Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun8g00509 ATGAATTCTGTTTCCTCCCAACGACGACGTTCACTCTCACTTCATTTAAGTGCTCCCACCACAGTCCACACGCACGGCACGTGCTCCCCTTGTTCCAACCAAAGCCATCTTCTTATTTCTTTTTCATTTCCCCCAAAACAAAACTCACACAACAGATTAAATTCCCACACGCTCCCTTTCTCCATGTTTCTAATTCAGGATCTCTTCTCCCTCCCGCGCCTCCACCACGTCTTCTCAGAATCGGTTTTGCAGTCTCTAAGCGAGTCGGTTACGAGTTCGAGTTGCAAAAGCACGGAGTTGGAGCAATGTCGCGACGAGTCAGCGGCGTTGGTGTTGAAATTCGTGGCGATGGCGTCGATTTTGTTGGCCGGATTTGGAGGGGTCGCGATTCCGCTGGCGGGGAAGTCGCGGCGGTTGCTGCGGCCGGACGGAGATGCCTTTACGGCGGCGAAGGCGTTCGCGGCGGGGGTGATTCTAGCCACGGGGTTTGTGCACATGCTGAGGGATTCGTGGGAGGCGCTTGGAGACCCGTGTCTGAGAACCTACTGGGGCGCGTGGGCGAAGTTTCCTTTCACCGGTTTTTTCGCCATGGTGTCCGCGCTCTGCACTCTCCTCGTTGACTTTATGGCGACTGCGTACTACGAGCGGAAGGAGGAGCTTGGGCGCGTGGAGCGTGCGAAGGTCGTAGAGTGTGGGAGTGACGAGGAGGCGCTGTTGGAAACGGGAATAGTGGAGGTTAAGGACGTTGGGGGAGAGGGAAGTCACGCGGTGCAGCAAACACACTCCCACTCGCACCACCGTGATGATGTGGAAAGTACCGTTCGGCACGTTGTGGTCTCACAGGTATTGGAACTTGGGATTGTATCTCATTCAATGATAATTGGGTTATCTCTGGGAGTTTCGCAAAGCCCTTGTACGATGAGACCCCTAATTGTGGCATTATCGTTCCATCAGTTCTTCGAAGGATTTGCACTTGGTGGATGTATCTCCCAAGCCCAATTCAAGACCTTGTCAGCAACACTAATGTCATGTTTTTTTGCACTAACAACGCCCCTAGGTGTTGCCATTGGGGCTGCTATTGCTTCAGTTTTTAATCCTTACAGTCCAGGAGCACTCATCACTGAAGGCATCTTGGACTCTTTATCAGCTGGGATTTTGATGTACATGGCTCTAGTCGACTTAATAGCTGCAGATTTTCTCAGTAAGAAAATGCATTGCAACTTTAGGCTTCAGATCACATGTTACTGCTTGCTTTTCCTTGGAGCTGGATTGATGTCTTCACTCGCAATTTGGGCATGA 1299 0.5158 MNSVSSQRRRSLSLHLSAPTTVHTHGTCSPCSNQSHLLISFSFPPKQNSHNRLNSHTLPFSMFLIQDLFSLPRLHHVFSESVLQSLSESVTSSSCKSTELEQCRDESAALVLKFVAMASILLAGFGGVAIPLAGKSRRLLRPDGDAFTAAKAFAAGVILATGFVHMLRDSWEALGDPCLRTYWGAWAKFPFTGFFAMVSALCTLLVDFMATAYYERKEELGRVERAKVVECGSDEEALLETGIVEVKDVGGEGSHAVQQTHSHSHHRDDVESTVRHVVVSQVLELGIVSHSMIIGLSLGVSQSPCTMRPLIVALSFHQFFEGFALGGCISQAQFKTLSATLMSCFFALTTPLGVAIGAAIASVFNPYSPGALITEGILDSLSAGILMYMALVDLIAADFLSKKMHCNFRLQITCYCLLFLGAGLMSSLAIWA 432
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun8g00509 432 Pfam ZIP Zinc transporter 112 429 IPR003689 GO:0016020|GO:0030001|GO:0046873|GO:0055085
Viun8g00509 432 PANTHER ZINC/IRON TRANSPORTER 109 425 - -
Viun8g00509 432 NCBIfam ZIP zinc/iron transport family 95 432 IPR004698 GO:0005385|GO:0016020|GO:0071577
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun8g00509 Viun-Chr8 3661118 3665946 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun8g00509 86 432 Inorganic Solute Cotransporters AT1G10970 62.698 4.10e-152 434
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun8g00509 K14709 - gmx:100809426 555.829