Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Viun8g00207 | ATGGGAATGGGGGAAATTGCAGTGAGTGTGGTTTCAATGTTGTTGTTAATGGCTGGGTTAACAATGGGAATGCGTTTGAGTTCGACAACGGAATGGCACGCGTTAAGGGAGCTTCGATCGTCGTTGGGGATTAGGGCAAAGTATTGGCCCATAAAAGCAGAACCGTGCGGGAACTGGACCGGAGTTCATTGCCGGAACGGTCGAGTTGTGGGTATAAACGTGTCCGGTTTGAGGAGAACCCGGTCGGGTAGCCTTAACCCAAGTTTTGAAGTGGATTCTCTTGTGAATTTGACACTGTTAGAATCGTTTAATGCTTCTGGGTTTATGCTTAATGGGTCTATTCCTGAGTGGTTGGGTGAGAGAATGAAGGTGTTGGATGTACTTGACCTTAGGCTTTGTTCTGTAATGGGTTTGATTCCTTATTCAATTGGGGAGTTGAGTAGGTTGAAGGTTTTGGTGCTTTCAGGGAATGTTCTCACTGGTAAAATGCCTTCAACGCTTGGGAACCTCACAGGACTCACTGTTCTTGATCTCTCTAATAACACTCTTTCAGGGATTGTGCCTGCTTCTGTGACTCAACTTGGGAATCTCACAAGGCTCGATCTTTCTAACAATTACTTCTCTGGGACTGTTCCAGCTGAACTGGGTGCCCTTTCGAGTCTTCAAAACTTGAACCTTTCTGGGAATTCTTTCACTGGGTCGGTTCCCTCTCAACTGGGTAACCTTTCTAAGTTGGTTGAGATTGATCTTAGCAAGAATTTTCTGTCGGGTTCATTTTTTGGTAATTTGTCCTTTTCTCGGCTCTCGGCCCTGGAGGTTCTCATTCTCAGCGAGAATTCGTTTGATGGTGCTCTTCCTCATAATTTTAGCTCAACTCCCAGGTTGAGCTTTCTTGATGTGTCCAGTAACAACTTCACTGGGACACTGCAGAATTTCACAAGTTGGAATGATAACTCTGCTGGTGTTGCGTTCAATCTGTCAAATAACATGTTCTATGGACTTGTGAACACTTTACTGTACAAGTTTAAAAAAGTTGATTTGTCAAGTAATTATTTGGAAGGTGAGGTTCAAAGTGGTGGTAATGTTACTCTAGATAGAAATTGCCTACAAATGACTCCAAACCAGAGGAATTTGGAAGAGTGTAGAGATTTTTATGCTGCAAGAAATTTAACCTTTGCATTTGCAGAATCCAAGTCCAGCAGCAGAAGGGTGGTATTCATACTGGTAGGAATATTTGGTGGGCTTGGCTTTATTGCGGTGCTGACACTGGTCCTTGTGTTGGTTCTAAAACAATGTCACAGTCATAGAAGCTCAGAAGTTCAAAGGGGGACCAAAGAAGAGGGACCTATTGAGGAAGGGGAAAACCCTATACCTCCTAAGGATGCTGATTTTGTTACTGGCGTGGGAGAAGCATTTAGTTCTGAGCAAATTATCCGTTTAACTGGCAATTTTGCTGATGCAAATATCATTAAGCACGGCCATTCCGGGGTCCTCTTCTTGGGAGTCTTGGAGAGTGGAGCAACTGTGGTTGTCAAAAGGATAGATTTGAATTTATTTAAGAGAGAATCATATGTCGTGGAATTGAGACTATTAAGTAAGGTTTCACATGCAAGATTGGTCCCAATCCTTGGCCACTGCTTGGACAATGAGAATGAGAAATGCATAGTTTACAAATACATGCCAAACAGAGATTTGGCTACTTCTTTGCACAGAGTTAATGAGTCAGATGGTAAATTACAGTCCTTGGATTGGATCACGAGATTGAAAATTGCAATAGGAGCTGCTGAAGGCCTAGCTTACTTGCATGAGTGCAGCCCTCCCCTTGTCCACAGGGATGTCCAAGCTAGCAGCATACTTCTTGATGATAAATTTGAAGTGCGACTTGGAAGTTTGAGCCAGGTTACCGCTCAAGGAGATGTTCAACAAGGAGTCATCTCAAGGGTTTTCAGCAAGCCACCATCTACTAGTGAAGGCGATCCTGGTAAATCATCAGTGACATGCACCTACGACGTGTACTGTTTCGGGAAGATTTTGCTGGAACTCATTACTGGCAACATTGAAGTGAGCAAGTCAGATGATGGAACAACAAAAGAGTGGTTAGAACAAACATTGCCGTACATCACTCTGTACGATAAAGAACGTGTGACTAAGATTGTTGACCCACAATTGATCGTGGATGAGGACCTATTGGAAGAGGTGTGGGCTATGGCAATTGTGGCTCATGCATGCTTGAATCCAAAGCCTTCAAAACGTCCTCCAATGAGACATGTTCTGAAAGCATTGGAAAATCCATTGAAGATTGTGAGAGAAGATAACATCAGCTCAGCAAGGTTGAGATCAAACTCTTCTAGGAAATCTTGGAGCACTGCGTTTTTTGGTAGCTGGAGACACAGTTCATCAGACAGTGTTGTTGCCACAACACATGCAAACAAAGAGAGTACCAGTGACACTAAAAAATCAAGAGTAGGTTCTCAAAGTAGTGGCAATGATCACTCATCTTCCAACAAAAGGTCATCCAATGAAATTTTTCCTGAACCATTGGAAGTGCAAGATGTGGAGGCTGGAGAAGCAGGGTAA | 2577 | 0.4331 | MGMGEIAVSVVSMLLLMAGLTMGMRLSSTTEWHALRELRSSLGIRAKYWPIKAEPCGNWTGVHCRNGRVVGINVSGLRRTRSGSLNPSFEVDSLVNLTLLESFNASGFMLNGSIPEWLGERMKVLDVLDLRLCSVMGLIPYSIGELSRLKVLVLSGNVLTGKMPSTLGNLTGLTVLDLSNNTLSGIVPASVTQLGNLTRLDLSNNYFSGTVPAELGALSSLQNLNLSGNSFTGSVPSQLGNLSKLVEIDLSKNFLSGSFFGNLSFSRLSALEVLILSENSFDGALPHNFSSTPRLSFLDVSSNNFTGTLQNFTSWNDNSAGVAFNLSNNMFYGLVNTLLYKFKKVDLSSNYLEGEVQSGGNVTLDRNCLQMTPNQRNLEECRDFYAARNLTFAFAESKSSSRRVVFILVGIFGGLGFIAVLTLVLVLVLKQCHSHRSSEVQRGTKEEGPIEEGENPIPPKDADFVTGVGEAFSSEQIIRLTGNFADANIIKHGHSGVLFLGVLESGATVVVKRIDLNLFKRESYVVELRLLSKVSHARLVPILGHCLDNENEKCIVYKYMPNRDLATSLHRVNESDGKLQSLDWITRLKIAIGAAEGLAYLHECSPPLVHRDVQASSILLDDKFEVRLGSLSQVTAQGDVQQGVISRVFSKPPSTSEGDPGKSSVTCTYDVYCFGKILLELITGNIEVSKSDDGTTKEWLEQTLPYITLYDKERVTKIVDPQLIVDEDLLEEVWAMAIVAHACLNPKPSKRPPMRHVLKALENPLKIVREDNISSARLRSNSSRKSWSTAFFGSWRHSSSDSVVATTHANKESTSDTKKSRVGSQSSGNDHSSSNKRSSNEIFPEPLEVQDVEAGEAG | 858 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Viun8g00207 | 858 | FunFam | Putative LRR receptor-like serine/threonine-protein kinase | 560 | 781 | - | - | |
Viun8g00207 | 858 | Gene3D | Phosphorylase Kinase; domain 1 | 460 | 559 | - | - | |
Viun8g00207 | 858 | MobiDBLite | consensus disorder prediction | 819 | 841 | - | - | |
Viun8g00207 | 858 | SUPERFAMILY | Protein kinase-like (PK-like) | 466 | 761 | IPR011009 | - | |
Viun8g00207 | 858 | FunFam | Leucine-rich repeat receptor protein kinase EMS1 | 188 | 288 | - | - | |
Viun8g00207 | 858 | Gene3D | Ribonuclease Inhibitor | 263 | 381 | IPR032675 | - | |
Viun8g00207 | 858 | Gene3D | Ribonuclease Inhibitor | 190 | 262 | IPR032675 | - | |
Viun8g00207 | 858 | Pfam | Protein tyrosine and serine/threonine kinase | 490 | 760 | IPR001245 | GO:0004672|GO:0006468 | |
Viun8g00207 | 858 | Gene3D | Ribonuclease Inhibitor | 29 | 189 | IPR032675 | - | |
Viun8g00207 | 858 | MobiDBLite | consensus disorder prediction | 802 | 858 | - | - | |
Viun8g00207 | 858 | Gene3D | Transferase(Phosphotransferase) domain 1 | 560 | 782 | - | - | |
Viun8g00207 | 858 | FunFam | LRR receptor-like serine/threonine-protein kinase ERECTA | 91 | 187 | - | - | |
Viun8g00207 | 858 | ProSiteProfiles | Protein kinase domain profile. | 484 | 766 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Viun8g00207 | 858 | SMART | LRR_typ_2 | 194 | 217 | IPR003591 | - | |
Viun8g00207 | 858 | SMART | LRR_typ_2 | 146 | 169 | IPR003591 | - | |
Viun8g00207 | 858 | SMART | LRR_typ_2 | 218 | 242 | IPR003591 | - | |
Viun8g00207 | 858 | SMART | LRR_typ_2 | 268 | 291 | IPR003591 | - | |
Viun8g00207 | 858 | SMART | LRR_typ_2 | 170 | 193 | IPR003591 | - | |
Viun8g00207 | 858 | Pfam | Leucine rich repeat | 147 | 206 | IPR001611 | GO:0005515 | |
Viun8g00207 | 858 | PRINTS | Leucine-rich repeat signature | 173 | 186 | - | - | |
Viun8g00207 | 858 | PRINTS | Leucine-rich repeat signature | 218 | 231 | - | - | |
Viun8g00207 | 858 | PANTHER | LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED | 400 | 788 | - | - | |
Viun8g00207 | 858 | FunFam | Predicted protein | 456 | 559 | - | - | |
Viun8g00207 | 858 | SUPERFAMILY | L domain-like | 54 | 333 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Viun8g00207 | Viun-Chr8 | 1317464 | 1322360 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Viun8g00207 | 20 | 652 | Miscellaneous Gene Families | AT2G16250 | 47.858 | 0.0 | 570 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_LRR-XIV | Viun8g00207 | PK_Tyr_Ser-Thr | 1.3e-19 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Viun8g00207 | - | - | gmx:100798381 | 1318.14 |