Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun8g00383 ATGGCGACAGCCTCAGAGAACAACACCAACTCCACGCGCCCCCAGCGCGAGGCCAAGAAGAGAGCCGCAGCTGCTATATGCGAAATGCAGGGAAATGCTAAGAAGAAGCGCGTCGTTTTGGGAGACCTCACTAATGTCTCAGACGCCGCCACCGCTGCAGTTGCCGTTTCAGAGACTCAAAAACGGAAAAAAATCAAACTTCAGAAACCAGTGCCGACGGTTGACACGCCGGAGAAAGTCGACGGGAGGAGCGACCCCCAACTGGGTGGGCCGTATGTTTCAGATATATACGAGTACCTTTGCGGAATGGAGGTTCTTCCTAGTAAGAGACCCTTACCAGATTATGTTCAGAAAGTTCAGAAGGACGTTAATGCTAACATGCGCGCGGTTCTTGTGGATTGGTTGGTTGAGGTTGCAGAAGAGTATAAACTGGTTTCAGACACGTTATATTTTTGTGTGGCTTACATAGATAGGTTTTTATCCTTGAATGTATTGTCCAGACATAGATTGCAGTTACTCGGGGTTGCTGCAATGCTTATCGCATCGAAATATGAAGAGATTAAACCACCTGAGGTGGAGGACTTCTGTTACATTACGGATAATACATACTCTAAGGAAGAGGTTGTGAATATGGAAGCCGATATATTGAAGGCTTTGAGGTTTGAATTGGGTGGTCCTACGGTGAAGACATTCTTGAGGAGGTTCTGCAGAGTTGGTCAAGAGGGCATTGATACTTCTGATCTCCAGTTTGATTTCCTTAGCTGCTACCTTGCTGAGCTCAGTTTATTGGATTATAATTGTGTAAAGTTTGTGCCATCTTTGGTGGCAGCATCTGTTGTATTCTTAGCAAGATTTATGTTAAGCCCAAAGAAACATCCTTGGAATTCGGCACTCCATCAGCTCACTAGATATAAACCTGCTGACTTCAAGGAATGTGTGCTAAACGTACATGATTTATACCTTAGTAGGAAGGGGCCTTCTTTGCAAGCTGTGAGAGAGAAATACCAACAGCATAAGTTTAAATGTGTGGCAAGAACACCATCTCCTCCCGAGATACCCCTTTCTTTTTTGAATTTTCAGGATCAGATTCTTAGGCGTTGA 1101 0.4487 MATASENNTNSTRPQREAKKRAAAAICEMQGNAKKKRVVLGDLTNVSDAATAAVAVSETQKRKKIKLQKPVPTVDTPEKVDGRSDPQLGGPYVSDIYEYLCGMEVLPSKRPLPDYVQKVQKDVNANMRAVLVDWLVEVAEEYKLVSDTLYFCVAYIDRFLSLNVLSRHRLQLLGVAAMLIASKYEEIKPPEVEDFCYITDNTYSKEEVVNMEADILKALRFELGGPTVKTFLRRFCRVGQEGIDTSDLQFDFLSCYLAELSLLDYNCVKFVPSLVAASVVFLARFMLSPKKHPWNSALHQLTRYKPADFKECVLNVHDLYLSRKGPSLQAVREKYQQHKFKCVARTPSPPEIPLSFLNFQDQILRR 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun8g00383 366 FunFam Mitotic cyclin 6 111 211 - -
Viun8g00383 366 Pfam Cyclin, C-terminal domain 226 348 IPR004367 -
Viun8g00383 366 SMART cyclin_7 133 217 IPR013763 -
Viun8g00383 366 SMART cyclin_7 230 318 IPR013763 -
Viun8g00383 366 SUPERFAMILY Cyclin-like 226 351 IPR036915 -
Viun8g00383 366 Gene3D - 95 344 - -
Viun8g00383 366 PANTHER CYCLINS 60 342 IPR039361 -
Viun8g00383 366 PIRSF Cyclin_A_B_D_E 1 355 IPR046965 GO:0016538|GO:0044772
Viun8g00383 366 ProSitePatterns Cyclins signature. 128 159 IPR006671 -
Viun8g00383 366 SMART Cyclin_C_2 226 349 IPR004367 -
Viun8g00383 366 Pfam Cyclin, N-terminal domain 95 223 IPR006671 -
Viun8g00383 366 FunFam Cyclin A1 213 345 - -
Viun8g00383 366 MobiDBLite consensus disorder prediction 1 21 - -
Viun8g00383 366 SUPERFAMILY Cyclin-like 84 223 IPR036915 -
Viun8g00383 366 CDD CYCLIN_AtCycA-like_rpt2 226 340 - -
Viun8g00383 366 Gene3D - 111 224 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun8g00383 Viun-Chr8 2571237 2574768 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun8g00383 8 365 Core Cell Cycle Gene Families AT1G47230 57.104 3.23e-147 419
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun8g00383 K06627 - gmx:100801988 581.637