Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun8g00220 ATGGCAAATTCGCTCGCTATTCTTCTTCAGTTTCTTCCTTTCTTTCTTGTATTTAACCATGCAAGTTCGGAGTCGTTCATCGGCGTGAACTATGGGCAAGTCGCCGACAACCTGCCGCCGCCTTCGGCGACGGCGAAGCTGCTCCAATCGACGGCGATAGGGAAAGTGCGGTTGTACGGAACCGACCCGGCGATCATAAAAGCGCTGGCGAACACGGGAATAGGAATCGTGATCGGCGCGGCGAACGGCGACATACCGGGCCTGGCGTCGGACCCGAACTTCGCGAAAACGTGGGTGAACACCAACGTGGTGCCGTACTATCCCGCGAGCAACATCATCCTCGTGACTGTTGGCAACGAAGTGATAACCTCGAACGACGCGGGCCTCGTGAACCAGATGCTGCCGGCGATCCAGAACGTGCAGGGCGCGCTGGAGGCGGCCTCTCTCGGCGGCAAGATCAAGGTGTCGACGGTGCACTCGATGGCGGTTCTGAGGGACTCGGAGCCTCCCTCCGCCGGAAGGTTCCACCCTGAGTACGACACCGTTTTGCAGGGGCTGTTGTCGTTTAACAATGCCACGGGCTCGCCCTTCGCCATCAACCCTTATCCCTACTTCGCCTACAGAAGCGACCCTGGCAGAGCCGATAACCTTGCTTTCTGCCTCTTTCAGCCTAACGCCGGCCGAATTGACTCTAACACCAACATCAAGTACATGAACATGTTCGATGCTCAGGTGGATGCGGTTCGATCAGCGTTGGATTCTCTGGGGTTTAAGAATGTTGAGATTGTGGTTGCAGAGACAGGATGGCCCTACAAGGGAGACAGCAATGAAGCTGGTCCAAGTCTTGAGAATGCTAAGGCTTATAATGGTAATCTCATTGCACACCTTCGATCTATGGTTGGGACTCCATTGATGCCTGGAAAATCAGTGGACACGTACCTGTTTGCTCTGTATGATGAAGACTTGAAGCCCGGTGCTGCTTCTGAGAGAGCCTTTGGACTCTTCAACCCTGATCAAACCATGATCTATGATGCAGGCCTCACCAAACAGCAACAAACCAGTAGCCCCGTGCCAGTAGTTGCTCCGACCACTCCGGATGTGTCAAAATCTCCCATGACTCCAAAGCCAACAACAGTTCCAAGTCCAACCAAAACAAATAGTAGTGCAACCTGGTGTGTGCCGAAAGCAGGAGTGTCAGAGGAACAGTTGCAAGCAAATTTGGACTATGCTTGTGGGCAGGGGATTGATTGTGCTGCAATTCAACAAGGAGGTGCTTGTTTTGAACCTAACACTTTACTAAACCATGCTGCATATGCCATGAATCTATTGTATCAAACTGCTGGACGGAATCCATTGAGTTGTGATTTCTCGCAAACAGCCATGTTATCAACAAATAATCCAAGTTACAAGAGTTGTCTTTATGCCGGTGGAAATGCCTAA 1440 0.5194 MANSLAILLQFLPFFLVFNHASSESFIGVNYGQVADNLPPPSATAKLLQSTAIGKVRLYGTDPAIIKALANTGIGIVIGAANGDIPGLASDPNFAKTWVNTNVVPYYPASNIILVTVGNEVITSNDAGLVNQMLPAIQNVQGALEAASLGGKIKVSTVHSMAVLRDSEPPSAGRFHPEYDTVLQGLLSFNNATGSPFAINPYPYFAYRSDPGRADNLAFCLFQPNAGRIDSNTNIKYMNMFDAQVDAVRSALDSLGFKNVEIVVAETGWPYKGDSNEAGPSLENAKAYNGNLIAHLRSMVGTPLMPGKSVDTYLFALYDEDLKPGAASERAFGLFNPDQTMIYDAGLTKQQQTSSPVPVVAPTTPDVSKSPMTPKPTTVPSPTKTNSSATWCVPKAGVSEEQLQANLDYACGQGIDCAAIQQGGACFEPNTLLNHAAYAMNLLYQTAGRNPLSCDFSQTAMLSTNNPSYKSCLYAGGNA 479
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun8g00220 479 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE BG1-RELATED-RELATED 16 462 IPR044965 GO:0004553|GO:0005975
Viun8g00220 479 Pfam X8 domain 390 461 IPR012946 -
Viun8g00220 479 Gene3D - 384 475 - -
Viun8g00220 479 Gene3D Glycosidases 26 355 - -
Viun8g00220 479 SMART X8_cls 390 474 IPR012946 -
Viun8g00220 479 FunFam Glucan endo-1,3-beta-glucosidase 14 25 353 - -
Viun8g00220 479 MobiDBLite consensus disorder prediction 353 386 - -
Viun8g00220 479 SUPERFAMILY (Trans)glycosidases 27 345 IPR017853 -
Viun8g00220 479 FunFam glucan endo-1,3-beta-glucosidase 7 386 475 - -
Viun8g00220 479 Pfam Glycosyl hydrolases family 17 27 344 IPR000490 GO:0004553|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun8g00220 Viun-Chr8 1376898 1379472 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun8g00220 21 474 Miscellaneous Gene Families AT2G16230 64.978 0.0 608
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun8g00220 - - gmx:100802287 856.284