Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun8g00290 ATGAGTCCAATGTTGTCAACAAAAATTGTTGTGTGGTTGATGTTTTTGTGTTGGTCGTGTGAGGGGAACCAACAAGGGGAATATCTGTATAGGTTGATTCGATCAAAGAGGGGTGATGAGAAAGTGGTGTCATCAGAAGAAGCTTCAATGGTGGCCAAAAATGGTGGTGGTGATGAAGATTTTTGGAAGGTTGAAGAAGAAAGGGTGGTGTTGATGGAAGAAGACAAAGTGAAGGGTTTACCAGGAGAACCAGAAGGTGTTGATTTTGATCAATATGGTGGCTATGTAACTGTGGATGCAAAAAAAGGAAGAAGATTGTTCTATTACTTTGTAGAGTCACCTCAAAATGCTTCTCACAAGCCCCTTCTTCTATGGCTCAATGGAGGGCCTGGCTGCTCATCCCTTGGATATGGAGGCATGCAAGAATTGGGACCTTTCAGAGTGAACAGTGACGGAAGAACACTACGCAGAAATGAATATGCATGGAACAATGTGGCAAACGTTATTTTCTTAGAATCTCCAGCAGGAGTTGGATTTTCATATTCAAACACTTCTTCAGACTACACAAACACTGGAGACAAGAGCACAGCCATGGACTCTTACACTTTTCTTATAAACTGGCTTCACAGATTTCCACACTACAAATCTCGAGACTTGTTCATCACTGGAGAAAGCTATGCTGGACATTATGTTCCTCAGCTAGCTCACACTATTCTCACTAATAATAAGCTTACAAATCACACAGTCATCAACCTCAAAGGGATTGCGATTGGGAATGGTTGGATAGATGATAATATATGTGCAAAGGGAATGTATGACTATTTCTGGACCCATGCTTTGAACTCAGATGAAACCCATGAAGGAATTGAAAGGCATTGTGACTTTGAGAGTGGGAACATGACAAGTGAATGCAACGAATACCAAATAAGAGGGGATAATGAGATTGGAGTCATTGACATTTATGACATATATGGTCCCCCTTGTGATTCAACTGCCACAAAATCTCATCAAACTTCTGCTCCTAACTCTGACAGCAATTTCGACCCTTGTTCTGACGAATATACCAAATCCTACTTAAACATCGCTCAAGTACAAGAGGCTCTTCATGCAAAACTCTCAGAATGGTCTCCTTGCAGTGGAGTGGGATGGACAGATAGCCCAGCAACAGTTCTACCCACTATAAATCGGATAATATCAAGTGGCATAAGAACCTGGATATATAGTGGAGATACAGATGGGCGCGTTCCCATAACATCATCTAGGTATTCAGTAAATTCCTTGAAACTTCCAGTGGAGACAACATGGCGTCCCTGGTATTCTGGAGATGAGGTTGGAGGATACTTGATTGGGTACAAAGGACTCACCCTCATCACTGTAAGAGGAGCTGGGCACATGGTTCCAAGTTACCAACCAAAGAGAGCGTTAACCATGATCTCGTTTTTTCTTCGGGGAGAACTTCCTCCCGAATTGAACTCTTAG 1479 0.4226 MSPMLSTKIVVWLMFLCWSCEGNQQGEYLYRLIRSKRGDEKVVSSEEASMVAKNGGGDEDFWKVEEERVVLMEEDKVKGLPGEPEGVDFDQYGGYVTVDAKKGRRLFYYFVESPQNASHKPLLLWLNGGPGCSSLGYGGMQELGPFRVNSDGRTLRRNEYAWNNVANVIFLESPAGVGFSYSNTSSDYTNTGDKSTAMDSYTFLINWLHRFPHYKSRDLFITGESYAGHYVPQLAHTILTNNKLTNHTVINLKGIAIGNGWIDDNICAKGMYDYFWTHALNSDETHEGIERHCDFESGNMTSECNEYQIRGDNEIGVIDIYDIYGPPCDSTATKSHQTSAPNSDSNFDPCSDEYTKSYLNIAQVQEALHAKLSEWSPCSGVGWTDSPATVLPTINRIISSGIRTWIYSGDTDGRVPITSSRYSVNSLKLPVETTWRPWYSGDEVGGYLIGYKGLTLITVRGAGHMVPSYQPKRALTMISFFLRGELPPELNS 492
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun8g00290 492 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 75 471 IPR001563 GO:0004185|GO:0006508
Viun8g00290 492 FunFam Carboxypeptidase 390 484 - -
Viun8g00290 492 FunFam Carboxypeptidase 348 486 - -
Viun8g00290 492 Gene3D - 350 381 - -
Viun8g00290 492 PRINTS Carboxypeptidase C serine protease (S10) family signature 207 232 IPR001563 GO:0004185|GO:0006508
Viun8g00290 492 PRINTS Carboxypeptidase C serine protease (S10) family signature 454 467 IPR001563 GO:0004185|GO:0006508
Viun8g00290 492 PRINTS Carboxypeptidase C serine protease (S10) family signature 158 170 IPR001563 GO:0004185|GO:0006508
Viun8g00290 492 PRINTS Carboxypeptidase C serine protease (S10) family signature 171 181 IPR001563 GO:0004185|GO:0006508
Viun8g00290 492 Pfam Serine carboxypeptidase 81 483 IPR001563 GO:0004185|GO:0006508
Viun8g00290 492 ProSitePatterns Serine carboxypeptidases, histidine active site. 454 471 IPR033124 GO:0004185
Viun8g00290 492 Gene3D - 390 484 - -
Viun8g00290 492 SUPERFAMILY alpha/beta-Hydrolases 77 485 IPR029058 -
Viun8g00290 492 FunFam Carboxypeptidase 71 330 - -
Viun8g00290 492 ProSitePatterns Serine carboxypeptidases, serine active site. 221 228 IPR018202 GO:0004185
Viun8g00290 492 Gene3D alpha/beta hydrolase 70 339 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun8g00290 Viun-Chr8 1857626 1862347 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun8g00290 355 485 Calmodulin-binding Proteins AT2G22960 29.412 7.64e-14 68.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun8g00290 K16297 - gmx:100820473 814.298