Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun8g00558 ATGTTTTTGCTGTCGCTGATGCATCATACAGGTAAAAGTCAATCTATCTTGGTTAGCGGCGAAAGTGGTGCTGGAAAAACTGAGACAACAAAATTGATCATGCAGTATCTTACCTTTGTTGGTGGACGTGCTGGTGGTGATGATAGAACAGTTGAACAACAAGTTCTTGAATCCAATCCACTTTTAGAGGCGTTTGGTAATGCAAGGACTGTTAGGAATGACAATTCAAGTCGTTTTGGGAAGTTTGTTGAAATTCAGTTTGATTCAAATGGTAGAATATCTGGTGCTGCAATTAGAACTTACTTACTGGAAAGGTCAAGAGTAGTGCAGATAACGGATCCAGAGAGAAATTATCACTGCTTTTATCAGTTGTGTTCATTTGAAAGGGATGCAGAGAAGTATAAGTTAGGACATCCGAGTCACTTCCACTATCTAAATCAAAGTAAAATCTATGAATTAGATGGTGTAAGCAACTCAGAAGAATACCTGAAGACAAGGAGGGCAATGGATATTGTTGGCATTAGTCACGAGGATCAGGAAGCCATATTTCGTGTCTTAGCAGCAATTTTACATTTGGGAAACGTCGAATTTTCACCTGGAAAAGAGCATGACTCATCGGCAGTAAAGAACGACAAATCAAGATTTCATATGCAGATGGCTGCTGATCTTTTCATGTGTGATGTAGACCTACTGCTGGCAACATTGTGTACTCGTTCAATACAAACTCGTGAAGGAAGTATTGTCAAGGCCCTTGATTGCAATGCGGCTGTTGCTGGGCGTGATGCTTTGGCGAAAACTGTTTATGCCCGTTTGTTTGATTGGCTTGTTGATAAGATCAATATGTCTGTTGGGCAAGACATCAATTCGAAGATACAAATTGGAGTTTTGGATATTTATGGTTTTGAGTGCTTTAAGGATAACAGTTTTGAGCAATTTTGCATTAATTTTGCAAATGAAAAGCTTCAGCAACATTTTAATGAGCATGTGTTCAAGATGGAACAGGAGGAGTATGGCAAAGAAGAAATTAACTGGAGTTACATTGAATTTGTAGATAACCAAGATGTTTTAGATTTAATTGAAAAGAAACCTATTGGTATCATTGCTCTGTTGGATGAAGCTTGTATGTTTCCAAAGTCGACTCATGAAACATTCTCAACCAAGTTGTTTCAGCATTTCCGATCTCACCCTAGGTTGGGAAAGGAAAAGTTTTCGCAAACAGATTTTACTATTTCTCATTATGCTGGAAAGGTCACGTATCATACAGACACCTTTTTAGACAAAAATCGTGATTATGTTGTAGTAGAACATTGCAATCTCTTATCTTCTTCAAAATGCCTTTTCGTTTCTGGTCTATTTCCTTTGCTATCTGAAGAATCTTCAAGATCATCATACAAGTTTTCTTCAGTAGCTGCTAGATTTAAGCAACAACTTCAAGCACTCATGGAGACCCTAAACTCAACAGAGCCTCACTACATACGATGTGTGAAACCAAATTCTTTGAATCGACCTCAACTATTTGAAAATGCAAGTGTCATACACCAGTTACGCTGTGGGGGTGTCCTTGAGGCTGTTCGGATAAGTCTGGCAGGTTATCCCACTCGAAGAACTTACTCAGAGTTTGTGGATCGTTTTGGGTTGATAGCCCCTGAATTTATGGATGGAAGTTATGATGATAAAGCTGCAACTGAAAAAATTTTGCAAAAGCTTAAGCTTGAGAATTTTCAGTTGGGTAGGACCAAAGTATTTCTCAGGGCTGGCCAAATAGGTATTTTAGACCAAAGACGTGCTGAAGTTTTAGACAATGCTGCAAAGTGTATCCAGCGCCGCATGAGGACATTTATTGCACATCAGGATTTTATATTTTTAAGATCTGCTGCGATTTCTCTTCAGGCATGCTGCAGGGGTCGCATTGCCAGAAAGATATATGCTGCTAAAAGGGAGACAGCAGCGGCTATCTCCATTCAGAAATATATTCGGATGTGGTTTACAAGGCATGCTCACCTAAAATTGTATTTTTCTGCTATTATCATTCAATCTCATGTTCGAGGTTTTGTGACTCGCCAAAGATTCTTACATGTAAAAGAACATAGAGCTGCTACTCTTGTTCAGGCCTATTGGAGGATGTCCAAGGTTAGGTCATCTTTCTTACGATATCAAACTTCAATTGTTGCAATACAATGCCTTTGGCGGTGCAGACAAGCAAAAAGAGAGTTGCGGAGACTTAAACAAGAGGCAAATGAAGCTGGTGCTCTTCGTTTAGCAAAGAATAAACTGGAGAAGCAAATGGAGGATCTCACATGGCGTTTGCATCTTGAAAAGAAAATAAGGGTTTCTAATGAAGAGGCTAAAAAAATAGAGATTTCCAAACTTCAAAAGATGTTAGAAGCTTTGAATCTTGAATTAGATGCTGCTAAATTGGCAAACATTAATGAGTGCAACAAGAATGCTGTTCTGCAAAATCAATTAGAATTGTCAGTAAAGGAAAAGTCTGCTTTGAAACGGGACCTAGTAGCAGTGGATGAATTGCGAAAGGAAAATGCTTTATTAAAGGTTTCATTGGATGCATTTGAAAGGAAGTACAGGACCTTAGAGCTTGAGCTTATGAATGCTCAGAAAGGCCGGGATGAAACCATGGAGAAACTGAGGGAGTTTGAACATAAGTGTTCTCAACTCGAGCAAAATGAAAAAAAGCTTGAGGAAAAGTTAAAGAGTTTAGAAAATGAAAATCATGTGCTTCGTCAGAAAGCCTTAAGTACCCCTCTTAAGAGTAACCGCCCAGGTTTTGCCAAGTCAGTGTCAGAAAAATACTCAAGTGCGATTACCTCTCGCACTGATCGAAAGACCATATTTGAGTCACCCACACCCACAAAACTTATTGCTCCTTTTACACTAGGCTTGTCAGACTCTCGTCGATCTAAGCTAACAGCAGAGAAACACCAGGATAACTATGAATTCCTCTCCAAGTGTATAAAAGAAAATTTGGGATTTAAAAATGGTAAACCTATTGCTGCTCGTATTATATATAAATGTCTGCTTCATTGGCATTCATTTGAAAATGAGCGCACAACCATTTTTGATTCAATCATCGAAGGCATAAATGAGATTCTAAAGGTTAGGGAGGATGACATTATCCTGCCATATTGGCTGTCCAATACCTCTGCGCTTCTATGCCTTTTACAGAGGAACTTACGGTCAAATGGTTTTTTAACTGCCACTGCTCAGCGTTATCCTGGATCATCTGGTTTAATCAGCCGGACTGGACATGGATCAAAATCTCCGTTGCAGTTTATTGGGTATGATGATGGTGTGTCACATGTGGAGGCAAGATATCCTGCTATACTTTTTAAACAACAGCTAACTGCTTGTGTAGAGAAGATTTTTGGTCTGTTGCGTGACAATTTGAAAAAAGAACTCTCTCCACTGCTGGGATCATGTATTCAGTCACCCAAAACAGGACGAGGAGTGCAAGGGGCAAAATCGTCTAGGTCTCCTGGTGGGATTCAACAATCATCTGGTGGTCAGTGGGATAACATTGTCAAATTTTTGGATTCTCTCATGAGCAAACTATGTGGAAATCATGTGCCATCCTTCTTCATCCGTAAACTAGTTACCCAGGTGTTTTCCTTCATCAATATTACACTCTTCAACAGTCTTCTTTTGCGTCGGGAATGTTGCACTTTCTCAAATGGTGAATATGTGAAGTCTGGTCTAGCAGAACTGGAGAAATGGATAGTGAATGCAAAGGAAGAGTATGCAGGGACATCCTGGCATGAGCTCAATTACATACGGCAAGCTGTTGGGTTCTTGGTAATACATCAGAAAAGAAAGAAATCTTTAATTGAAATTCGGCAAGATCTTTGTCCGGCATTGACAGTGAGGCAAATCTATCGAATCAGTACAATGTACTGGGATGACAAGTATAGAACCCAAAGTGTGTCCAATGAGGTGGTTGGTGAAATGAGAGAAATTGTCAGCAAGGACAATCAGAACCTGACCTCAAATTCTTTCCTATTGGATGATGATCTGAGCATTCCTTTCTCTGCCGAAGACATAGATATGGCTATCCCTGCCATAGATCTTGATGAGATTCATCTTCCAGAATTCGTGTCCGAATATTCCTGTGCTCAGTTTCTTATTTCAGATCAGAAGTAA 4152 0.3957 MFLLSLMHHTGKSQSILVSGESGAGKTETTKLIMQYLTFVGGRAGGDDRTVEQQVLESNPLLEAFGNARTVRNDNSSRFGKFVEIQFDSNGRISGAAIRTYLLERSRVVQITDPERNYHCFYQLCSFERDAEKYKLGHPSHFHYLNQSKIYELDGVSNSEEYLKTRRAMDIVGISHEDQEAIFRVLAAILHLGNVEFSPGKEHDSSAVKNDKSRFHMQMAADLFMCDVDLLLATLCTRSIQTREGSIVKALDCNAAVAGRDALAKTVYARLFDWLVDKINMSVGQDINSKIQIGVLDIYGFECFKDNSFEQFCINFANEKLQQHFNEHVFKMEQEEYGKEEINWSYIEFVDNQDVLDLIEKKPIGIIALLDEACMFPKSTHETFSTKLFQHFRSHPRLGKEKFSQTDFTISHYAGKVTYHTDTFLDKNRDYVVVEHCNLLSSSKCLFVSGLFPLLSEESSRSSYKFSSVAARFKQQLQALMETLNSTEPHYIRCVKPNSLNRPQLFENASVIHQLRCGGVLEAVRISLAGYPTRRTYSEFVDRFGLIAPEFMDGSYDDKAATEKILQKLKLENFQLGRTKVFLRAGQIGILDQRRAEVLDNAAKCIQRRMRTFIAHQDFIFLRSAAISLQACCRGRIARKIYAAKRETAAAISIQKYIRMWFTRHAHLKLYFSAIIIQSHVRGFVTRQRFLHVKEHRAATLVQAYWRMSKVRSSFLRYQTSIVAIQCLWRCRQAKRELRRLKQEANEAGALRLAKNKLEKQMEDLTWRLHLEKKIRVSNEEAKKIEISKLQKMLEALNLELDAAKLANINECNKNAVLQNQLELSVKEKSALKRDLVAVDELRKENALLKVSLDAFERKYRTLELELMNAQKGRDETMEKLREFEHKCSQLEQNEKKLEEKLKSLENENHVLRQKALSTPLKSNRPGFAKSVSEKYSSAITSRTDRKTIFESPTPTKLIAPFTLGLSDSRRSKLTAEKHQDNYEFLSKCIKENLGFKNGKPIAARIIYKCLLHWHSFENERTTIFDSIIEGINEILKVREDDIILPYWLSNTSALLCLLQRNLRSNGFLTATAQRYPGSSGLISRTGHGSKSPLQFIGYDDGVSHVEARYPAILFKQQLTACVEKIFGLLRDNLKKELSPLLGSCIQSPKTGRGVQGAKSSRSPGGIQQSSGGQWDNIVKFLDSLMSKLCGNHVPSFFIRKLVTQVFSFINITLFNSLLLRRECCTFSNGEYVKSGLAELEKWIVNAKEEYAGTSWHELNYIRQAVGFLVIHQKRKKSLIEIRQDLCPALTVRQIYRISTMYWDDKYRTQSVSNEVVGEMREIVSKDNQNLTSNSFLLDDDLSIPFSAEDIDMAIPAIDLDEIHLPEFVSEYSCAQFLISDQK 1383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun8g00558 1383 ProSiteProfiles IQ motif profile. 718 747 IPR000048 GO:0005515
Viun8g00558 1383 FunFam Myosin heavy chain 116 170 - -
Viun8g00558 1383 Pfam IQ calmodulin-binding motif 696 715 IPR000048 GO:0005515
Viun8g00558 1383 Pfam IQ calmodulin-binding motif 648 666 IPR000048 GO:0005515
Viun8g00558 1383 Pfam IQ calmodulin-binding motif 673 690 IPR000048 GO:0005515
Viun8g00558 1383 Pfam IQ calmodulin-binding motif 623 642 IPR000048 GO:0005515
Viun8g00558 1383 Gene3D Myosin VI head, motor domain, U50 subdomain 175 465 - -
Viun8g00558 1383 MobiDBLite consensus disorder prediction 1149 1171 - -
Viun8g00558 1383 Coils Coil 731 761 - -
Viun8g00558 1383 CDD MyosinXI_CBD 977 1349 IPR037975 GO:0007015
Viun8g00558 1383 Gene3D - 531 597 - -
Viun8g00558 1383 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 646 694 IPR027417 -
Viun8g00558 1383 SMART iq_5 646 668 IPR000048 GO:0005515
Viun8g00558 1383 SMART iq_5 621 643 IPR000048 GO:0005515
Viun8g00558 1383 SMART iq_5 694 716 IPR000048 GO:0005515
Viun8g00558 1383 SMART iq_5 598 620 IPR000048 GO:0005515
Viun8g00558 1383 SMART iq_5 669 691 IPR000048 GO:0005515
Viun8g00558 1383 SMART iq_5 717 739 IPR000048 GO:0005515
Viun8g00558 1383 SMART DIL_2 1201 1308 IPR002710 -
Viun8g00558 1383 ProSiteProfiles IQ motif profile. 622 651 IPR000048 GO:0005515
Viun8g00558 1383 Coils Coil 780 807 - -
Viun8g00558 1383 Gene3D - 302 487 - -
Viun8g00558 1383 Pfam DIL domain 1202 1305 IPR002710 -
Viun8g00558 1383 SMART MYSc_2a 2 597 IPR001609 GO:0003774|GO:0005524|GO:0016459
Viun8g00558 1383 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 7 645 IPR027417 -
Viun8g00558 1383 ProSiteProfiles Myosin motor domain profile. 1 596 IPR001609 GO:0003774|GO:0005524|GO:0016459
Viun8g00558 1383 Gene3D Kinesin motor domain 7 526 IPR036961 -
Viun8g00558 1383 ProSiteProfiles IQ motif profile. 673 699 IPR000048 GO:0005515
Viun8g00558 1383 Coils Coil 839 915 - -
Viun8g00558 1383 CDD MYSc_Myo11 7 584 IPR036018 -
Viun8g00558 1383 ProSiteProfiles Dilute domain profile. 1026 1326 IPR002710 -
Viun8g00558 1383 Pfam Myosin head (motor domain) 7 584 IPR001609 GO:0003774|GO:0005524|GO:0016459
Viun8g00558 1383 Gene3D - 598 648 - -
Viun8g00558 1383 Gene3D - 649 697 - -
Viun8g00558 1383 Gene3D - 698 746 - -
Viun8g00558 1383 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 690 750 IPR027417 -
Viun8g00558 1383 PANTHER MYOSIN 672 1315 - -
Viun8g00558 1383 PRINTS Myosin heavy chain signature 345 373 IPR001609 GO:0003774|GO:0005524|GO:0016459
Viun8g00558 1383 PRINTS Myosin heavy chain signature 13 38 IPR001609 GO:0003774|GO:0005524|GO:0016459
Viun8g00558 1383 PRINTS Myosin heavy chain signature 292 320 IPR001609 GO:0003774|GO:0005524|GO:0016459
Viun8g00558 1383 PRINTS Myosin heavy chain signature 60 87 IPR001609 GO:0003774|GO:0005524|GO:0016459
Viun8g00558 1383 Gene3D - 116 173 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun8g00558 Viun-Chr8 3979181 4006079 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun8g00558 7 1379 Myosins gene family AT4G33200 72.926 0.0 2043
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun8g00558 K10357 - gmx:100790815 2499.16