Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun8g00179 ATGGCCTCATCCAGTGGAACTTCTACCATGTCCACGATGTTGATTCAGACTTCAGGGTCTGAGGAGGATCTGCAGCTTCTGATGGAACAAAGAAGAAAGAAGAGGAAGCAATCGAACCGTGACTCGGCCAGAAGATCAAGGATGCGAAAGCAGAAGCACATGGACGATCTCACTGCACAGATGCAGAGTCTCCAGAAGGAAAATGACCTACTCCTGACCCAACTCAACATCACCACCCAACACCATCTCAAGCTCCACGCTCACAACTCCATTCTCATAGCCCAGAAGACTGAACTCACTCAAACCCTTCACTCCTTCAATCACATCATCAAACTCATCAACGCAACAAACCCTAATTATCATCACCATAACAATAACAAAACCAACAATAATTTCGTCAACCCCACCATGCACATGCCCTTCCTTAACCACCCAATTGTCGCCACCGCAGACAACATGTTTCTGTGGTGA 471 0.4692 MASSSGTSTMSTMLIQTSGSEEDLQLLMEQRRKKRKQSNRDSARRSRMRKQKHMDDLTAQMQSLQKENDLLLTQLNITTQHHLKLHAHNSILIAQKTELTQTLHSFNHIIKLINATNPNYHHHNNNKTNNNFVNPTMHMPFLNHPIVATADNMFLW 156
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun8g00179 156 CDD bZIP_plant_GBF1 32 82 IPR045314 GO:0003700|GO:0006355
Viun8g00179 156 PANTHER BZIP TRANSCRIPTION FACTOR 44 7 153 - -
Viun8g00179 156 FunFam BZIP transcription factor 29 81 - -
Viun8g00179 156 SUPERFAMILY Leucine zipper domain 31 86 IPR046347 GO:0003700|GO:0006355
Viun8g00179 156 MobiDBLite consensus disorder prediction 1 59 - -
Viun8g00179 156 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 29 76 IPR004827 GO:0003700|GO:0006355
Viun8g00179 156 SMART brlzneu 27 91 IPR004827 GO:0003700|GO:0006355
Viun8g00179 156 Coils Coil 47 74 - -
Viun8g00179 156 Pfam bZIP transcription factor 30 85 IPR004827 GO:0003700|GO:0006355
Viun8g00179 156 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 34 49 IPR004827 GO:0003700|GO:0006355
Viun8g00179 156 Gene3D - 29 84 - -
Viun8g00179 156 MobiDBLite consensus disorder prediction 1 24 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun8g00179 Viun-Chr8 1097048 1098190 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun8g00179 27 151 bZIP Transcription Factor Family AT4G34590 45.113 1.21e-29 104
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Viun8g00179 bZIP_1 2.3e-10 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun8g00179 K25786 - gmx:100101889 185.267