProfiles IQ motif profile. 454 483 IPR000048 GO:0005515
Viun8g00559 1215 ProSiteProfiles Dilute domain profile. 858 1158 IPR002710 -
Viun8g00559 1215 ProSiteProfiles Myosin motor domain profile. 1 428 IPR001609 GO:0003774|GO:0005524|GO:0016459
Viun8g00559 1215 ProSiteProfiles IQ motif profile. 505 531 IPR000048 GO:0005515
Viun8g00559 1215 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 478 526 IPR027417 -
Viun8g00559 1215 SMART iq_5 478 500 IPR000048 GO:0005515
Viun8g00559 1215 SMART iq_5 453 475 IPR000048 GO:0005515
Viun8g00559 1215 SMART iq_5 526 548 IPR000048 GO:0005515
Viun8g00559 1215 SMART iq_5 430 452 IPR000048 GO:0005515
Viun8g00559 1215 SMART iq_5 501 523 IPR000048 GO:0005515
Viun8g00559 1215 SMART iq_5 549 571 IPR000048 GO:0005515
Viun8g00559 1215 PANTHER MYOSIN 1 496 - -
Viun8g00559 1215 MobiDBLite consensus disorder prediction 981 1003 - -
Viun8g00559 1215 Coils Coil 563 593 - -
Viun8g00559 1215 CDD MyosinXI_CBD 809 1181 IPR037975 GO:0007015
Viun8g00559 1215 Gene3D Kinesin motor domain 287 362 IPR036961 -
Viun8g00559 1215 ProSiteProfiles IQ motif profile. 550 579 IPR000048 GO:0005515
Viun8g00559 1215 Coils Coil 671 747 - -
Viun8g00559 1215 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 526 577 IPR027417 -
Viun8g00559 1215 Gene3D - 363 429 - -
Viun8g00559 1215 Coils Coil 612 639 - -
Viun8g00559 1215 Gene3D - 141 285 - -
Viun8g00559 1215 Gene3D - 430 480 - -
Viun8g00559 1215 Gene3D - 529 578 - -
Viun8g00559 1215 Gene3D - 481 528 - -
Viun8g00559 1215 Gene3D Myosin VI head, motor domain, U50 subdomain 7 140 - -
Viun8g00559 1215 SMART DIL_2 1033 1140 IPR002710 -
Viun8g00559 1215 PRINTS Myosin heavy chain signature 177 205 IPR001609 GO:0003774|GO:0005524|GO:0016459
Viun8g00559 1215 PRINTS Myosin heavy chain signature 124 152 IPR001609 GO:0003774|GO:0005524|GO:0016459
Viun8g00559 1215 Pfam IQ calmodulin-binding motif 528 547 IPR000048 GO:0005515
Viun8g00559 1215 Pfam IQ calmodulin-binding motif 480 498 IPR000048 GO:0005515
Viun8g00559 1215 Pfam IQ calmodulin-binding motif 455 474 IPR000048 GO:0005515
Viun8g00559 1215 Pfam IQ calmodulin-binding motif 505 522 IPR000048 GO:0005515
Viun8g00559 1215 SMART MYSc_2a 1 429 IPR001609 GO:0003774|GO:0005524|GO:0016459
Viun8g00559 1215 Pfam DIL domain 1034 1137 IPR002710 -
Viun8g00559 1215 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1 477 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun8g00559 Viun-Chr8 3979181 4002009 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun8g00559 1 1211 Myosins gene family AT4G33200 71.370 0.0 1758
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun8g00559 K10357 - gmx:100790815 2196.01