Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun8g00153 ATGGTAAGAGTTTTCTTTTTCTGCCTCATCTCCACGTTCTTATTATCTACACAAGGAACTCTTACTCTTACTCCAAATGAATCAATCCAAGGTAATAAAACCATGGTTTCTTCTGCTGGAACTTTTGAAGCTGGATTCTTCAAGTTTGGAAATTCACAAGGTCAATACTTTTGTATATGGTACAAGAACATATCACCAAAGACTATTGTGTGGGTGGCCAACAGAGATGCCCCAGTGAAAAACTCAACACCATTTTTCACATTAACAGAAGAAGGAGTTCCTGTTATTCGTGATGCCTCAGGGAGTGTTCTGTGGTTCTCCAATTCATCAAGAAATTCTAAGAAACCAGTCATGCAGCTTCTAGATTCCGGAAATCTTGTTGTGCAAGATGGAGACAGCACAAAAGATCTTTTGTGGGAAAGTTTTGACTACCCTGGTGACACTTTCCTTGCAGGAATGAAACTTCGTACAAACTTTGTGTCTGGTCCTTTTAGGTTTCTCACATCTTGGAGAAACGCAGAAGATCCTGGCTTTGGTGAGTTTTCATATCACATAGATGCTCATGGCTTTCCTCAACTGGTTACTACAAAGGGGGAACTTTTGTTCAGTAGAGGAGGGTCATGGATCGGCAATGTTTTCAGTGGAGTTTCATGGAGAAGAATGCTTAGACTCGTAAATTTTTCTCTTGAGATCAACGACAAGGAAGTCATTTACCAATATAAAACCTTAGAGGCTGAAACTATTACTAGGTTAGTGATCAACCCATCTGGTTTTGTGCAACGTTTGTTATGGTCGGGTGGTAGCCGGGGTTGGGAGATTTTATCCACTCGTCCCATGGATCAGTGTGAATATTATGCCTTTTGTGATGTGAATTCACTGTGTAATGTTACCAACTCTCCAAAAATATGTACTTGCTTAGAAGGTTTTGTACCAAAGTTCTATGAAAAGTGGAGTTCACTGAATTGGTCTGGTGGGTGTGTGAGAAGAGTGAATTTGAGTTGTGATGGTGATAGGTTTCGGAAGTACACAGGAATGAAGTTGCCAGACACTTCTTTTTCTTGGTATAACGAGAGTTTGAGCCTTGAGAAATGTGAGAATTTGTGTCTGAAAAACTGTTCTTGCACAGCATATGCAAATATAGATGCAAGTGGGAGAGGGTGCTTGCTTTGGTTTGGTGACATTACTGATTTGAGTAGACACACAGACCAAGGACAAGACATTTACATAAGACTTGAAGCTTCAGAGTTAGATCATGGAGGCAGTAACAAGAGCTTCAATAGCAAGAACATTGCAGGGATAATAGTAAGCATTGTTTTCTTGGTCGTGGTACTTGGATTGGCCACATTCACATATATGAAGAGGAAGAAGCTCGCGAAGAGAGAGGTGCTAAAAATATTTCACTGGAAGTACAAAAGGGAGAAGGAAGATGTGGAGTTATCAACAATATTTGATTTTTCTACCATTTCTGCTGCTACAAATCACTTTTCACCCAGTAACATATTAGGAGAAGGTGGCTTCGGGCCAGTGTACAAGGGTATACTGCAAGATGGGCAAGAGATTGCAGTCAAGAGGCTTGCAAAAACTTCTGAACAAGGAGCAGAGCAGTTCAAGAATGAAGTCATGTTAATGGCAAAACTTCAACATCGAAATCTTATAAAACTTCATGGTTGTTCTACTCACCAAGAAGAAAGGCTCTTGATCTATGAATACATGCATAACAGAAGCTTGGATAACTTCATTTTTGATTCAACGCAAAGCAAACAACTAGATTTGACAAAGCGTCTTCAAATTATTGATGGTATAGCACGAGGGCTACTCTATCTTCACCAAGACTCTAGATTGAGAATCATCCACAGAGATCTCAAAGCCAGCAATATTCTTCTGGACAACGATATGAATCCAAAGATATCAGATTTTGGTTTGGCTAGAACATTTGGAGGAGATCAAGCTGAGGCCAATACAAATAGAGTGATGGGAACATATGGTTATATGCCTCCTGAATATGCTCTCCATGGACATTTTTCAATCAAATCTGATGTATTTAGCTTTGGTGTGATGGTAATGGAGATAATCAGTGGGAGAAAGAATCGGAATTTCCATGACTCTAAGCATCAGCTTAATCTTCTTAGTCATGCATGGAGATTGTGGATTGAAGAAAAGCCATTGGAGCTAATAGATGAGGTATTAGATTATCCAATCACACCACTTGAAATACTGAGATGCATTCATGTGGGTCTGTTGTGTGTGCAACAAACACCACAAAACAGACCAAACATGTCCTCTGTGGTTTTGATGTTGAATGGTGAAAAGGTGTTGCCTGAGCCAACTCCACCTGGGTTCTACACAGGAACAACACAGTTTCCCATTCAGGCAGAATCTTCTTCGAGAAGTTGTGGAGATAGATCACAAAATGAAGTTACAGTGTCCTTGTTACAGCCACGGTAG 2445 0.4012 MVRVFFFCLISTFLLSTQGTLTLTPNESIQGNKTMVSSAGTFEAGFFKFGNSQGQYFCIWYKNISPKTIVWVANRDAPVKNSTPFFTLTEEGVPVIRDASGSVLWFSNSSRNSKKPVMQLLDSGNLVVQDGDSTKDLLWESFDYPGDTFLAGMKLRTNFVSGPFRFLTSWRNAEDPGFGEFSYHIDAHGFPQLVTTKGELLFSRGGSWIGNVFSGVSWRRMLRLVNFSLEINDKEVIYQYKTLEAETITRLVINPSGFVQRLLWSGGSRGWEILSTRPMDQCEYYAFCDVNSLCNVTNSPKICTCLEGFVPKFYEKWSSLNWSGGCVRRVNLSCDGDRFRKYTGMKLPDTSFSWYNESLSLEKCENLCLKNCSCTAYANIDASGRGCLLWFGDITDLSRHTDQGQDIYIRLEASELDHGGSNKSFNSKNIAGIIVSIVFLVVVLGLATFTYMKRKKLAKREVLKIFHWKYKREKEDVELSTIFDFSTISAATNHFSPSNILGEGGFGPVYKGILQDGQEIAVKRLAKTSEQGAEQFKNEVMLMAKLQHRNLIKLHGCSTHQEERLLIYEYMHNRSLDNFIFDSTQSKQLDLTKRLQIIDGIARGLLYLHQDSRLRIIHRDLKASNILLDNDMNPKISDFGLARTFGGDQAEANTNRVMGTYGYMPPEYALHGHFSIKSDVFSFGVMVMEIISGRKNRNFHDSKHQLNLLSHAWRLWIEEKPLELIDEVLDYPITPLEILRCIHVGLLCVQQTPQNRPNMSSVVLMLNGEKVLPEPTPPGFYTGTTQFPIQAESSSRSCGDRSQNEVTVSLLQPR 814
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun8g00153 814 Gene3D - 16 142 IPR036426 -
Viun8g00153 814 ProSiteProfiles Bulb-type lectin domain profile. 20 141 IPR001480 -
Viun8g00153 814 SMART serkin_6 495 742 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun8g00153 814 SUPERFAMILY alpha-D-mannose-specific plant lectins 69 176 IPR036426 -
Viun8g00153 814 ProSiteProfiles Protein kinase domain profile. 495 772 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun8g00153 814 SMART blect_4 26 145 IPR001480 -
Viun8g00153 814 CDD B_lectin 26 145 IPR001480 -
Viun8g00153 814 Pfam Protein tyrosine and serine/threonine kinase 499 763 IPR001245 GO:0004672|GO:0006468
Viun8g00153 814 ProSiteProfiles PAN/Apple domain profile. 334 412 IPR003609 -
Viun8g00153 814 Gene3D Phosphorylase Kinase; domain 1 468 570 - -
Viun8g00153 814 Pfam PAN-like domain 334 397 IPR003609 -
Viun8g00153 814 PIRSF SRK 1 814 IPR024171 GO:0004674
Viun8g00153 814 Gene3D Hepatocyte Growth Factor 332 413 - -
Viun8g00153 814 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 458 570 - -
Viun8g00153 814 Pfam S-locus glycoprotein domain 204 313 IPR000858 GO:0048544
Viun8g00153 814 ProSitePatterns Serine/Threonine protein kinases active-site signature. 616 628 IPR008271 GO:0004672|GO:0006468
Viun8g00153 814 SMART ntp_6 334 411 IPR003609 -
Viun8g00153 814 CDD PAN_AP_plant 330 411 - -
Viun8g00153 814 Gene3D Transferase(Phosphotransferase) domain 1 571 772 - -
Viun8g00153 814 CDD STKc_IRAK 501 768 - -
Viun8g00153 814 SUPERFAMILY Protein kinase-like (PK-like) 480 780 IPR011009 -
Viun8g00153 814 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 5 757 - -
Viun8g00153 814 Pfam D-mannose binding lectin 68 171 IPR001480 -
Viun8g00153 814 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 571 774 - -
Viun8g00153 814 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 16 142 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun8g00153 Viun-Chr8 993410 996980 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun8g00153 426 794 Receptor kinase-like Gene Family AT4G23190 50.781 1.26e-126 390
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Viun8g00153 PK_Tyr_Ser-Thr 4.6e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun8g00153 - - var:108337036 1546.95