Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun8g00535 ATGGTGTTCATGCAATTGTTAGGAGCCATGATCATCCTCCTCCTGCCTTTGTTAGGAGCCTTATTGGGTTATCTTTATGGGCCCTATTGGGGGCTCAGGAAAGTCCCAGGCCCACCATCTCTGCCTCTTCTAGGGCACCTTCACTTGCTGGCCAAATATGGCCCTGATGTTTTCTCACTCCTTGCCGACCAATATGGCCCAATTTACAGATTTCACATGGGAAGACAACCACTAATCTTGGTAGCAGATCCAGAGCTTTGTAAAGAGGTGGGGATTAAGAAATTCAAAGACATTCCAAACAGAAGCATTCCCTCTCCTATTTCTGCTTCACCTCTTCATCAAAAAGGGCTCTTCTTCACCAGGGACTCACGATGGTCAACCATGAGAAACACCATATTGTCAGTGTATCAACCCTCACACCTGGCTAGCTTAGTGCCAATGATGCAATCATTCATAGAATCTGCAACACAAAATCTTGACACCCCAAATGAGGACATGATCTTTTCTGATCTTTCCCTAAGGCTAGCAACTGATGTGATTGGAGAGGCAGCATTTGGTGTCAACTTTGGCCTCTCTAAACCCCTTTCACTTTGTGAATCAATCAAGAGTGTTAGCAGTGTGAAAAACGGTGATGATGATGATGATGAAGTATCAGATTTCATCAATCAACACATCTACTCCACAACACAGCTTAAGATGGACTTGTCTGGTTCCTTCTCCATTATACTTGGTCTACTTGCTCCGATACTTCAGGAGCCATTCAGACAGATTCTGAAGAGAATACCAGGCACAATGGACAGGAAAATAGAGAGTATCAATGAGAAACTGAGTGGTCGTCTTGATGAGATTGTCAAGAGGAGAATGGAGGACAAGAACAGAACCTCAAAAAACTTCTTATCACTAATTTTGAATGCAAGAGAATCAAAGCTTGTATCAGAAAATGTGTTTTCACCTGAATACATTAGTGCTGTCACTTATGAGCACTTACTTGCTGGGTCAGCTACCACAGCCTTTACCTTGTCATCCATTGTCTACTTGGTTGCTGGTCACCTAGAAGTTGAGAAAAAGTTACTTCAAGAGATTGATGAATTTGGTCCATCTGATAAGATTCCCACTGCCCAAGATCTGCATGATAGTTTTCCTTATCTTGATCAGGTGATTAAAGAGGCCATGAGGTTTTACACTGTCTCCCCGTTGGTTGCAAGAGAAACATCAAATGAGGTAGAGATAGGAGGTTACCTTCTTCCAAAGGGGACGTGGGTATGGTTAGCTCTTGGAGTTCTAGCAAAAGATCCAAGAAATTTTCCTGATCCAGAGAAGTTTAAACCAGAGAGGTTTGACCCCAAATGTGAAGAAATGAAACTAAGGCACCCTTATGCATTCATACCATTTGGAATTGGTCCTCGGGCATGTATTGGTCAGAAATTTTCCCTACAAGAGCTCAAGCTTACTCTCATTCATTTGTACCGAAAATATGTGTTTCGTCATTCCCTTAACATGGAAAAGCCTGTAGAAATGGAATATGGAATGGTTCTCAACTTCAAGCATGGTGTCAAGCTTAGGGTCATAAGAAGAACACAATAA 1584 0.423 MVFMQLLGAMIILLLPLLGALLGYLYGPYWGLRKVPGPPSLPLLGHLHLLAKYGPDVFSLLADQYGPIYRFHMGRQPLILVADPELCKEVGIKKFKDIPNRSIPSPISASPLHQKGLFFTRDSRWSTMRNTILSVYQPSHLASLVPMMQSFIESATQNLDTPNEDMIFSDLSLRLATDVIGEAAFGVNFGLSKPLSLCESIKSVSSVKNGDDDDDEVSDFINQHIYSTTQLKMDLSGSFSIILGLLAPILQEPFRQILKRIPGTMDRKIESINEKLSGRLDEIVKRRMEDKNRTSKNFLSLILNARESKLVSENVFSPEYISAVTYEHLLAGSATTAFTLSSIVYLVAGHLEVEKKLLQEIDEFGPSDKIPTAQDLHDSFPYLDQVIKEAMRFYTVSPLVARETSNEVEIGGYLLPKGTWVWLALGVLAKDPRNFPDPEKFKPERFDPKCEEMKLRHPYAFIPFGIGPRACIGQKFSLQELKLTLIHLYRKYVFRHSLNMEKPVEMEYGMVLNFKHGVKLRVIRRTQ 527
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun8g00535 527 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 464 473 IPR017972 GO:0005506|GO:0016705
Viun8g00535 527 SUPERFAMILY Cytochrome P450 29 525 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun8g00535 527 PANTHER THROMBOXANE-A SYNTHASE 9 526 - -
Viun8g00535 527 Pfam Cytochrome P450 36 511 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun8g00535 527 PRINTS P450 superfamily signature 385 396 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun8g00535 527 PRINTS P450 superfamily signature 462 471 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun8g00535 527 PRINTS P450 superfamily signature 331 348 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun8g00535 527 PRINTS P450 superfamily signature 471 482 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun8g00535 527 Gene3D Cytochrome P450 26 527 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun8g00535 527 PRINTS E-class P450 group I signature 62 81 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun8g00535 527 PRINTS E-class P450 group I signature 320 337 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun8g00535 527 PRINTS E-class P450 group I signature 461 471 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun8g00535 527 PRINTS E-class P450 group I signature 340 366 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun8g00535 527 PRINTS E-class P450 group I signature 384 402 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun8g00535 527 PRINTS E-class P450 group I signature 424 448 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun8g00535 527 PRINTS E-class P450 group I signature 471 494 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun8g00535 527 PRINTS E-class P450 group I signature 175 193 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun8g00535 Viun-Chr8 3869771 3873486 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun8g00535 73 525 Cytochrome P450 AT2G26170 72.308 0.0 657
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun8g00535 K20771 - gmx:100805689 921.383
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun8g00535 8 3869771 3873486 Viun9g03289 9 39721381 39728041 PCT