Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun8g00507 ATGAATTCTGTTTCCTCCCAACGACGACGTTCACTCTCACTTCATTTAAGTGCTCCCACCACAGTCCACACGCACGGCACGTGCTCCCCTTGTTCCAACCAAAGCCATCTTCTTATTTCTTTTTCATTTCCCCCAAAACAAAACTCACACAACAGATTAAATTCCCACACGCTCCCTTTCTCCATGTTTCTAATTCAGGATCTCTTCTCCCTCCCGCGCCTCCACCACGTCTTCTCAGAATCGGTTTTGCAGTCTCTAAGCGAGTCGGTTACGAGTTCGAGTTGCAAAAGCACGGAGTTGGAGCAATGTCGCGACGAGTCAGCGGCGTTGGTGTTGAAATTCGTGGCGATGGCGTCGATTTTGTTGGCCGGATTTGGAGGGGTCGCGATTCCGCTGGCGGGGAAGTCGCGGCGGTTGCTGCGGCCGGACGGAGATGCCTTTACGGCGGCGAAGGCGTTCGCGGCGGGGGTGATTCTAGCCACGGGGTTTGTGCACATGCTGAGGGATTCGTGGGAGGCGCTTGGAGACCCGTGTCTGAGAACCTACTGGGGCGCGTGGGCGAAGTTTCCTTTCACCGGTTTTTTCGCCATGGTGTCCGCGCTCTGCACTCTCCTCGTTGACTTTATGGCGACTGCGTACTACGAGCGGAAGGAGGAGCTTGGGCGCGTGGAGCGTGCGAAGGTCGTAGAGTGTGGGAGTGACGAGGAGGCGCTGTTGGAAACGGGAATAGTGGAGGTTAAGGACGTTGGGGGAGAGGGAAGTCACGCGGTGCAGCAAACACACTCCCACTCGCACCACCGTGATGATGTGGAAAGTACCGTTCGGCACGTTGTGGTCTCACAGGTATTGGAACTTGGGATTGTATCTCATTCAATGATAATTGGGTTATCTCTGGGAGTTTCGCAAAGCCCTTGTACGATGAGACCCCTAATTGTGGCATTATCGTTCCATCAGTTCTTCGAAGGATTTGCACTTGGTGGATGTATCTCCCAAGCCCAATTCAAGACCTTGTCAGCAACACTAATGTCATGTTTTTTTGCACTAACAACGCCCCTAGGTGTTGCCATTGGGGCTGCTATTGCTTCAGTTTTTAATCCTTACAGTCCAGGAGCACTCATCACTGAAGGCATCTTGGACTCTTTATCAGCTGGGATTTTGATGTACATGGCTCTAGTCGACTTAATAGCTGCAGATTTTCTCAGTAAGAAAATGCATTGCAACTTTAGGCTTCAGATCACATGTTACTGCTTGCTTTTCCTTGGAGCTGGATTGATGTCTTCACTCGCAATTTGGGCATGA 1299 0.5158 MNSVSSQRRRSLSLHLSAPTTVHTHGTCSPCSNQSHLLISFSFPPKQNSHNRLNSHTLPFSMFLIQDLFSLPRLHHVFSESVLQSLSESVTSSSCKSTELEQCRDESAALVLKFVAMASILLAGFGGVAIPLAGKSRRLLRPDGDAFTAAKAFAAGVILATGFVHMLRDSWEALGDPCLRTYWGAWAKFPFTGFFAMVSALCTLLVDFMATAYYERKEELGRVERAKVVECGSDEEALLETGIVEVKDVGGEGSHAVQQTHSHSHHRDDVESTVRHVVVSQVLELGIVSHSMIIGLSLGVSQSPCTMRPLIVALSFHQFFEGFALGGCISQAQFKTLSATLMSCFFALTTPLGVAIGAAIASVFNPYSPGALITEGILDSLSAGILMYMALVDLIAADFLSKKMHCNFRLQITCYCLLFLGAGLMSSLAIWA 432
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun8g00507 432 Pfam ZIP Zinc transporter 112 429 IPR003689 GO:0016020|GO:0030001|GO:0046873|GO:0055085
Viun8g00507 432 PANTHER ZINC/IRON TRANSPORTER 109 425 - -
Viun8g00507 432 NCBIfam ZIP zinc/iron transport family 95 432 IPR004698 GO:0005385|GO:0016020|GO:0071577
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun8g00507 Viun-Chr8 3659802 3665946 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun8g00507 86 432 Inorganic Solute Cotransporters AT1G10970 62.698 4.10e-152 434
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun8g00507 K14709 - gmx:100809426 555.829
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun8g00507 8 3659802 3665946 Viun9g03298 9 39793158 39795014 PCT