Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun8g00264 ATGTTCACTAATTCACACACGCTAATGCAAACCCTGTTGCCACCTTTGCCGGAGCCAGACCTCTCCCTCAACATAAGCCCTCCCTCTATTTCCGAGGTCAAGGAAGTGGCGCCTTTCGGCAAACTCATTTACAGCGACATGTGTTCGACTTCTGATTCGGGAAGCAGTGGAGGAAGCGATTTGAGCCATGAGTTCCACAACCTTGCTCACCCTCGTGAACCCACCTTGAAGTTAGGCTTCGGAACAACGGATTTCAATCCTCGCCGTCATCAGGCTCAAGGTGACACCAGAAGCTTCAACCACCACCACCACCACCACCTTCAGCCTCACATCTATGGCCGCGATTTCAAACGAACTGCAAGAGTCGTCAATGGCGTCAAAAGAAGCGTCCGGGCTCCTCGAATGAGATGGACCACCACCCTCCATGCCCATTTTGTTCACGCGGTTCAACTCCTTGGCGGCCATGAGAGAGCAACTCCGAAGTCTGTGTTAGAGTTAATGAACGTTAAGGATCTAACCCTAGCACACGTCAAGAGTCACTTGCAGATGTATAGAACAGTGAAGAGCACTGACAAAGGCACCACAGGTCATGGGCAGACAGATATTTCAGTATTGAATCCAAGGCCAGGGATTAACATGGTTCATCTGCATGCACCTTCGCCCAATTTACCAGACCCCATTATTCAAAGGACAACGTGGCAACAATCATCAATAGAGACAAAAACAAAGAACAGTAGACAAGAAGCAGAGATGGGTTTGACGTATTGCGAGGTGAAGAAGGGAAGTAGTGAAAGCATGGTGATGAATGGCTTGGATTGTACCAGTTTGTCACGTTCCGAGGGAATGCTTGACCTAGAATTCAGCCTTGGAAGACCCATTTGGCAAAAAGACCACGCAGAATCGTCGAGAGAGTTAACTCTTTTAAACTGCTAA 933 0.4855 MFTNSHTLMQTLLPPLPEPDLSLNISPPSISEVKEVAPFGKLIYSDMCSTSDSGSSGGSDLSHEFHNLAHPREPTLKLGFGTTDFNPRRHQAQGDTRSFNHHHHHHLQPHIYGRDFKRTARVVNGVKRSVRAPRMRWTTTLHAHFVHAVQLLGGHERATPKSVLELMNVKDLTLAHVKSHLQMYRTVKSTDKGTTGHGQTDISVLNPRPGINMVHLHAPSPNLPDPIIQRTTWQQSSIETKTKNSRQEAEMGLTYCEVKKGSSESMVMNGLDCTSLSRSEGMLDLEFSLGRPIWQKDHAESSRELTLLNC 310
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun8g00264 310 Pfam Myb-like DNA-binding domain 134 185 IPR001005 -
Viun8g00264 310 FunFam Myb family transcription factor 131 189 - -
Viun8g00264 310 Gene3D - 132 189 - -
Viun8g00264 310 PANTHER TRANSCRIPTION FACTOR KAN2-RELATED 19 298 IPR044847 GO:0000976|GO:0006355|GO:0010158
Viun8g00264 310 SUPERFAMILY Homeodomain-like 130 187 IPR009057 -
Viun8g00264 310 NCBIfam myb-like DNA-binding domain, SHAQKYF class 133 186 IPR006447 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun8g00264 Viun-Chr8 1699452 1703753 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun8g00264 99 201 G2-like Transcription Factor Family AT5G42630 76.415 2.39e-53 172
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Viun8g00264 Myb_DNA-binding 1.3e-05 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun8g00264 - - vra:106764099 523.857
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun8g00264 8 1699452 1703753 Viun8g00264 8 1699452 1703753 ECH
Viun8g00264 8 1699452 1703753 Viun9g03532 9 41130924 41135566 PCT