Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun8g00171 ATGCATCATCAGAAGCACTGCAATCTCACAGCAATATATGCATTGTTGAAACAGTCAAAGGCTTGGTTTCCCACATCACATGATTTGGTAAAAAGATTGGGTGGTTCGAATTTTGAGTACTATATATGTCACACTAGCCAACCCAATAGAACACACACAATCACCAAAATTAGCAAGCTCTCAAATTTAGTTCCTATACCTGTCACCATGACTTTCATCAAACTCACTCTTCTTGCAATACTAATAGCTTTTTTCTCTGTTAAACTCTCCTGTGCTCACCCTGGTTTTCGTTTCGGCTGGGGTGGTCACCATGGAGGGATATCTTTTGGCCTTTCACCTCAATTCTATCAGTTTTCTTGCCCCCAAGCTAACGACATTGTCATGTCAGTGTTGGAGAAGGCCATTGCAAAAGACATGAGAATGCCTGCTTCTCTACTTAGACTTCACTTTCATGATTGCTTTGTGCAGGGATGCGATGCATCAATTTTGTTGGATGATAGCAGAACAATTGTCAGCGAAAAAAATGCTGGACCTAACAAGAACTCTGTCCGAGGTTTTGAAGTGATTGATGAAATGAAGTCTAGGTTGGAAGAAGCATGTCCTCAGACTGTGTCCTGTGCAGACATTCTTGCCCTTGCTGCTAGGGGCTCCACTGTTCTTAGTGGAGGACCTAACTGGGAACTCCCATTAGGGAGACGAGACTCAAAAACTGCAAGCCTGAGCGGGTCAAACAAAAATATTCCTCCACCAAACGCCACCATTGAAACTCTGATAACATTCTTTAAACGTCAAGGCCTTGATGAAGTAGACCTTGTTGCCCTCTCAGGTGCACATACCATTGGGGTGGCAAGATGTGCCACATTCAAGCAGAGACTATACAACCAAAAGGGAAACAACGAACCAGATGAGAATCTAGAAAAGTCCTTTTACTTTGATTTGAAGACAATGTGCCCAAAATCTGGAGGAGACAACTTCATTTCTCCTTTGGACTTTGGCTCTCCAAGATTGTTTGATAATACATATTTCAAACTCATTCTTAGGGGGAAAGGACTTCTTAACTCAGATCAAGTGCTTCTTGTGGGAAATGTTAAGGAAACTCGTAAATTGGTCAAGAAATATGCAGAAGATGAGAGTCTCTTCTTCGAGCAATTTTCCACGTCCATGATCAAGATGGCCAACCTTCGTCCTCTCACTGGATTCAATGGTCAAGTTAGGAAAAACTGTCGCAGAGTTAATTAA 1239 0.4213 MHHQKHCNLTAIYALLKQSKAWFPTSHDLVKRLGGSNFEYYICHTSQPNRTHTITKISKLSNLVPIPVTMTFIKLTLLAILIAFFSVKLSCAHPGFRFGWGGHHGGISFGLSPQFYQFSCPQANDIVMSVLEKAIAKDMRMPASLLRLHFHDCFVQGCDASILLDDSRTIVSEKNAGPNKNSVRGFEVIDEMKSRLEEACPQTVSCADILALAARGSTVLSGGPNWELPLGRRDSKTASLSGSNKNIPPPNATIETLITFFKRQGLDEVDLVALSGAHTIGVARCATFKQRLYNQKGNNEPDENLEKSFYFDLKTMCPKSGGDNFISPLDFGSPRLFDNTYFKLILRGKGLLNSDQVLLVGNVKETRKLVKKYAEDESLFFEQFSTSMIKMANLRPLTGFNGQVRKNCRRVN 412
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun8g00171 412 ProSiteProfiles Plant heme peroxidase family profile. 110 412 IPR002016 GO:0004601|GO:0006979|GO:0020037
Viun8g00171 412 PANTHER PEROXIDASE 72-RELATED 109 411 IPR000823 GO:0004601|GO:0006979|GO:0020037
Viun8g00171 412 Gene3D Peroxidase, domain 2 248 392 - -
Viun8g00171 412 FunFam Peroxidase 248 391 - -
Viun8g00171 412 CDD secretory_peroxidase 110 411 IPR033905 GO:0004601|GO:0042744
Viun8g00171 412 PRINTS Plant peroxidase signature 144 164 IPR000823 GO:0004601|GO:0006979|GO:0020037
Viun8g00171 412 PRINTS Plant peroxidase signature 386 399 IPR000823 GO:0004601|GO:0006979|GO:0020037
Viun8g00171 412 PRINTS Plant peroxidase signature 184 197 IPR000823 GO:0004601|GO:0006979|GO:0020037
Viun8g00171 412 PRINTS Plant peroxidase signature 120 139 IPR000823 GO:0004601|GO:0006979|GO:0020037
Viun8g00171 412 PRINTS Plant peroxidase signature 269 281 IPR000823 GO:0004601|GO:0006979|GO:0020037
Viun8g00171 412 PRINTS Plant peroxidase signature 328 343 IPR000823 GO:0004601|GO:0006979|GO:0020037
Viun8g00171 412 PRINTS Plant peroxidase signature 222 237 IPR000823 GO:0004601|GO:0006979|GO:0020037
Viun8g00171 412 PRINTS Plant peroxidase signature 203 213 IPR000823 GO:0004601|GO:0006979|GO:0020037
Viun8g00171 412 PRINTS Plant peroxidase signature 344 361 IPR000823 GO:0004601|GO:0006979|GO:0020037
Viun8g00171 412 SUPERFAMILY Heme-dependent peroxidases 110 412 IPR010255 GO:0004601|GO:0006979|GO:0020037
Viun8g00171 412 Gene3D - 115 412 - -
Viun8g00171 412 Pfam Peroxidase 129 376 IPR002016 GO:0004601|GO:0006979|GO:0020037
Viun8g00171 412 ProSitePatterns Peroxidases proximal heme-ligand signature. 270 280 IPR019793 -
Viun8g00171 412 FunFam Peroxidase 114 256 - -
Viun8g00171 412 PRINTS Haem peroxidase superfamily signature 142 156 IPR002016 GO:0004601|GO:0006979|GO:0020037
Viun8g00171 412 PRINTS Haem peroxidase superfamily signature 270 285 IPR002016 GO:0004601|GO:0006979|GO:0020037
Viun8g00171 412 PRINTS Haem peroxidase superfamily signature 204 221 IPR002016 GO:0004601|GO:0006979|GO:0020037
Viun8g00171 412 PRINTS Haem peroxidase superfamily signature 222 234 IPR002016 GO:0004601|GO:0006979|GO:0020037
Viun8g00171 412 PRINTS Haem peroxidase superfamily signature 330 345 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun8g00171 Viun-Chr8 1069330 1071223 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun8g00171 70 412 Peroxidase AT1G44970 70.231 1.81e-178 499
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun8g00171 K00430 - gmx:102660391 615.15